Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G172801 Manihot esculenta HOM05D007193 ORTHO05D008972 3.8e-168 594.7 296 100.0
Potri.016G132500 Populus trichocarpa HOM05D007193 ORTHO05D008972 3.3e-55 219.5 410 38.0
Duzib151G0002 Durio zibethinus HOM05D007193 ORTHO05D008972 9.7e-55 218.0 417 39.1
Duzib212G0445 Durio zibethinus HOM05D007193 ORTHO05D008972 6.9e-53 211.8 415 37.3
Dinv11397 Davidia involucrata HOM05D007193 ORTHO05D008972 5.0e-51 205.7 404 36.9
QL07p033223 Quercus lobata HOM05D007193 ORTHO05D008972 6.5e-51 205.3 400 38.2
Sabra04G0150400 Salix brachista HOM05D007193 ORTHO05D008972 8.5e-51 204.9 396 36.4
Prupe.4G286300 Prunus persica HOM05D007193 ORTHO05D008972 2.3e-48 196.8 420 36.7
GSVIVG01030223001 Vitis vinifera HOM05D007193 ORTHO05D008972 1.5e-47 194.1 416 36.8
Cfa017069 Carpinus fangiana HOM05D007193 ORTHO05D008972 2.0e-47 193.7 403 36.5
COL.COLO4_36102 Corchorus olitorius HOM05D007193 ORTHO05D008972 3.3e-47 193.0 407 37.1
Hma1.2p1_0174F.1_g077020 Hydrangea macrophylla HOM05D007193 ORTHO05D008972 4.4e-47 192.6 398 34.9
Prupe.6G289100 Prunus persica HOM05D007193 ORTHO05D008972 5.7e-47 192.2 419 36.3
CSS0034035 Camellia sinensis var. sinensis HOM05D007193 ORTHO05D008972 1.7e-46 190.7 396 34.6
Haze_21127 Corylus avellana HOM05D007193 ORTHO05D008972 2.8e-46 189.9 405 35.6
Rhsim04G0123100 Rhododendron simsii HOM05D007193 ORTHO05D008972 3.7e-46 189.5 406 34.5
RcHm_v2.0_Chr3g0461371 Rosa chinensis HOM05D007193 ORTHO05D008972 1.4e-45 187.6 413 35.4
CSS0011076 Camellia sinensis var. sinensis HOM05D007193 ORTHO05D008972 3.1e-45 186.4 408 33.6
Lj2A63T42 Lonicera japonica HOM05D007193 ORTHO05D008972 3.1e-45 186.4 404 34.9
FAN09G4509 Fragaria x ananassa HOM05D007193 ORTHO05D008972 1.2e-44 184.5 407 34.4
FAN02G2621 Fragaria x ananassa HOM05D007193 ORTHO05D008972 1.5e-44 184.1 407 34.4
Gorai.005G006400 Gossypium raimondii HOM05D007193 ORTHO05D008972 2.0e-44 183.7 424 33.0
CiPaw.09G217600 Carya illinoinensis HOM05D007193 ORTHO05D008972 3.4e-44 183.0 351 39.9
Glyma.09G278200 Glycine max HOM05D007193 ORTHO05D008972 3.4e-44 183.0 365 36.4
Manes.09G115100 Manihot esculenta HOM05D007193 ORTHO05D008972 4.5e-44 182.6 223 48.0
TWI53G1230 Tripterygium wilfordii HOM05D007193 ORTHO05D008972 4.5e-44 182.6 354 37.0
FvH4_6g10470 Fragaria vesca HOM05D007193 ORTHO05D008972 5.9e-44 182.2 407 34.4
FAN05G1003 Fragaria x ananassa HOM05D007193 ORTHO05D008972 5.9e-44 182.2 407 34.2
VMungo1383G2109 Vigna mungo HOM05D007193 ORTHO05D008972 1.0e-43 181.4 419 34.8
Medtr7g072460 Medicago truncatula HOM05D007193 ORTHO05D008972 1.7e-43 180.6 403 34.2
Glyma.18G210600 Glycine max HOM05D007193 ORTHO05D008972 5.0e-43 179.1 365 36.2
MD04G1170300 Malus domestica HOM05D007193 ORTHO05D008972 5.0e-43 179.1 416 34.4
FAN14G4175 Fragaria x ananassa HOM05D007193 ORTHO05D008972 6.5e-43 178.7 403 34.2
Gohir.A09G213630 Gossypium hirsutum HOM05D007193 ORTHO05D008972 6.5e-43 178.7 404 34.9
TAR633G0507 Trochodendron aralioides HOM05D007193 ORTHO05D008972 8.5e-43 178.3 408 33.8
