Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G011000 Manihot esculenta HOM05D005503 ORTHO05D008949 6.3e-73 277.3 139 100.0
Potri.006G047800 Populus trichocarpa HOM05D005503 ORTHO05D008949 5.6e-37 157.9 141 59.6
CiPaw.10G036000 Carya illinoinensis HOM05D005503 ORTHO05D008949 1.6e-36 156.4 146 61.6
Sabra06G0033300 Salix brachista HOM05D005503 ORTHO05D008949 6.2e-36 154.5 141 58.9
Potri.016G044001 Populus trichocarpa HOM05D005503 ORTHO05D008949 1.1e-32 143.7 109 66.1
GSVIVG01005042001 Vitis vinifera HOM05D005503 ORTHO05D008949 7.1e-32 141.0 134 59.0
FvH4_6g24610 Fragaria vesca HOM05D005503 ORTHO05D008949 2.7e-31 139.0 131 60.3
FAN14G5504 Fragaria x ananassa HOM05D005503 ORTHO05D008949 2.7e-31 139.0 131 60.3
QL07p004035 Quercus lobata HOM05D005503 ORTHO05D008949 2.7e-31 139.0 126 58.7
Prupe.7G052400 Prunus persica HOM05D005503 ORTHO05D008949 3.5e-31 138.7 142 56.3
Duzib093G0766 Durio zibethinus HOM05D005503 ORTHO05D008949 4.6e-31 138.3 141 54.6
CANSAT80G2315 Cannabis sativa HOM05D005503 ORTHO05D008949 3.0e-30 135.6 142 57.0
Atru.chr1.1203 Acer truncatum HOM05D005503 ORTHO05D008949 1.5e-29 133.3 139 55.4
FAN09G2222 Fragaria x ananassa HOM05D005503 ORTHO05D008949 1.5e-29 133.3 131 58.0
MD12G1083400 Malus domestica HOM05D005503 ORTHO05D008949 1.5e-29 133.3 136 56.6
Haze_19781 Corylus avellana HOM05D005503 ORTHO05D008949 4.3e-29 131.7 123 60.2
Nn2g15105 Nelumbo nucifera HOM05D005503 ORTHO05D008949 5.6e-29 131.3 137 55.5
RcHm_v2.0_Chr3g0483941 Rosa chinensis HOM05D005503 ORTHO05D008949 5.6e-29 131.3 132 59.1
FAN05G5816 Fragaria x ananassa HOM05D005503 ORTHO05D008949 7.3e-29 131.0 118 61.9
FAN02G3508 Fragaria x ananassa HOM05D005503 ORTHO05D008949 9.5e-29 130.6 118 61.9
Thecc.05G146600 Theobroma cacao HOM05D005503 ORTHO05D008949 2.1e-28 129.4 141 54.6
Ciclev10006881m.g Citrus clementina HOM05D005503 ORTHO05D008949 2.8e-28 129.0 136 52.2
TAR636G0173 Trochodendron aralioides HOM05D005503 ORTHO05D008949 2.8e-28 129.0 142 51.4
Duzib128G0213 Durio zibethinus HOM05D005503 ORTHO05D008949 3.6e-28 128.6 138 51.4
Gohir.D09G116600 Gossypium hirsutum HOM05D005503 ORTHO05D008949 4.0e-27 125.2 138 52.2
Gorai.006G134900 Gossypium raimondii HOM05D005503 ORTHO05D008949 4.0e-27 125.2 138 52.2
Gohir.A09G120500 Gossypium hirsutum HOM05D005503 ORTHO05D008949 6.8e-27 124.4 138 52.2
Cpa.g.sc1079.1 Carica papaya HOM05D005503 ORTHO05D008949 1.2e-26 123.6 128 55.5
PGR004G2205 Punica granatum HOM05D005503 ORTHO05D008949 1.5e-26 123.2 109 61.5
Rhsim03G0032200 Rhododendron simsii HOM05D005503 ORTHO05D008949 2.0e-26 122.9 127 56.7
COL.COLO4_36524 Corchorus olitorius HOM05D005503 ORTHO05D008949 3.4e-26 122.1 138 50.7
TPR.G7098 Trifolium pratense HOM05D005503 ORTHO05D008949 4.4e-26 121.7 113 59.3
Psat3g074800 Pisum sativum HOM05D005503 ORTHO05D008949 1.3e-25 120.2 72 81.9
Dinv39668 Davidia involucrata HOM05D005503 ORTHO05D008949 2.9e-25 119.0 132 55.3
Glyma.03G133400 Glycine max HOM05D005503 ORTHO05D008949 2.9e-25 119.0 145 51.7
Medtr7g090930 Medicago truncatula HOM05D005503 ORTHO05D008949 3.7e-25 118.6 72 80.6
TWI77G0247 Tripterygium wilfordii HOM05D005503 ORTHO05D008949 3.7e-25 118.6 90 66.7
