Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G033900 Manihot esculenta HOM05D012769 ORTHO05D011556 1.6e-42 175.6 84 100.0
Manes.09G033825 Manihot esculenta HOM05D012769 ORTHO05D010698 4.0e-30 134.4 61 96.7
Manes.09G034100 Manihot esculenta HOM05D012769 ORTHO05D011556 3.2e-27 124.8 74 86.5
Potri.009G162300 Populus trichocarpa HOM05D012769 ORTHO05D011556 4.4e-13 77.8 84 50.0
Sabra06G0146500 Salix brachista HOM05D012769 ORTHO05D010698 5.8e-13 77.4 69 49.3
Manes.09G034200 Manihot esculenta HOM05D012769 ORTHO05D010698 1.3e-12 76.3 87 49.4
Potri.004G201100 Populus trichocarpa HOM05D012769 ORTHO05D011556 2.2e-12 75.5 72 52.8
Manes.09G034600 Manihot esculenta HOM05D012769 ORTHO05D010698 2.7e-10 68.6 84 45.2
Cpa.g.sc152.38 Carica papaya HOM05D012769 ORTHO05D010698 3.0e-09 65.1 83 34.9
Cpa.g.sc152.42 Carica papaya HOM05D012769 ORTHO05D010698 3.0e-09 65.1 83 34.9
Carub.0007s2598 Capsella rubella HOM05D010807 ORTHO05D010698 1.1e-08 63.2 88 39.8
Manes.09G034000 Manihot esculenta HOM05D012769 ORTHO05D010698 1.9e-08 62.4 85 44.7
THA.LOC104820250 Tarenaya hassleriana HOM05D010807 ORTHO05D010698 2.5e-08 62.0 92 38.0
AL7G39660 Arabidopsis lyrata HOM05D010807 ORTHO05D010698 5.6e-08 60.8 85 38.8
Thecc.09G269400 Theobroma cacao HOM05D011381 ORTHO05D011556 5.6e-08 60.8 75 40.0
AT4G15733 Arabidopsis thaliana HOM05D010807 ORTHO05D010698 1.6e-07 59.3 85 36.5
Thhalv10026885m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 1.6e-07 59.3 83 38.6
Gohir.D13G058500 Gossypium hirsutum HOM05D011381 ORTHO05D011556 1.6e-07 59.3 84 36.9
Gohir.D10G135600 Gossypium hirsutum HOM05D011381 ORTHO05D011556 2.1e-07 58.9 73 35.6
Gohir.D13G058700 Gossypium hirsutum HOM05D011381 ORTHO05D011556 2.8e-07 58.5 84 38.1
Gorai.013G066100 Gossypium raimondii HOM05D011381 ORTHO05D011556 2.8e-07 58.5 84 38.1
Gohir.D13G058400 Gossypium hirsutum HOM05D011381 ORTHO05D011556 3.6e-07 58.2 84 36.9
Glyma.18G277700 Glycine max HOM05D015479 ORTHO05D011556 6.2e-07 57.4 90 34.4
Gohir.A13G063500 Gossypium hirsutum HOM05D011381 ORTHO05D011556 6.2e-07 57.4 84 36.9
Gorai.011G150400 Gossypium raimondii HOM05D011381 ORTHO05D011556 6.2e-07 57.4 73 34.2
Gorai.013G065900 Gossypium raimondii HOM05D011381 ORTHO05D011556 6.2e-07 57.4 84 35.7
Gohir.D13G058600 Gossypium hirsutum HOM05D011381 ORTHO05D011556 8.1e-07 57.0 84 36.9
Glyma.11G033700 Glycine max HOM05D015479 ORTHO05D011556 1.1e-06 56.6 72 40.3
Gorai.013G065800 Gossypium raimondii HOM05D011381 ORTHO05D011556 1.1e-06 56.6 84 35.7
AT4G15735 Arabidopsis thaliana HOM05D010807 ORTHO05D010698 1.8e-06 55.8 60 45.0
BolC8t48301H Brassica oleracea HOM05D010807 ORTHO05D010698 1.8e-06 55.8 60 45.0
Phvul.008G023100 Phaseolus vulgaris HOM05D015479 ORTHO05D011556 1.8e-06 55.8 85 34.1
AL7G39650 Arabidopsis lyrata HOM05D010807 ORTHO05D010698 2.4e-06 55.5 60 45.0
CARHR290170 Cardamine hirsuta HOM05D010807 ORTHO05D010698 3.1e-06 55.1 58 46.6
Peaxi162Scf00078g00744 Petunia axillaris HOM05D013488 ORTHO05D015723 3.1e-06 55.1 80 36.2
Phvul.008G023300 Phaseolus vulgaris HOM05D015479 ORTHO05D011556 3.1e-06 55.1 74 43.2
Migut.C01344 Erythranthe guttata HOM05D065055 ORTHO05D045305 4.0e-06 54.7 84 39.3
Glyma.08G254850 Glycine max HOM05D015479 ORTHO05D011556 4.0e-06 54.7 86 34.9
SHI10073 Sapria himalayana HOM05D012769 ORTHO05D010698 5.2e-06 54.3 76 38.2
Gorai.013G066000 Gossypium raimondii HOM05D011381 ORTHO05D011556 6.9e-06 53.9 71 36.6
Thhalv10026975m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 9.0e-06 53.5 95 35.8
Thhalv10027303m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 9.0e-06 53.5 83 36.1
Peaxi162Scf00078g00746 Petunia axillaris HOM05D013488 ORTHO05D015723 9.0e-06 53.5 80 35.0


User provided reference genes

Program Settings