Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G022200 Manihot esculenta HOM05D007273 ORTHO05D009230 6.7e-142 507.3 249 100.0
Sabra06G0036200 Salix brachista HOM05D007273 ORTHO05D009230 6.8e-86 321.2 238 68.9
Potri.006G051600 Populus trichocarpa HOM05D007273 ORTHO05D009230 1.9e-83 313.2 234 68.8
TWI74G1215 Tripterygium wilfordii HOM05D007273 ORTHO05D009230 3.3e-80 302.4 234 66.7
Gorai.006G136300 Gossypium raimondii HOM05D007273 ORTHO05D009230 7.1e-75 284.6 231 64.1
Thecc.05G153100 Theobroma cacao HOM05D007273 ORTHO05D009230 2.7e-74 282.7 241 62.7
Gohir.D09G118000 Gossypium hirsutum HOM05D007273 ORTHO05D009230 3.5e-74 282.3 231 63.6
Gohir.A09G121900 Gossypium hirsutum HOM05D007273 ORTHO05D009230 1.3e-73 280.4 236 62.3
COL.COLO4_28286 Corchorus olitorius HOM05D007273 ORTHO05D009230 5.1e-73 278.5 226 65.5
Cfa016813 Carpinus fangiana HOM05D007273 ORTHO05D009230 8.7e-73 277.7 230 63.9
Haze_19853 Corylus avellana HOM05D007273 ORTHO05D009230 1.5e-72 276.9 231 63.2
CANSAT80G2704 Cannabis sativa HOM05D007273 ORTHO05D009230 5.6e-72 275.0 245 61.2
Medtr7g091490 Medicago truncatula HOM05D007273 ORTHO05D009230 7.3e-72 274.6 232 62.5
CANSAT80G0412 Cannabis sativa HOM05D007273 ORTHO05D009230 2.1e-71 273.1 245 60.0
Lj1g0021019 Lotus japonicus HOM05D007273 ORTHO05D009230 2.8e-71 272.7 236 61.0
CiPaw.09G038500 Carya illinoinensis HOM05D007273 ORTHO05D009230 4.7e-71 271.9 228 64.5
Psat3g072760 Pisum sativum HOM05D007273 ORTHO05D009230 1.8e-70 270.0 226 62.8
RcHm_v2.0_Chr3g0482541 Rosa chinensis HOM05D007273 ORTHO05D009230 4.0e-70 268.9 234 63.2
Phvul.001G131900 Phaseolus vulgaris HOM05D007273 ORTHO05D009230 1.5e-69 266.9 246 60.2
Ca_08456_v3 Cicer arietinum L. HOM05D007273 ORTHO05D009230 5.8e-69 265.0 226 62.8
Carub.0004s2403 Capsella rubella HOM05D007273 ORTHO05D009230 1.7e-68 263.5 247 59.5
Prupe.7G059600 Prunus persica HOM05D007273 ORTHO05D009230 1.7e-68 263.5 227 61.7
Eucgr.A02345 Eucalyptus grandis HOM05D007273 ORTHO05D009230 2.9e-68 262.7 238 59.2
Ciclev10033324m.g Citrus clementina HOM05D007273 ORTHO05D009230 4.9e-68 261.9 235 62.6
BcaNung02834 Brassica carinata HOM05D007273 ORTHO05D009230 6.4e-68 261.5 230 61.7
Glyma.03G136600 Glycine max HOM05D007273 ORTHO05D009230 6.4e-68 261.5 235 63.4
ClCG04G000150 Citrullus lanatus HOM05D007273 ORTHO05D009230 8.4e-68 261.2 227 61.7
CsaV3_4G011670 Cucumis sativus L. HOM05D007273 ORTHO05D009230 1.1e-67 260.8 223 63.7
VMungo1383G0084 Vigna mungo HOM05D007273 ORTHO05D009230 1.1e-67 260.8 240 60.0
Cpa.g.sc92.54 Carica papaya HOM05D007273 ORTHO05D009230 7.1e-67 258.1 220 65.5
Lalb_Chr01g0017311 Lupinus albus HOM05D007273 ORTHO05D009230 7.1e-67 258.1 234 58.1
arahy.Tifrunner.gnm1.ann1.J7IQUN Arachis hypogaea HOM05D007273 ORTHO05D009230 9.3e-67 257.7 222 60.4
A05p02510 Brassica napus HOM05D007273 ORTHO05D009230 1.6e-66 256.9 231 61.9
C04p02970 Brassica napus HOM05D007273 ORTHO05D009230 1.6e-66 256.9 226 61.9
BraA05t19244Z Brassica rapa HOM05D007273 ORTHO05D009230 1.6e-66 256.9 231 61.9
