Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G020501 Manihot esculenta HOM05D007908 ORTHO05D009653 2.2e-179 632.1 307 100.0
TWI15G0389 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 1.7e-41 174.1 338 37.6
Sabra15G0112800 Salix brachista HOM05D005223 ORTHO05D000001 2.8e-41 173.3 311 38.6
TWI18G0422 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 4.8e-41 172.6 352 37.2
TWI77G1008 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 4.8e-41 172.6 351 37.0
Ciclev10010619m.g Citrus clementina HOM05D007908 ORTHO05D009653 1.0e-38 164.9 218 47.2
Ca_03884_v3 Cicer arietinum L. HOM05D007908 ORTHO05D009653 5.0e-38 162.5 276 42.4
Rhsim05G0128700 Rhododendron simsii HOM05D007908 ORTHO05D009653 1.9e-37 160.6 325 36.3
TWI73G0060 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 7.2e-37 158.7 309 37.2
PSO063G3207 Papaver somniferum HOM05D007908 ORTHO05D009653 1.6e-31 141.0 261 35.2
Hma1.2p1_0362F.1_g136380 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 4.5e-31 139.4 230 39.6
Potri.006G109250 Populus trichocarpa HOM05D007908 ORTHO05D009653 1.3e-30 137.9 248 37.1
CiPaw.14G112700 Carya illinoinensis HOM05D007908 ORTHO05D009653 2.2e-30 137.1 245 36.7
Hma1.2p1_1664F.1_g296430 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 2.2e-30 137.1 230 40.0
Hma1.2p1_3592F.1_g336930 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 6.5e-30 135.6 219 40.6
CiPaw.07G046700 Carya illinoinensis HOM05D007908 ORTHO05D009653 8.5e-30 135.2 246 37.8
TWI18G0694 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 1.9e-29 134.0 205 41.5
TWI38G1015 Tripterygium wilfordii HOM05D007908 ORTHO05D009653 1.9e-29 134.0 266 38.0
Potri.004G133001 Populus trichocarpa HOM05D007908 ORTHO05D009653 3.2e-29 133.3 248 35.9
CiPaw.01G307800 Carya illinoinensis HOM05D007908 ORTHO05D009653 3.6e-28 129.8 246 34.6
Ciclev10003571m.g Citrus clementina HOM05D007908 ORTHO05D009653 1.8e-27 127.5 176 46.6
Nn4g25076 Nelumbo nucifera HOM05D000414 ORTHO05D009653 1.8e-27 127.5 310 34.8
TAR237G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.8e-27 127.5 279 34.1
Rhsim06G0128500 Rhododendron simsii HOM05D007908 ORTHO05D009653 1.1e-24 118.2 296 30.4
Sopen11g024190 Solanum pennellii HOM05D000002 ORTHO05D009653 1.4e-24 117.9 141 44.7
Rhsim11G0061100 Rhododendron simsii HOM05D007908 ORTHO05D009653 2.4e-24 117.1 229 34.5
Nn7g36623 Nelumbo nucifera HOM05D000793 ORTHO05D001191 5.9e-23 112.5 192 39.1
Rhsim11G0062800 Rhododendron simsii HOM05D007908 ORTHO05D009653 5.9e-23 112.5 208 35.6
Hma1.2p1_0303F.1_g118800 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 6.6e-22 109.0 337 29.7
Rhsim13G0148200 Rhododendron simsii HOM05D007908 ORTHO05D009653 6.6e-22 109.0 262 30.9
RhsimUnG0157400 Rhododendron simsii HOM05D007908 ORTHO05D009653 6.6e-22 109.0 262 30.9
CiPaw.04G138200 Carya illinoinensis HOM05D007908 ORTHO05D009653 8.6e-22 108.6 193 37.3