Lalb_Chr20g0110371 Lupinus albus HOM05D005503 ORTHO05D008949 4.9e-25 118.2 66 86.4
Lalb_Chr20g0115621 Lupinus albus HOM05D005503 ORTHO05D008949 4.9e-25 118.2 64 89.1
Lsat_1_v5_gn_9_32141 Lactuca sativa HOM05D005503 ORTHO05D008949 6.4e-25 117.9 74 77.0
vmacro21945 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 6.4e-25 117.9 131 54.2
Phvul.001G128900 Phaseolus vulgaris HOM05D005503 ORTHO05D008949 8.4e-25 117.5 146 49.3
VMungo1383G2568 Vigna mungo HOM05D005503 ORTHO05D008949 1.9e-24 116.3 64 85.9
Aqoxy2G00233 Aquilegia oxysepala HOM05D005503 ORTHO05D008949 2.4e-24 115.9 67 80.6
Ca_22958_v3 Cicer arietinum L. HOM05D005503 ORTHO05D008949 3.2e-24 115.5 72 79.2
Lj1g0008024 Lotus japonicus HOM05D005503 ORTHO05D008949 3.2e-24 115.5 103 60.2
arahy.Tifrunner.gnm1.ann1.Z9GIA8 Arachis hypogaea HOM05D005503 ORTHO05D008949 4.1e-24 115.2 74 79.7
Eucgr.A02305 Eucalyptus grandis HOM05D005503 ORTHO05D008949 4.1e-24 115.2 140 50.0
Glyma.19G135200 Glycine max HOM05D005503 ORTHO05D008949 5.4e-24 114.8 144 51.4
CSS0039750 Camellia sinensis var. sinensis HOM05D005503 ORTHO05D008949 1.2e-23 113.6 125 53.6
ECA247G0412 Erigeron canadensis HOM05D005503 ORTHO05D008949 2.1e-23 112.8 138 50.0
MELO3C009814.2 Cucumis melo HOM05D005503 ORTHO05D008949 2.7e-23 112.5 108 57.4
Hma1.2p1_0110F.1_g052960 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 2.7e-23 112.5 134 54.5
Actinidia39197 Actinidia chinensis HOM05D005503 ORTHO05D008949 3.5e-23 112.1 136 53.7
MBI13_g26145_MAGBIO Magnolia biondii HOM05D005503 ORTHO05D008949 4.6e-23 111.7 72 73.6
CsaV3_3G040800 Cucumis sativus L. HOM05D005503 ORTHO05D008949 6.0e-23 111.3 104 59.6
ClCG10G015610 Citrullus lanatus HOM05D005503 ORTHO05D008949 1.0e-22 110.5 104 60.6
CDE09G0956 Ceratophyllum demersum HOM05D003424 ORTHO05D004025 3.0e-22 109.0 111 55.0
arahy.Tifrunner.gnm1.ann1.BJA8E7 Arachis hypogaea HOM05D005503 ORTHO05D008949 3.9e-22 108.6 147 49.7
HanXRQChr10g0298211 Helianthus annuus HOM05D005503 ORTHO05D008949 3.9e-22 108.6 71 74.6
Oeu006918.1 Olea europaea HOM05D005503 ORTHO05D008949 3.9e-22 108.6 133 50.4
Hund24647 Selenicereus undatus HOM05D005503 ORTHO05D008949 3.9e-22 108.6 72 73.6
ATR0721G098 Amborella trichopoda HOM05D005503 ORTHO05D008949 5.1e-22 108.2 65 76.9
Sc13g0001540 Simmondsia chinensis HOM05D005503 ORTHO05D008949 6.6e-22 107.8 65 78.5
EL10Ac3g07150 Beta vulgaris HOM05D005503 ORTHO05D008949 1.9e-21 106.3 125 48.8
Aa31LG1G21320 Aethionema arabicum HOM05D005503 ORTHO05D008949 4.3e-21 105.1 133 48.1
Ah.13g077080 Amaranthus hybridus HOM05D005503 ORTHO05D008949 4.3e-21 105.1 80 68.8
Cc06_g18190 Coffea canephora HOM05D005503 ORTHO05D008949 5.6e-21 104.8 138 47.8
Sed0013086 Sechium edule HOM05D005503 ORTHO05D008949 5.6e-21 104.8 63 79.4
DCAR_020514 Daucus carota HOM05D005503 ORTHO05D008949 7.3e-21 104.4 126 50.0
Thhalv10016002m.g Eutrema salsugineum HOM05D005503 ORTHO05D008949 7.3e-21 104.4 109 56.0
CARHR209280 Cardamine hirsuta HOM05D005503 ORTHO05D008949 3.6e-20 102.1 112 55.4
Oeu033023.1 Olea europaea HOM05D005503 ORTHO05D008949 3.6e-20 102.1 99 55.6