THA.LOC104802102 Tarenaya hassleriana HOM05D007273 ORTHO05D009230 1.6e-66 256.9 234 60.3
Thhalv10017127m.g Eutrema salsugineum HOM05D007273 ORTHO05D009230 2.1e-66 256.5 230 60.9
BolC4t21937H Brassica oleracea HOM05D003650 ORTHO05D004213 1.0e-65 254.2 244 58.2
FvH4_6g23860 Fragaria vesca HOM05D007273 ORTHO05D009230 1.3e-65 253.8 234 60.3
FAN05G2271 Fragaria x ananassa HOM05D007273 ORTHO05D009230 1.7e-65 253.4 234 60.3
AL4G40060 Arabidopsis lyrata HOM05D007273 ORTHO05D009230 1.1e-64 250.8 235 59.1
AT2G41750 Arabidopsis thaliana HOM05D007273 ORTHO05D009230 1.1e-64 250.8 235 59.1
Sp4g24020 Schrenkiella parvula HOM05D007273 ORTHO05D009230 2.5e-64 249.6 231 59.3
QL07p000584 Quercus lobata HOM05D007273 ORTHO05D009230 1.3e-63 247.3 241 57.3
Aa31LG1G23760 Aethionema arabicum HOM05D007273 ORTHO05D009230 9.0e-62 241.1 238 56.7
PGR004G1947 Punica granatum HOM05D007273 ORTHO05D009230 9.0e-62 241.1 204 63.7
CARHR136850 Cardamine hirsuta HOM05D007273 ORTHO05D009230 7.6e-61 238.0 237 55.7
Sed0019353 Sechium edule HOM05D007273 ORTHO05D009230 2.2e-60 236.5 229 57.2
Actinidia39224 Actinidia chinensis HOM05D007273 ORTHO05D009230 1.6e-55 220.3 245 52.7
Dinv12487 Davidia involucrata HOM05D007273 ORTHO05D009230 1.6e-55 220.3 245 51.4
Migut.J01756 Erythranthe guttata HOM05D007273 ORTHO05D009230 1.6e-55 220.3 238 52.5
MSTRG.6428 Avicennia marina HOM05D007273 ORTHO05D009230 1.1e-54 217.6 237 49.8
vmacro07848 Vaccinium macrocarpon HOM05D007273 ORTHO05D009230 2.4e-54 216.5 240 52.9
SGA_v2.0_scaffold69G23119 Striga asiatica HOM05D007273 ORTHO05D009230 3.1e-54 216.1 248 49.2
Lsat_1_v5_gn_9_29100 Lactuca sativa HOM05D007273 ORTHO05D009230 4.0e-54 215.7 244 50.0
TAR369G0984 Trochodendron aralioides HOM05D007273 ORTHO05D009230 4.0e-54 215.7 245 51.0
Rhsim03G0024900 Rhododendron simsii HOM05D007273 ORTHO05D009230 5.3e-54 215.3 240 51.7
Nn2g15217 Nelumbo nucifera HOM05D007273 ORTHO05D009230 6.9e-54 214.9 238 52.1
SalBow6G5536 Salvia bowleyana HOM05D007273 ORTHO05D009230 2.6e-53 213.0 235 48.5
PGSC0003DMG401001308 Solanum tuberosum HOM05D007273 ORTHO05D009230 1.7e-52 210.3 230 50.0
EL10Ac3g07092 Beta vulgaris HOM05D007273 ORTHO05D009230 8.4e-52 208.0 236 50.4
Solyc02g087600.3 Solanum lycopersicum HOM05D007273 ORTHO05D009230 2.4e-51 206.5 230 49.6
HanXRQChr05g0128781 Helianthus annuus HOM05D007273 ORTHO05D009230 3.2e-51 206.1 242 50.0
Oeu017941.1 Olea europaea HOM05D007273 ORTHO05D009230 3.2e-51 206.1 258 46.5
CAN.G417.4 Capsicum annuum HOM05D007273 ORTHO05D009230 5.5e-51 205.3 229 50.7
Aqoxy1G00330 Aquilegia oxysepala HOM05D007273 ORTHO05D009230 1.6e-50 203.8 236 52.5
Sopen02g032350 Solanum pennellii HOM05D007273 ORTHO05D009230 2.1e-50 203.4 230 49.1
Nitab4.5_0000082g0140 Nicotiana tabacum HOM05D007273 ORTHO05D009230 2.3e-49 199.9 256 45.3
Peaxi162Scf00002g02715 Petunia axillaris HOM05D007273 ORTHO05D009230 3.9e-49 199.1 230 49.6
DCAR_003245 Daucus carota HOM05D007273 ORTHO05D009230 1.1e-48 197.6 242 49.2
Rhsim03G0024700 Rhododendron simsii HOM05D007273 ORTHO05D009230 1.9e-48 196.8 268 45.1
