Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 5.8e-112 407.5 198 100.0
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 2.3e-76 289.3 227 63.4
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 8.7e-76 287.3 211 67.8
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 3.3e-75 285.4 224 63.4
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 5.6e-75 284.6 212 68.9
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 7.3e-75 284.3 227 63.9
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 2.1e-74 282.7 222 64.0
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 1.1e-73 280.4 222 62.2
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 2.4e-73 279.3 222 64.0
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 2.4e-73 279.3 222 64.0
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 5.3e-73 278.1 226 63.3
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 9.0e-73 277.3 213 64.3
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 1.5e-72 276.6 226 61.9
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 2.2e-71 272.7 224 59.8
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 2.2e-71 272.7 224 61.6
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 3.8e-71 271.9 224 62.5
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 1.1e-70 270.4 220 61.4
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 1.4e-70 270.0 205 66.8
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 7.1e-70 267.7 222 58.1
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 2.1e-69 266.2 222 60.8
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 2.7e-69 265.8 214 63.6
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 4.6e-69 265.0 221 59.3
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 1.0e-68 263.8 208 60.6
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 1.3e-68 263.5 224 61.6
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 1.8e-68 263.1 211 64.5
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 3.0e-68 262.3 224 57.6
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 3.0e-68 262.3 221 58.8
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 1.1e-67 260.4 224 61.2
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 1.1e-67 260.4 222 57.2
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 1.9e-67 259.6 211 60.2
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 1.9e-67 259.6 199 64.3
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 3.3e-67 258.8 228 57.0
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 4.3e-67 258.5 222 56.8
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 7.4e-67 257.7 223 58.3
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 2.1e-66 256.1 214 61.7
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 4.8e-66 255.0 219 60.7
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 1.1e-65 253.8 230 55.2
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 2.4e-65 252.7 227 58.1
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 2.4e-65 252.7 213 60.6
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 2.4e-65 252.7 213 59.2
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 6.9e-65 251.1 207 60.4
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 6.9e-65 251.1 205 60.0
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 6.9e-65 251.1 219 57.5
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 6.9e-65 251.1 213 60.1
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 9.0e-65 250.8 204 59.3
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 9.0e-65 250.8 225 56.4
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 1.2e-64 250.4 206 57.3
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 4.5e-64 248.4 212 59.4
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 4.5e-64 248.4 212 59.0
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 4.5e-64 248.4 216 54.2
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 1.7e-63 246.5 223 56.1
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 1.7e-63 246.5 211 57.8
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 2.2e-63 246.1 209 56.0
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 4.9e-63 245.0 229 54.6
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 4.9e-63 245.0 229 55.0
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 8.4e-63 244.2 230 55.2
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 8.4e-63 244.2 223 55.6
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 1.9e-62 243.0 195 60.0
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 3.2e-62 242.3 210 57.6
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 1.6e-61 240.0 209 54.5
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 2.1e-61 239.6 209 54.1
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 2.1e-61 239.6 211 56.4
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 3.5e-61 238.8 211 57.3
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 3.5e-61 238.8 219 53.9
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 6.0e-61 238.0 216 52.3
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 1.3e-60 236.9 215 56.3
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 1.8e-60 236.5 223 51.6
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 2.3e-60 236.1 223 51.6
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 2.3e-60 236.1 245 50.6
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 3.0e-60 235.7 213 59.2
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 8.7e-60 234.2 217 51.6
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 1.9e-59 233.0 216 54.6
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 1.9e-59 233.0 216 54.6
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 3.3e-59 232.3 222 54.5
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 4.3e-59 231.9 214 54.2
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 9.6e-59 230.7 222 52.7
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 1.6e-58 229.9 208 56.2
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 2.1e-58 229.6 229 48.9
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 3.7e-58 228.8 222 53.2
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 4.8e-58 228.4 188 60.6
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 8.2e-58 227.6 210 54.8
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 6.9e-57 224.6 185 58.9
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 1.4e-54 216.9 198 54.0
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 3.0e-52 209.1 139 75.5
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 1.9e-51 206.5 196 54.1
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 2.8e-50 202.6 178 61.2
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 3.1e-49 199.1 159 63.5
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 5.9e-48 194.9 153 62.1
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 1.4e-46 190.3 139 63.3
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 1.6e-45 186.8 211 47.4
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 3.6e-45 185.7 135 62.2
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 1.0e-44 184.1 204 47.5
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 3.9e-44 182.2 172 53.5
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 6.7e-44 181.4 201 46.8
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 5.7e-43 178.3 137 64.2
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 2.8e-42 176.0 240 43.3
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 2.3e-36 156.4 210 41.4
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 2.7e-29 132.9 130 56.2
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 1.0e-28 131.0 92 64.1
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 8.8e-28 127.9 188 36.7
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 2.0e-27 126.7 97 61.9
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 5.7e-27 125.2 212 34.4
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 5.7e-27 125.2 200 35.0
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 3.7e-26 122.5 81 69.1
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 1.3e-23 114.0 108 56.5
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 2.1e-21 106.7 94 50.0
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 4.1e-17 92.4 86 50.0
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 4.0e-12 75.9 67 52.2
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 5.2e-12 75.5 98 38.8
Rhsim03G0024500 Rhododendron simsii HOM05D007137 ORTHO05D008982 5.9e-08 62.0 59 49.2


User provided reference genes

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