Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G033825 Manihot esculenta HOM05D012769 ORTHO05D010698 5.5e-46 187.2 89 100.0
Manes.09G033900 Manihot esculenta HOM05D012769 ORTHO05D011556 5.5e-30 134.0 61 96.7
Manes.09G034100 Manihot esculenta HOM05D012769 ORTHO05D011556 1.4e-17 92.8 51 86.3
Sabra06G0146500 Salix brachista HOM05D012769 ORTHO05D010698 5.2e-12 74.3 90 41.1
Potri.004G201100 Populus trichocarpa HOM05D012769 ORTHO05D011556 8.9e-12 73.6 62 54.8
Potri.009G162300 Populus trichocarpa HOM05D012769 ORTHO05D011556 3.4e-11 71.6 62 56.5
Cpa.g.sc152.38 Carica papaya HOM05D012769 ORTHO05D010698 3.7e-10 68.2 89 41.6
Cpa.g.sc152.42 Carica papaya HOM05D012769 ORTHO05D010698 3.7e-10 68.2 89 41.6
Manes.09G034200 Manihot esculenta HOM05D012769 ORTHO05D010698 1.6e-08 62.8 59 50.8
THA.LOC104820250 Tarenaya hassleriana HOM05D010807 ORTHO05D010698 2.7e-08 62.0 61 49.2
Thhalv10026885m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 7.8e-08 60.5 87 39.1
Carub.0007s2598 Capsella rubella HOM05D010807 ORTHO05D010698 1.7e-07 59.3 64 43.8
AT4G15733 Arabidopsis thaliana HOM05D010807 ORTHO05D010698 3.9e-07 58.2 87 36.8
AL7G39660 Arabidopsis lyrata HOM05D010807 ORTHO05D010698 6.6e-07 57.4 72 40.3
Aa31LG10G6400 Aethionema arabicum HOM05D010807 ORTHO05D010698 8.6e-07 57.0 91 35.2
BolC8t48301H Brassica oleracea HOM05D010807 ORTHO05D010698 1.5e-06 56.2 60 46.7
Gohir.D10G135600 Gossypium hirsutum HOM05D011381 ORTHO05D011556 1.5e-06 56.2 64 39.1
Gohir.D13G058500 Gossypium hirsutum HOM05D011381 ORTHO05D011556 1.5e-06 56.2 62 43.5
Thecc.09G269400 Theobroma cacao HOM05D011381 ORTHO05D011556 1.9e-06 55.8 86 37.2
AT4G15735 Arabidopsis thaliana HOM05D010807 ORTHO05D010698 2.5e-06 55.5 60 43.3
CARHR290170 Cardamine hirsuta HOM05D010807 ORTHO05D010698 2.5e-06 55.5 58 48.3
Thhalv10027303m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 2.5e-06 55.5 75 40.0
Manes.09G034600 Manihot esculenta HOM05D012769 ORTHO05D010698 2.5e-06 55.5 83 38.6
SHI10073 Sapria himalayana HOM05D012769 ORTHO05D010698 2.5e-06 55.5 56 42.9
AL7G39650 Arabidopsis lyrata HOM05D010807 ORTHO05D010698 3.3e-06 55.1 60 43.3
Thhalv10026975m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 3.3e-06 55.1 60 45.0
Thhalv10027327m.g Eutrema salsugineum HOM05D010807 ORTHO05D010698 3.3e-06 55.1 60 45.0
Gorai.011G150400 Gossypium raimondii HOM05D011381 ORTHO05D011556 3.3e-06 55.1 62 38.7
Phvul.008G023100 Phaseolus vulgaris HOM05D015479 ORTHO05D011556 4.3e-06 54.7 61 41.0
Glyma.18G277700 Glycine max HOM05D015479 ORTHO05D011556 5.6e-06 54.3 62 43.5
Gohir.A13G063500 Gossypium hirsutum HOM05D011381 ORTHO05D011556 5.6e-06 54.3 62 41.9
Gorai.013G065900 Gossypium raimondii HOM05D011381 ORTHO05D011556 5.6e-06 54.3 62 41.9
Phvul.008G023300 Phaseolus vulgaris HOM05D015479 ORTHO05D011556 5.6e-06 54.3 60 48.3
Peaxi162Scf00078g00744 Petunia axillaris HOM05D013488 ORTHO05D015723 7.3e-06 53.9 57 47.4
Gohir.D13G058600 Gossypium hirsutum HOM05D011381 ORTHO05D011556 9.5e-06 53.5 62 41.9
Gohir.D13G058700 Gossypium hirsutum HOM05D011381 ORTHO05D011556 9.5e-06 53.5 62 41.9
Gorai.013G066000 Gossypium raimondii HOM05D011381 ORTHO05D011556 9.5e-06 53.5 62 41.9
Gorai.013G066100 Gossypium raimondii HOM05D011381 ORTHO05D011556 9.5e-06 53.5 62 41.9
Manes.09G034000 Manihot esculenta HOM05D012769 ORTHO05D010698 9.5e-06 53.5 81 37.0


User provided reference genes

Program Settings