Eucgr.A00654 Eucalyptus grandis HOM05D007193 ORTHO05D008972 1.4e-42 177.6 413 34.6
TPR.G30994 Trifolium pratense HOM05D007193 ORTHO05D008972 1.9e-42 177.2 399 33.6
Phvul.008G087300 Phaseolus vulgaris HOM05D007193 ORTHO05D008972 3.2e-42 176.4 362 36.5
Peaxi162Scf00732g00443 Petunia axillaris HOM05D007193 ORTHO05D008972 4.2e-42 176.0 413 33.4
Gorai.006G233700 Gossypium raimondii HOM05D007193 ORTHO05D008972 1.2e-41 174.5 431 34.3
Lalb_Chr01g0023631 Lupinus albus HOM05D007193 ORTHO05D008972 2.1e-41 173.7 410 34.1
Ciclev10011631m.g Citrus clementina HOM05D007193 ORTHO05D008972 5.2e-40 169.1 399 33.6
Psat3g122120 Pisum sativum HOM05D007193 ORTHO05D008972 1.1e-39 167.9 406 33.0
Nn2g11074 Nelumbo nucifera HOM05D007193 ORTHO05D008972 2.0e-39 167.2 409 33.7
Cc02_g36290 Coffea canephora HOM05D007193 ORTHO05D008972 4.4e-39 166.0 417 32.4
Sed0019502 Sechium edule HOM05D007193 ORTHO05D008972 7.4e-39 165.2 423 33.6
THA.LOC104806626 Tarenaya hassleriana HOM05D007193 ORTHO05D008972 7.4e-39 165.2 415 31.8
Atru.chr8.2367 Acer truncatum HOM05D007193 ORTHO05D008972 9.7e-39 164.9 408 32.1
MD12G1184300 Malus domestica HOM05D007193 ORTHO05D008972 1.3e-38 164.5 411 33.6
arahy.Tifrunner.gnm1.ann1.Y4LGN2 Arachis hypogaea HOM05D007193 ORTHO05D008972 3.7e-38 162.9 410 31.2
Nitab4.5_0000454g0040 Nicotiana tabacum HOM05D007193 ORTHO05D008972 3.7e-38 162.9 413 31.0
Nitab4.5_0012389g0010 Nicotiana tabacum HOM05D007193 ORTHO05D008972 1.1e-37 161.4 413 30.8
arahy.Tifrunner.gnm1.ann1.N3F1SH Arachis hypogaea HOM05D007193 ORTHO05D008972 1.4e-37 161.0 410 31.0
Oeu057644.3 Olea europaea HOM05D007193 ORTHO05D008972 3.1e-37 159.8 403 31.3
CANSAT35G0173 Cannabis sativa HOM05D007193 ORTHO05D008972 2.6e-36 156.8 379 33.5
DCAR_028906 Daucus carota HOM05D007193 ORTHO05D008972 3.5e-36 156.4 323 33.4
PGR031G3803 Punica granatum HOM05D007193 ORTHO05D008972 4.5e-36 156.0 409 33.0
CsaV3_3G033230 Cucumis sativus L. HOM05D007193 ORTHO05D008972 5.0e-35 152.5 402 32.8
CAN.G475.6 Capsicum annuum HOM05D007193 ORTHO05D008972 6.5e-35 152.1 414 30.7
AUR62006334 Chenopodium quinoa HOM05D007193 ORTHO05D008972 2.5e-34 150.2 402 31.3
MELO3C009116.2 Cucumis melo HOM05D007193 ORTHO05D008972 5.5e-34 149.1 402 31.8
vmacro08932 Vaccinium macrocarpon HOM05D007193 ORTHO05D008972 5.5e-34 149.1 392 31.9
Gohir.D09G213500 Gossypium hirsutum HOM05D007193 ORTHO05D008972 7.2e-34 148.7 407 33.7
Lj1g0001931 Lotus japonicus HOM05D007193 ORTHO05D008972 7.2e-34 148.7 410 31.7
CAN.G940.17 Capsicum annuum HOM05D007193 ORTHO05D008972 1.2e-33 147.9 411 29.9
Glyma.19G111900 Glycine max HOM05D007193 ORTHO05D008972 2.1e-33 147.1 227 41.4
ClCG10G022600 Citrullus lanatus HOM05D007193 ORTHO05D008972 2.7e-33 146.7 406 30.8
Hund03753 Selenicereus undatus HOM05D007193 ORTHO05D008972 4.7e-33 146.0 405 31.9
Gohir.A02G005200 Gossypium hirsutum HOM05D007193 ORTHO05D008972 6.1e-33 145.6 309 34.3
Sopen09g011740 Solanum pennellii HOM05D007193 ORTHO05D008972 6.1e-33 145.6 360 31.4
PGSC0003DMG400017034 Solanum tuberosum HOM05D007193 ORTHO05D008972 3.0e-32 143.3 411 29.2
