Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 9.9e-156 553.5 303 100.0
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 4.9e-38 162.5 252 48.4
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 1.1e-37 161.4 243 51.4
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 7.1e-37 158.7 239 48.5
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 1.3e-35 154.5 248 46.4
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 1.9e-34 150.6 239 46.9
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 9.6e-34 148.3 215 47.4
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 1.3e-33 147.9 239 45.2
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 1.3e-33 147.9 253 47.0
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 2.8e-33 146.7 271 43.5
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 5.8e-31 139.0 181 54.1
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 1.9e-29 134.0 176 49.4
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 1.9e-29 134.0 176 49.4
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 3.2e-29 133.3 253 42.7
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 4.2e-29 132.9 250 41.6
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 2.1e-28 130.6 243 42.0
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 2.1e-28 130.6 198 48.0
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 2.7e-28 130.2 217 46.5
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 3.5e-28 129.8 176 47.7
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 6.0e-28 129.0 241 42.3
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 7.9e-28 128.6 253 44.3
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 2.3e-27 127.1 284 39.8
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 3.9e-27 126.3 269 44.2
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 3.9e-27 126.3 246 43.1
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 8.7e-27 125.2 241 41.9
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 1.9e-26 124.0 234 44.0
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 2.5e-26 123.6 247 42.1
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 3.3e-26 123.2 236 42.4
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 5.7e-26 122.5 246 39.0
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 7.4e-26 122.1 244 41.0
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 1.6e-25 120.9 242 43.0
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 1.6e-25 120.9 217 43.3
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 4.8e-25 119.4 255 39.2
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 4.8e-25 119.4 210 40.5
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 8.2e-25 118.6 149 51.7
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 2.4e-24 117.1 157 51.6
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 4.1e-24 116.3 245 41.6
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 9.0e-24 115.2 268 38.4
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 1.2e-23 114.8 243 39.9
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 3.4e-23 113.2 242 37.2
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 5.9e-23 112.5 221 44.8
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 3.8e-22 109.8 236 40.3
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 3.8e-22 109.8 212 42.0
SHI15744 Sapria himalayana HOM05D007490 ORTHO05D008750 5.0e-22 109.4 257 38.9
Actinidia39227 Actinidia chinensis HOM05D007490 ORTHO05D008750 1.1e-21 108.2 220 44.1
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 1.9e-21 107.5 119 59.7
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 2.5e-21 107.1 245 38.0
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 1.2e-20 104.8 250 37.6
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 1.2e-20 104.8 242 36.4
VMungo0720G0884 Vigna mungo HOM05D007490 ORTHO05D008750 1.6e-20 104.4 225 42.2
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 2.1e-20 104.0 245 38.0
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 6.1e-20 102.4 123 59.3
Psat6g119920 Pisum sativum HOM05D007490 ORTHO05D008750 1.0e-19 101.7 230 38.7
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 1.4e-19 101.3 257 36.2
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 1.8e-19 100.9 244 37.3
Ca_26016_v3 Cicer arietinum L. HOM05D007490 ORTHO05D008750 1.8e-19 100.9 230 43.0
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 3.9e-19 99.8 257 35.0
Phvul.007G252900 Phaseolus vulgaris HOM05D007490 ORTHO05D008750 5.1e-19 99.4 234 39.7
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 5.1e-19 99.4 238 37.4
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 6.7e-19 99.0 251 36.7
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 8.8e-19 98.6 312 33.0
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 1.1e-18 98.2 181 41.4
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 3.3e-18 96.7 260 38.1
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 9.7e-18 95.1 241 37.8
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 9.7e-18 95.1 275 34.2
TAR636G1914 Trochodendron aralioides HOM05D007490 ORTHO05D008750 1.3e-17 94.7 160 49.4
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 3.7e-17 93.2 175 40.6
THA.LOC104804865 Tarenaya hassleriana HOM05D007490 ORTHO05D008750 4.8e-17 92.8 237 38.4
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 8.2e-17 92.0 189 41.3
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 1.1e-16 91.7 194 37.6
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 1.4e-16 91.3 206 39.3
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.4e-16 91.3 121 47.9
Medtr0100s0190 Medicago truncatula HOM05D007490 ORTHO05D008750 1.4e-16 91.3 230 39.1
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 6.9e-16 89.0 149 44.3
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 6.9e-16 89.0 181 40.3
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 4.5e-15 86.3 205 38.0
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 4.5e-15 86.3 127 47.2
TPR.G10631 Trifolium pratense HOM05D007490 ORTHO05D008750 4.5e-15 86.3 226 38.1
BraA09t40485Z Brassica rapa HOM05D014273 ORTHO05D008750 5.9e-15 85.9 219 37.9
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 1.7e-14 84.3 179 40.2
Duzib205G1398 Durio zibethinus HOM05D007490 ORTHO05D008750 2.9e-14 83.6 211 39.3
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 2.9e-14 83.6 171 40.4
Oeu033005.1 Olea europaea HOM05D007490 ORTHO05D008750 3.8e-14 83.2 224 37.1
Lj5g0014197 Lotus japonicus HOM05D007490 ORTHO05D008750 1.9e-13 80.9 240 37.9
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 9.4e-13 78.6 207 34.3
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 9.4e-13 78.6 63 60.3
PSO339G3404 Papaver somniferum HOM05D007490 ORTHO05D008750 4.7e-12 76.3 190 35.3
Solyc10g080140.2 Solanum lycopersicum HOM05D015445 ORTHO05D008750 5.1e-11 72.8 234 38.9
PSO384G3220 Papaver somniferum HOM05D007490 ORTHO05D008750 1.1e-10 71.6 289 31.1
PGSC0003DMG400023724 Solanum tuberosum HOM05D015445 ORTHO05D008750 2.0e-10 70.9 242 37.2
FAN02G3575 Fragaria x ananassa HOM05D007490 ORTHO05D008750 2.8e-09 67.0 229 33.2
MD14G1067100 Malus domestica HOM05D007490 ORTHO05D008750 1.1e-08 65.1 60 58.3
SEGI_37898 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 9.1e-08 62.0 44 63.6
SEGI_24459 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 1.5e-07 61.2 74 44.6
BolC8t50896H Brassica oleracea HOM05D014273 ORTHO05D041832 2.6e-07 60.5 181 35.9
Lalb_Chr21g0316471 Lupinus albus HOM05D007490 ORTHO05D008750 4.5e-07 59.7 113 45.1


User provided reference genes

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