Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G014201 Manihot esculenta HOM05D009046 ORTHO05D010499 2.8e-58 228.4 114 100.0
Manes.09G012601 Manihot esculenta HOM05D009046 ORTHO05D010499 1.4e-30 136.3 92 70.7
Thecc.04G174900 Theobroma cacao HOM05D009046 ORTHO05D010499 1.5e-16 89.7 101 45.5
Thecc.04G174700 Theobroma cacao HOM05D009046 ORTHO05D010499 2.6e-16 89.0 99 45.5
Thecc.04G174500 Theobroma cacao HOM05D009046 ORTHO05D010499 2.2e-15 85.9 99 45.5
QL09p042742 Quercus lobata HOM05D009046 ORTHO05D010499 3.2e-14 82.0 100 43.0
Thecc.04G176200 Theobroma cacao HOM05D009046 ORTHO05D010499 4.2e-14 81.6 85 44.7
QL09p025537 Quercus lobata HOM05D009046 ORTHO05D010499 5.4e-14 81.3 100 42.0
Cfa015893 Carpinus fangiana HOM05D009046 ORTHO05D010499 3.5e-13 78.6 110 41.8
QL09p042663 Quercus lobata HOM05D009046 ORTHO05D010499 3.5e-13 78.6 67 52.2
QL09p042668 Quercus lobata HOM05D009046 ORTHO05D010499 3.5e-13 78.6 68 52.9
QL07p032500 Quercus lobata HOM05D011519 ORTHO05D010499 7.9e-13 77.4 84 47.6
Atru.chr2.2398 Acer truncatum HOM05D009046 ORTHO05D010499 3.0e-12 75.5 82 47.6
Cpa.g.sc3.422 Carica papaya HOM05D009046 ORTHO05D010499 3.0e-12 75.5 110 40.9
QL07p032484 Quercus lobata HOM05D009046 ORTHO05D010499 3.0e-12 75.5 71 50.7
Cpa.g.c34620 Carica papaya HOM05D009046 ORTHO05D010499 3.9e-12 75.1 68 52.9
QL09p042594 Quercus lobata HOM05D009046 ORTHO05D010499 1.5e-11 73.2 60 51.7
Cfa017052 Carpinus fangiana HOM05D009046 ORTHO05D010499 7.4e-11 70.9 98 39.8
Ciclev10023880m.g Citrus clementina HOM05D009046 ORTHO05D010499 9.6e-11 70.5 65 55.4
Nn2g10332 Nelumbo nucifera HOM05D009046 ORTHO05D010499 2.1e-10 69.3 111 38.7
COL.COLO4_20670 Corchorus olitorius HOM05D009046 ORTHO05D010499 2.8e-10 68.9 102 41.2
Potri.013G054600 Populus trichocarpa HOM05D009046 ORTHO05D010499 2.4e-09 65.9 61 49.2
Cpa.g.sc3.420 Carica papaya HOM05D009046 ORTHO05D010499 6.9e-09 64.3 79 41.8
Manes.09G132801 Manihot esculenta HOM05D009046 ORTHO05D010499 6.9e-09 64.3 107 34.6
Haze_21160 Corylus avellana HOM05D009046 ORTHO05D010499 9.0e-09 63.9 70 44.3
Prupe.2G131400 Prunus persica HOM05D009046 ORTHO05D010499 9.0e-09 63.9 109 34.9
COL.COLO4_33068 Corchorus olitorius HOM05D009046 ORTHO05D010499 1.2e-08 63.5 105 37.1
Prupe.8G072300 Prunus persica HOM05D011519 ORTHO05D010499 1.2e-08 63.5 86 43.0
Prupe.8G072400 Prunus persica HOM05D011519 ORTHO05D010499 1.2e-08 63.5 63 44.4
Prupe.2G131600 Prunus persica HOM05D009046 ORTHO05D010499 1.5e-08 63.2 109 34.9
Prupe.2G131500 Prunus persica HOM05D009046 ORTHO05D010499 2.0e-08 62.8 115 33.9
Cpa.g.sc34.167 Carica papaya HOM05D009046 ORTHO05D010499 9.9e-08 60.5 77 41.6
COL.COLO4_33059 Corchorus olitorius HOM05D009046 ORTHO05D010499 4.9e-07 58.2 105 37.1
TAR633G0605 Trochodendron aralioides HOM05D012974 ORTHO05D012969 4.9e-07 58.2 100 35.0
Cpa.g.sc76.56 Carica papaya HOM05D009046 ORTHO05D010499 6.4e-07 57.8 80 37.5
FvH4_6g10090 Fragaria vesca HOM05D019556 ORTHO05D017924 4.2e-06 55.1 72 40.3
FAN14G4714 Fragaria x ananassa HOM05D019556 ORTHO05D017924 4.2e-06 55.1 72 40.3
FAN11G1022 Fragaria x ananassa HOM05D041136 ORTHO05D010499 5.5e-06 54.7 72 38.9
FAN09G0582 Fragaria x ananassa HOM05D011519 ORTHO05D010499 7.1e-06 54.3 104 32.7
PGR119G0114 Punica granatum HOM05D009046 ORTHO05D010499 7.1e-06 54.3 74 40.5


User provided reference genes

Program Settings