Carub.0006s0293 Capsella rubella HOM05D005503 ORTHO05D008949 4.7e-20 101.7 63 77.8
A10p32120 Brassica napus HOM05D005503 ORTHO05D008949 8.1e-20 100.9 121 50.4
BraA10t45255Z Brassica rapa HOM05D005503 ORTHO05D008949 8.1e-20 100.9 121 50.4
Nitab4.5_0001618g0220 Nicotiana tabacum HOM05D005503 ORTHO05D008949 1.1e-19 100.5 119 49.6
C09p72840 Brassica napus HOM05D005503 ORTHO05D008949 1.4e-19 100.1 121 51.2
BolC9t60020H Brassica oleracea HOM05D005503 ORTHO05D008949 1.4e-19 100.1 121 51.2
AUR62024521 Chenopodium quinoa HOM05D005503 ORTHO05D008949 1.4e-19 100.1 135 45.2
Solyc04g016420.3 Solanum lycopersicum HOM05D005503 ORTHO05D008949 2.4e-19 99.4 87 60.9
Nitab4.5_0000826g0100 Nicotiana tabacum HOM05D005503 ORTHO05D008949 4.0e-19 98.6 69 68.1
PGSC0003DMG400012701 Solanum tuberosum HOM05D005503 ORTHO05D008949 4.0e-19 98.6 98 52.0
THA.LOC104816402 Tarenaya hassleriana HOM05D005503 ORTHO05D008949 4.0e-19 98.6 133 49.6
AL6G13590 Arabidopsis lyrata HOM05D005503 ORTHO05D008949 6.8e-19 97.8 63 74.6
AT5G04000 Arabidopsis thaliana HOM05D005503 ORTHO05D008949 8.9e-19 97.4 104 55.8
Dinv18679 Davidia involucrata HOM05D005503 ORTHO05D008949 8.9e-19 97.4 68 70.6
Migut.J01714 Erythranthe guttata HOM05D005503 ORTHO05D008949 8.9e-19 97.4 61 77.0
Peaxi162Scf00130g00911 Petunia axillaris HOM05D005503 ORTHO05D008949 1.2e-18 97.1 79 63.3
Ah.04g151390 Amaranthus hybridus HOM05D005503 ORTHO05D008949 1.5e-18 96.7 61 75.4
Sp6g38760 Schrenkiella parvula HOM05D005503 ORTHO05D008949 2.6e-18 95.9 130 47.7
Sopen04g008520 Solanum pennellii HOM05D005503 ORTHO05D008949 2.6e-18 95.9 129 45.0
BcaC06g32102 Brassica carinata HOM05D005503 ORTHO05D008949 3.4e-18 95.5 134 46.3
unitig_22.g6053 Utricularia gibba HOM05D005503 ORTHO05D008949 7.6e-18 94.4 78 60.3
CAN.G1237.11 Capsicum annuum HOM05D005503 ORTHO05D008949 9.9e-18 94.0 122 44.3
HPP92_027974 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.3e-17 93.6 65 66.2
Zm00001eb291660 Zea mays HOM05D005503 ORTHO05D008949 3.8e-17 92.0 125 43.2
SGA_v2.0_scaffold69G23127 Striga asiatica HOM05D005503 ORTHO05D008949 6.4e-17 91.3 86 61.6
DCAR_013615 Daucus carota HOM05D005503 ORTHO05D008949 8.4e-17 90.9 94 57.4
SalBow6G3706 Salvia bowleyana HOM05D005503 ORTHO05D008949 2.4e-16 89.4 81 58.0
SalBow6G4155 Salvia bowleyana HOM05D005503 ORTHO05D008949 2.4e-16 89.4 81 58.0
Os05g0496000 Oryza sativa ssp. japonica HOM05D005503 ORTHO05D008949 5.4e-16 88.2 71 59.2
PSO063G5603 Papaver somniferum HOM05D005503 ORTHO05D008949 9.3e-16 87.4 84 58.3
vmacro21963 Vaccinium macrocarpon HOM05D005503 ORTHO05D008949 2.5e-13 79.3 57 70.2
Hma1.2p1_0005F.1_g004410 Hydrangea macrophylla HOM05D005503 ORTHO05D008949 2.1e-12 76.3 66 62.1
HPP92_018218 Vanilla planifolia HOM05D005503 ORTHO05D008949 1.8e-11 73.2 50 64.0
Mapoly0048s0063 Marchantia polymorpha HOM05D005503 ORTHO05D008949 5.3e-11 71.6 82 46.3
Rhsim04G0037200 Rhododendron simsii HOM05D005503 ORTHO05D008949 4.6e-07 58.5 87 44.8
Rhsim04G0170300 Rhododendron simsii HOM05D005503 ORTHO05D008949 4.6e-07 58.5 87 44.8


User provided reference genes

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