EL10Ac7g17043 Beta vulgaris HOM05D007193 ORTHO05D008972 5.2e-32 142.5 411 30.2
AT3G51710 Arabidopsis thaliana HOM05D007193 ORTHO05D008972 6.7e-32 142.1 412 30.3
Sp5g10570 Schrenkiella parvula HOM05D007193 ORTHO05D008972 8.8e-32 141.7 409 30.6
Solyc09g018490.4 Solanum lycopersicum HOM05D007193 ORTHO05D008972 8.8e-32 141.7 360 30.8
Cpa.g.sc33.101 Carica papaya HOM05D007193 ORTHO05D008972 2.0e-31 140.6 379 32.5
Migut.J00070 Erythranthe guttata HOM05D007193 ORTHO05D008972 5.7e-31 139.0 420 31.2
Ah.08g209780 Amaranthus hybridus HOM05D007193 ORTHO05D008972 1.7e-30 137.5 406 31.0
CARHR161320 Cardamine hirsuta HOM05D007193 ORTHO05D008972 2.2e-30 137.1 411 30.2
MBI14_g13641_MAGBIO Magnolia biondii HOM05D007193 ORTHO05D008972 2.2e-30 137.1 354 29.4
AUR62026371 Chenopodium quinoa HOM05D007193 ORTHO05D008972 3.7e-30 136.3 371 31.3
AL5G32160 Arabidopsis lyrata HOM05D007193 ORTHO05D008972 4.8e-30 136.0 412 29.6
BcaC06g33003 Brassica carinata HOM05D007193 ORTHO05D008972 6.3e-30 135.6 412 29.6
Aqoxy4G02155 Aquilegia oxysepala HOM05D007193 ORTHO05D008972 1.1e-29 134.8 405 29.1
BraA03t13951Z Brassica rapa HOM05D007193 ORTHO05D008972 1.4e-29 134.4 409 28.6
BcaC06g33345 Brassica carinata HOM05D007193 ORTHO05D008972 2.0e-28 130.6 418 28.2
C07p46550 Brassica napus HOM05D007193 ORTHO05D008972 2.0e-28 130.6 418 28.2
A03p48460 Brassica napus HOM05D007193 ORTHO05D008972 2.7e-28 130.2 409 27.9
SGA_v2.0_scaffold85G26656 Striga asiatica HOM05D007193 ORTHO05D008972 4.5e-28 129.4 400 28.5
Carub.0005s1805 Capsella rubella HOM05D007193 ORTHO05D008972 5.9e-28 129.0 409 28.9
PSO017G7058 Papaver somniferum HOM05D007193 ORTHO05D008972 2.9e-27 126.7 413 30.3
THA.LOC104806964 Tarenaya hassleriana HOM05D007193 ORTHO05D008972 1.9e-26 124.0 299 31.4
Aa31sc223G10 Aethionema arabicum HOM05D007193 ORTHO05D008972 3.2e-26 123.2 411 27.3
Lsat_1_v5_gn_9_38080 Lactuca sativa HOM05D007193 ORTHO05D008972 1.2e-25 121.3 375 29.3
Gohir.D02G005700 Gossypium hirsutum HOM05D007193 ORTHO05D008972 2.7e-25 120.2 281 33.5
Actinidia32557 Actinidia chinensis HOM05D007193 ORTHO05D008972 4.7e-25 119.4 294 34.7
Thhalv10010348m.g Eutrema salsugineum HOM05D007193 ORTHO05D008972 6.8e-24 115.5 413 27.6
Ca_07743_v3 Cicer arietinum L. HOM05D007193 ORTHO05D008972 1.3e-22 111.3 284 31.0
HanXRQChr10g0286401 Helianthus annuus HOM05D007193 ORTHO05D008972 3.8e-19 99.8 397 25.4
Thecc.04G156300 Theobroma cacao HOM05D007193 ORTHO05D008972 1.7e-14 84.3 104 52.9
PSO170G5268 Papaver somniferum HOM05D007193 ORTHO05D008972 1.9e-10 70.9 185 31.4
Gohir.D02G005600 Gossypium hirsutum HOM05D007193 ORTHO05D008972 2.1e-09 67.4 74 44.6
Sc02g0000770 Simmondsia chinensis HOM05D007193 ORTHO05D008972 6.1e-09 65.9 127 36.2
Sc02g0000780 Simmondsia chinensis HOM05D007193 ORTHO05D008972 7.5e-07 58.9 66 47.0
GSVIVG01010815001 Vitis vinifera HOM05D007193 ORTHO05D008972 9.8e-07 58.5 124 39.5
Actinidia11181 Actinidia chinensis HOM05D000038 ORTHO05D000423 2.9e-06 57.0 173 30.6


User provided reference genes

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