Rhsim05G0013600 Rhododendron simsii HOM05D007908 ORTHO05D009653 1.9e-21 107.5 263 30.8
CiPaw.12G035000 Carya illinoinensis HOM05D007908 ORTHO05D009653 4.3e-21 106.3 209 37.3
Nn2g14544 Nelumbo nucifera HOM05D007908 ORTHO05D009653 2.1e-20 104.0 132 43.9
PSO210G6349 Papaver somniferum HOM05D007908 ORTHO05D009653 1.7e-17 94.4 161 36.6
PSO339G2863 Papaver somniferum HOM05D007908 ORTHO05D009653 1.7e-17 94.4 161 36.6
VMungo0720G1130 Vigna mungo HOM05D024021 ORTHO05D009653 1.7e-17 94.4 110 50.9
Ciclev10006991m.g Citrus clementina HOM05D007908 ORTHO05D009653 2.2e-17 94.0 103 50.5
PSO210G6560 Papaver somniferum HOM05D007908 ORTHO05D009653 2.2e-17 94.0 161 36.6
Sopen05g014460 Solanum pennellii HOM05D007908 ORTHO05D009653 2.2e-17 94.0 185 33.0
Rhsim04G0131100 Rhododendron simsii HOM05D007908 ORTHO05D009653 3.5e-15 86.7 129 40.3
VMungo1383G2888 Vigna mungo HOM05D007908 ORTHO05D009653 5.9e-15 85.9 104 47.1
CiPaw.05G144600 Carya illinoinensis HOM05D007908 ORTHO05D009653 1.0e-14 85.1 85 49.4
CiPaw.03G001800 Carya illinoinensis HOM05D007908 ORTHO05D009653 5.0e-14 82.8 130 40.0
RhsimUnG0057000 Rhododendron simsii HOM05D007908 ORTHO05D009653 8.6e-14 82.0 263 28.1
PGSC0003DMG400015663 Solanum tuberosum HOM05D007908 ORTHO05D009653 5.6e-13 79.3 125 39.2
Sopen05g015960 Solanum pennellii HOM05D000002 ORTHO05D000001 9.5e-13 78.6 108 40.7
CiPaw.16G100000 Carya illinoinensis HOM05D007908 ORTHO05D009653 2.1e-12 77.4 111 36.9
Hma1.2p1_1137F.1_g260710 Hydrangea macrophylla HOM05D007908 ORTHO05D009653 4.7e-12 76.3 230 28.3
TPR.G30342 Trifolium pratense HOM05D007908 ORTHO05D009653 1.0e-11 75.1 64 53.1
TPR.G34217 Trifolium pratense HOM05D007908 ORTHO05D009653 4.0e-11 73.2 71 47.9
Sopen12g017110 Solanum pennellii HOM05D007908 ORTHO05D009653 7.5e-10 68.9 136 34.6
PSO782G2577 Papaver somniferum HOM05D000002 ORTHO05D004756 9.8e-10 68.6 342 24.0
CAN.G541.33 Capsicum annuum HOM05D007908 ORTHO05D009653 1.3e-09 68.2 197 30.5
MELO3C031197.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.3e-09 68.2 250 25.6
Ciclev10010781m.g Citrus clementina HOM05D007908 ORTHO05D009653 3.7e-09 66.6 98 36.7
Ciclev10017758m.g Citrus clementina HOM05D007908 ORTHO05D009653 4.9e-09 66.2 92 39.1
PSO832G4452 Papaver somniferum HOM05D007908 ORTHO05D009653 4.9e-09 66.2 107 37.4
SHI36897 Sapria himalayana HOM05D000002 ORTHO05D004756 4.9e-09 66.2 248 26.2
Ciclev10013850m.g Citrus clementina HOM05D007908 ORTHO05D009653 8.3e-09 65.5 94 39.4
COL.COLO4_36632 Corchorus olitorius HOM05D000002 ORTHO05D004756 8.3e-09 65.5 207 26.6
CAN.G4.42 Capsicum annuum HOM05D007908 ORTHO05D000001 1.1e-08 65.1 232 30.2
MELO3C029836.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.1e-08 65.1 86 43.0
TPR.G17073 Trifolium pratense HOM05D000002 ORTHO05D009653 2.4e-08 63.9 86 43.0
