Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.09G003300 Manihot esculenta HOM05D008349 ORTHO05D010116 5.0e-43 177.6 102 100.0
Manes.08G060951 Manihot esculenta HOM05D008349 ORTHO05D010116 9.8e-31 136.7 103 69.9
Potri.016G034950 Populus trichocarpa HOM05D008349 ORTHO05D010116 5.2e-24 114.4 103 62.1
Nn7g36871 Nelumbo nucifera HOM05D008349 ORTHO05D010116 4.9e-22 107.8 102 53.9
Potri.006G036700 Populus trichocarpa HOM05D008349 ORTHO05D010116 9.2e-21 103.6 105 59.0
QL07p011743 Quercus lobata HOM05D008349 ORTHO05D010116 1.1e-18 96.7 101 53.5
Thecc.05G124300 Theobroma cacao HOM05D008349 ORTHO05D010116 1.1e-18 96.7 103 52.4
CiPaw.09G049400 Carya illinoinensis HOM05D008349 ORTHO05D010116 1.4e-16 89.7 103 54.4
CiPaw.10G041900 Carya illinoinensis HOM05D008349 ORTHO05D010116 2.3e-16 89.0 103 52.4
Dinv22212 Davidia involucrata HOM05D008349 ORTHO05D010116 9.2e-13 77.0 102 46.1
Cfa019988 Carpinus fangiana HOM05D008349 ORTHO05D010116 1.2e-12 76.6 94 52.1
Prupe.7G031000 Prunus persica HOM05D008349 ORTHO05D010116 1.6e-12 76.3 103 45.6
TAR622G0427 Trochodendron aralioides HOM05D008349 ORTHO05D010116 2.7e-12 75.5 84 51.2
TAR633G0966 Trochodendron aralioides HOM05D008349 ORTHO05D010116 2.7e-12 75.5 84 51.2
QL01p016614 Quercus lobata HOM05D008349 ORTHO05D010116 7.8e-12 73.9 96 47.9
Sabra16G0037400 Salix brachista HOM05D008349 ORTHO05D010116 5.0e-11 71.2 92 48.9
EL10Ac3g07259 Beta vulgaris HOM05D008349 ORTHO05D010116 8.6e-11 70.5 94 43.6
Dinv21476 Davidia involucrata HOM05D001268 ORTHO05D010116 4.3e-10 68.2 91 49.5
Cpa.g.sc92.87 Carica papaya HOM05D008349 ORTHO05D010116 1.6e-09 66.2 106 44.3
CiPaw.13G148400 Carya illinoinensis HOM05D008349 ORTHO05D010116 2.8e-09 65.5 103 39.8
Medtr7g089320 Medicago truncatula HOM05D008349 ORTHO05D010116 4.7e-09 64.7 89 43.8
Rhsim04G0113000 Rhododendron simsii HOM05D008349 ORTHO05D010116 4.7e-09 64.7 100 44.0
Hma1.2p1_0460F.1_g157620 Hydrangea macrophylla HOM05D008349 ORTHO05D010116 6.2e-09 64.3 93 39.8
Phvul.001G120900 Phaseolus vulgaris HOM05D008349 ORTHO05D010116 5.2e-08 61.2 73 45.2
CANSAT64G0841 Cannabis sativa HOM05D008349 ORTHO05D010116 1.5e-07 59.7 104 40.4
TPR.G16083 Trifolium pratense HOM05D008349 ORTHO05D010116 1.5e-07 59.7 35 68.6
COL.COLO4_23432 Corchorus olitorius HOM05D008349 ORTHO05D010116 5.8e-07 57.8 106 34.9
Glyma.19G128400 Glycine max HOM05D008349 ORTHO05D010116 9.8e-07 57.0 72 44.4
Gohir.A13G002000 Gossypium hirsutum HOM05D008349 ORTHO05D010116 9.8e-07 57.0 97 39.2
Gohir.D13G001400 Gossypium hirsutum HOM05D008349 ORTHO05D010116 9.8e-07 57.0 97 39.2
Gorai.013G001300 Gossypium raimondii HOM05D008349 ORTHO05D010116 9.8e-07 57.0 97 39.2
Lalb_Chr22g0357621 Lupinus albus HOM05D008349 ORTHO05D010116 2.2e-06 55.8 104 36.5
Potri.009G068800 Populus trichocarpa HOM05D008349 ORTHO05D010116 2.2e-06 55.8 92 38.0
Lalb_Chr24g0400421 Lupinus albus HOM05D008349 ORTHO05D010116 2.9e-06 55.5 83 39.8
Aqoxy2G00445 Aquilegia oxysepala HOM05D008349 ORTHO05D010116 4.9e-06 54.7 105 32.4
Atru.chr1.1408 Acer truncatum HOM05D008349 ORTHO05D010116 6.4e-06 54.3 39 71.8
Sabra09G0051800 Salix brachista HOM05D008349 ORTHO05D010116 6.4e-06 54.3 90 38.9


User provided reference genes

Program Settings