ECA247G0394 Erigeron canadensis HOM05D007273 ORTHO05D009230 2.5e-48 196.4 231 47.6
Sc25g0005300 Simmondsia chinensis HOM05D007273 ORTHO05D009230 2.5e-48 196.4 234 48.3
AUR62026041 Chenopodium quinoa HOM05D007273 ORTHO05D009230 3.3e-48 196.1 233 47.2
Cc06_g17580 Coffea canephora HOM05D007273 ORTHO05D009230 7.4e-48 194.9 248 46.4
AUR62024452 Chenopodium quinoa HOM05D007273 ORTHO05D009230 1.6e-47 193.7 247 46.6
PSO384G4400 Papaver somniferum HOM05D007273 ORTHO05D009230 1.8e-46 190.3 243 48.1
Nitab4.5_0010316g0010 Nicotiana tabacum HOM05D007273 ORTHO05D009230 2.6e-45 186.4 246 45.5
PSO339G1789 Papaver somniferum HOM05D007273 ORTHO05D009230 3.4e-45 186.0 243 47.7
HPP92_016047 Vanilla planifolia HOM05D007273 ORTHO05D009230 1.6e-42 177.2 244 43.9
SEGI_31103 Sequoiadendron giganteum HOM05D007273 ORTHO05D009230 2.0e-37 160.2 242 40.9
MBI17_g14625_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 7.6e-37 158.3 232 43.5
Mapoly0023s0152 Marchantia polymorpha HOM05D007273 ORTHO05D009230 5.5e-35 152.1 289 35.3
FAN02G1642 Fragaria x ananassa HOM05D007273 ORTHO05D009230 7.2e-35 151.8 138 58.0
FAN09G1358 Fragaria x ananassa HOM05D007273 ORTHO05D009230 1.2e-34 151.0 169 56.2
ATR0626G250 Amborella trichopoda HOM05D007273 ORTHO05D009230 4.6e-34 149.1 338 33.7
Os12g0142600 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 6.7e-33 145.2 251 40.6
Os11g0145100 Oryza sativa ssp. japonica HOM05D007273 ORTHO05D009230 8.8e-33 144.8 251 40.2
Rhsim03G0024400 Rhododendron simsii HOM05D007273 ORTHO05D009230 4.3e-32 142.5 132 58.3
Pp3c17_17160 Physcomitrium patens HOM05D007273 ORTHO05D009230 8.2e-31 138.3 288 34.7
Rhsim03G0024300 Rhododendron simsii HOM05D007273 ORTHO05D009230 8.2e-31 138.3 132 56.8
MBI17_g36895_MAGBIO Magnolia biondii HOM05D007273 ORTHO05D009230 1.0e-28 131.3 164 50.0
unitig_8.g4551 Utricularia gibba HOM05D007273 ORTHO05D009230 5.5e-27 125.6 105 61.0
Zm00001eb163370 Zea mays HOM05D007273 ORTHO05D009230 4.7e-26 122.5 223 37.2
Glyma.19G139000 Glycine max HOM05D007273 ORTHO05D009230 1.1e-24 117.9 91 70.3
SMO240G0020 Selaginella moellendorffii HOM05D007273 ORTHO05D009230 3.3e-24 116.3 191 41.9
Hma1.2p1_1611F.1_g293550 Hydrangea macrophylla HOM05D007273 ORTHO05D009230 2.4e-22 110.2 152 43.4
Lju124C41T6 Lonicera japonica HOM05D007273 ORTHO05D009230 1.5e-21 107.5 90 60.0
AagrBONN_evm.TU.Sc2ySwM_228.793 Anthoceros agrestis HOM05D007273 ORTHO05D009230 1.7e-20 104.0 185 38.4
Ah.04g151620 Amaranthus hybridus HOM05D007273 ORTHO05D009230 4.7e-18 95.9 225 34.2
CSS0001142 Camellia sinensis var. sinensis HOM05D007273 ORTHO05D009230 2.6e-13 80.1 96 47.9
Rhsim03G0023900 Rhododendron simsii HOM05D007273 ORTHO05D009230 5.9e-13 79.0 132 39.4
Actinidia09327 Actinidia chinensis HOM05D007273 ORTHO05D009230 2.6e-08 63.5 110 38.2
TWI39G0907 Tripterygium wilfordii HOM05D007003 ORTHO05D008499 1.3e-07 61.2 271 25.1
TPR.G3731 Trifolium pratense HOM05D007273 ORTHO05D009230 2.8e-07 60.1 51 62.7
MCO07G627 Micromonas commoda HOM05D007273 ORTHO05D009230 7.0e-06 55.5 221 23.1


User provided reference genes

Program Settings