CiPaw.04G038600 Carya illinoinensis HOM05D007908 ORTHO05D009653 4.1e-08 63.2 77 44.2
Ciclev10006515m.g Citrus clementina HOM05D007908 ORTHO05D009653 4.1e-08 63.2 92 38.0
SHI40782 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-08 63.2 219 25.1
Ciclev10026957m.g Citrus clementina HOM05D007908 ORTHO05D009653 5.4e-08 62.8 84 42.9
QL10p052423 Quercus lobata HOM05D000002 ORTHO05D000001 5.4e-08 62.8 321 23.4
SHI39742 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-08 62.4 248 25.8
SHI49499 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-08 62.4 247 25.9
CiPaw.11G050700 Carya illinoinensis HOM05D007908 ORTHO05D009653 9.2e-08 62.0 95 40.0
SHI04462 Sapria himalayana HOM05D000002 ORTHO05D004756 9.2e-08 62.0 247 25.1
CAN.G504.51 Capsicum annuum HOM05D001206 ORTHO05D002068 1.6e-07 61.2 101 34.7
TPR.G9895 Trifolium pratense HOM05D007908 ORTHO05D009653 1.6e-07 61.2 103 35.0
TWI73G0803 Tripterygium wilfordii HOM05D007230 ORTHO05D004756 2.0e-07 60.8 262 23.3
CAN.G65.34 Capsicum annuum HOM05D000147 ORTHO05D009653 2.7e-07 60.5 98 34.7
SHI03432 Sapria himalayana HOM05D007230 ORTHO05D004756 2.7e-07 60.5 248 26.2
QL04p097278 Quercus lobata HOM05D000002 ORTHO05D000001 3.5e-07 60.1 321 23.1
Psat1g026880 Pisum sativum HOM05D007230 ORTHO05D004756 4.6e-07 59.7 222 26.1
QL11p016059 Quercus lobata HOM05D000002 ORTHO05D000001 4.6e-07 59.7 321 23.1
PSO754G0013 Papaver somniferum HOM05D007230 ORTHO05D004756 1.0e-06 58.5 233 23.6
Ca_19570_v3 Cicer arietinum L. HOM05D007908 ORTHO05D009653 1.7e-06 57.8 72 50.0
MELO3C030814.2 Cucumis melo HOM05D007230 ORTHO05D004756 1.7e-06 57.8 175 26.9
Lj2C729G11 Lonicera japonica HOM05D001145 ORTHO05D009653 1.7e-06 57.8 96 35.4
SHI28040 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-06 57.8 184 26.1
CAN.G183.8 Capsicum annuum HOM05D007908 ORTHO05D009653 2.3e-06 57.4 104 37.5
SHI02527 Sapria himalayana HOM05D007230 ORTHO05D004756 3.0e-06 57.0 184 26.1
CiPaw.03G222100 Carya illinoinensis HOM05D007908 ORTHO05D009653 3.9e-06 56.6 93 35.5
Ciclev10023357m.g Citrus clementina HOM05D007908 ORTHO05D009653 3.9e-06 56.6 92 37.0
PSO832G0254 Papaver somniferum HOM05D007230 ORTHO05D004756 3.9e-06 56.6 204 25.5
QL02p069342 Quercus lobata HOM05D000002 ORTHO05D000001 5.0e-06 56.2 310 23.5
SHI06223 Sapria himalayana HOM05D000002 ORTHO05D000001 5.0e-06 56.2 191 25.7
Rhsim11G0082000 Rhododendron simsii HOM05D008652 ORTHO05D010516 6.6e-06 55.8 152 28.3
SHI18717 Sapria himalayana HOM05D007230 ORTHO05D004756 6.6e-06 55.8 211 25.6
SHI50483 Sapria himalayana HOM05D000002 ORTHO05D000001 6.6e-06 55.8 239 25.1
COL.COLO4_04631 Corchorus olitorius HOM05D007230 ORTHO05D022123 8.6e-06 55.5 84 36.9
SHI09402 Sapria himalayana HOM05D007230 ORTHO05D004756 8.6e-06 55.5 206 25.7
SHI17244 Sapria himalayana HOM05D007230 ORTHO05D004756 8.6e-06 55.5 182 25.8


User provided reference genes

Program Settings