Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 6.9e-99 364.0 187 100.0
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 4.7e-71 271.6 173 78.0
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 6.1e-71 271.2 181 74.6
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 6.1e-71 271.2 181 74.6
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 1.4e-70 270.0 176 77.8
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 2.3e-70 269.2 175 78.3
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 1.1e-69 266.9 182 76.4
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 1.5e-69 266.5 181 75.1
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 2.0e-69 266.2 181 75.1
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 4.4e-69 265.0 182 73.1
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 9.7e-69 263.8 182 74.2
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 1.3e-68 263.5 178 75.3
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 2.8e-68 262.3 181 74.0
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 4.8e-68 261.5 181 74.0
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 4.8e-68 261.5 181 73.5
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 1.1e-67 260.4 172 76.2
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 1.8e-67 259.6 181 72.4
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 3.1e-67 258.8 176 73.9
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 3.1e-67 258.8 182 70.9
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 3.1e-67 258.8 182 70.9
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 5.3e-67 258.1 170 76.5
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 7.0e-67 257.7 173 73.4
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 9.1e-67 257.3 179 71.5
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 9.1e-67 257.3 174 72.4
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 9.1e-67 257.3 174 73.6
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 1.2e-66 256.9 178 72.5
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.5e-66 256.5 182 70.9
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 3.5e-66 255.4 182 70.3
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 5.9e-66 254.6 178 70.8
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 5.9e-66 254.6 182 70.3
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 7.7e-66 254.2 178 70.8
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 1.0e-65 253.8 176 72.7
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 3.8e-65 251.9 177 70.6
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 8.5e-65 250.8 177 70.1
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 8.5e-65 250.8 179 70.9
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 1.1e-64 250.4 187 67.9
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 1.5e-64 250.0 177 70.1
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 1.5e-64 250.0 175 72.0
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 1.9e-64 249.6 177 70.1
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 2.1e-63 246.1 174 71.3
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 3.6e-63 245.4 179 69.8
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 4.7e-63 245.0 168 71.4
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 8.0e-63 244.2 184 66.8
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 1.0e-62 243.8 171 70.2
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 2.3e-62 242.7 173 71.7
THA.LOC104803694 Tarenaya hassleriana HOM05D002799 ORTHO05D008889 3.3e-61 238.8 171 69.6
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 5.7e-61 238.0 168 69.6
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 5.7e-61 238.0 160 73.8
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 9.7e-61 237.3 174 66.7
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 2.2e-60 236.1 172 68.0
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 8.2e-60 234.2 171 69.0
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 3.1e-59 232.3 171 67.8
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 3.1e-59 232.3 171 67.8
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 4.1e-59 231.9 172 68.0
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 4.1e-59 231.9 158 73.4
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 5.3e-59 231.5 178 64.6
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 7.0e-59 231.1 171 67.3
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 1.2e-58 230.3 173 66.5
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 1.6e-58 229.9 171 68.4
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 1.6e-58 229.9 175 65.1
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 2.6e-58 229.2 168 69.0
BcaB07g31750 Brassica carinata HOM05D002799 ORTHO05D008889 3.5e-58 228.8 171 67.8
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 4.5e-58 228.4 169 69.2
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 4.5e-58 228.4 172 68.0
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 5.9e-58 228.0 171 67.8
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 1.0e-57 227.3 170 68.2
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 2.9e-57 225.7 174 64.9
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 5.0e-57 224.9 170 66.5
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 5.0e-57 224.9 170 65.3
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 8.5e-57 224.2 165 67.3
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 8.5e-57 224.2 157 70.7
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 1.9e-56 223.0 166 68.7
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 1.9e-56 223.0 155 72.9
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 4.2e-56 221.9 170 63.5
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 7.2e-56 221.1 157 68.8
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 7.2e-56 221.1 154 72.1
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 1.2e-55 220.3 177 63.3
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 1.2e-55 220.3 166 69.3
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 2.1e-55 219.5 170 62.9
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 4.7e-55 218.4 166 68.1
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 6.1e-55 218.0 153 67.3
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 8.0e-55 217.6 172 64.0
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 1.8e-54 216.5 171 62.6
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 2.0e-53 213.0 178 59.6
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 1.7e-52 209.9 172 57.6
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 1.1e-51 207.2 136 75.0
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 5.9e-50 201.4 188 58.5
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 1.7e-49 199.9 187 57.8
COL.COLO4_19775 Corchorus olitorius HOM05D002799 ORTHO05D008889 5.7e-45 184.9 132 68.2
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 7.5e-45 184.5 137 65.7
Ca_14681_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 1.3e-44 183.7 131 68.7
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 1.7e-44 183.3 136 66.2
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 1.7e-44 183.3 134 70.1
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 6.3e-44 181.4 189 51.9
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 1.2e-42 177.2 180 49.4
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 2.7e-42 176.0 129 69.8
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 2.7e-42 176.0 122 69.7
Psat4g127040 Pisum sativum HOM05D002799 ORTHO05D008889 5.9e-42 174.9 128 66.4
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 1.7e-41 173.3 176 52.8
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 5.2e-38 161.8 196 46.4
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 8.3e-36 154.5 98 73.5
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 2.0e-34 149.8 103 72.8
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 1.1e-32 144.1 172 45.3
HPP92_002455 Vanilla planifolia HOM05D002799 ORTHO05D008889 2.2e-28 129.8 171 45.0
PSO675G4133 Papaver somniferum HOM05D002799 ORTHO05D008889 4.9e-28 128.6 149 49.7
SHI03438 Sapria himalayana HOM05D002799 ORTHO05D008889 1.1e-27 127.5 128 53.9
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 1.4e-22 110.5 170 37.6
BcaB03g16409 Brassica carinata HOM05D002799 ORTHO05D008889 1.5e-21 107.1 110 55.5
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 3.7e-20 102.4 153 39.2
C07p06790 Brassica napus HOM05D002799 ORTHO05D008889 2.1e-18 96.7 132 44.7
PRCOL_00003203 Prasinoderma coloniale HOM05D002799 ORTHO05D008889 2.7e-18 96.3 173 39.3
Cfa026682 Carpinus fangiana HOM05D002799 ORTHO05D008889 1.9e-16 90.1 149 36.9
Ca_28676_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 3.4e-13 79.3 135 34.1
HanXRQChr10g0305151 Helianthus annuus HOM05D002799 ORTHO05D008889 6.4e-12 75.1 48 68.8
Zm00001eb177740 Zea mays HOM05D002799 ORTHO05D008889 4.3e-08 62.4 57 50.9


User provided reference genes

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