Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G161700 Manihot esculenta HOM05D002505 ORTHO05D006559 6.7e-212 740.7 465 100.0
Potri.015G137000 Populus trichocarpa HOM05D002505 ORTHO05D006559 2.6e-107 393.3 489 55.2
TWI59G0446 Tripterygium wilfordii HOM05D002505 ORTHO05D006559 1.8e-103 380.6 416 57.0
Dinv37391 Davidia involucrata HOM05D002505 ORTHO05D007115 1.9e-97 360.5 440 53.0
TAR626G1844 Trochodendron aralioides HOM05D002505 ORTHO05D006559 1.9e-97 360.5 487 51.7
Nn4g25029 Nelumbo nucifera HOM05D002505 ORTHO05D006559 5.2e-95 352.4 490 50.2
ClCG07G010710 Citrullus lanatus HOM05D002505 ORTHO05D006559 7.5e-94 348.6 491 49.1
CSS0039073 Camellia sinensis var. sinensis HOM05D002505 ORTHO05D006559 1.4e-92 344.4 420 53.8
MELO3C016182.2 Cucumis melo HOM05D002505 ORTHO05D006559 3.1e-92 343.2 434 53.0
Gorai.013G241700 Gossypium raimondii HOM05D002505 ORTHO05D006559 5.3e-92 342.4 492 52.0
Duzib168G0650 Durio zibethinus HOM05D002505 ORTHO05D006559 1.2e-91 341.3 486 53.5
Gohir.D13G211600 Gossypium hirsutum HOM05D002505 ORTHO05D006559 2.0e-91 340.5 496 52.2
Gohir.A13G207000 Gossypium hirsutum HOM05D002505 ORTHO05D006559 7.7e-91 338.6 503 52.1
CsaV3_4G007590 Cucumis sativus L. HOM05D002505 ORTHO05D006559 1.0e-90 338.2 436 53.4
Atru.chr1.1039 Acer truncatum HOM05D002505 ORTHO05D006559 6.5e-90 335.5 482 54.6
Sabra15G0148600 Salix brachista HOM05D002505 ORTHO05D006559 4.2e-89 332.8 495 47.3
Cpa.g.sc77.87 Carica papaya HOM05D002505 ORTHO05D006559 7.2e-89 332.0 430 54.0
Atru.chr3.1220 Acer truncatum HOM05D002505 ORTHO05D006559 3.6e-88 329.7 480 52.1
Sc18g0006950 Simmondsia chinensis HOM05D002505 ORTHO05D006559 1.8e-87 327.4 485 51.1
Thecc.09G195000 Theobroma cacao HOM05D002505 ORTHO05D006559 3.0e-87 326.6 202 78.2
CiPaw.15G113000 Carya illinoinensis HOM05D002505 ORTHO05D006559 4.0e-87 326.2 396 52.8
Sed0021026 Sechium edule HOM05D002505 ORTHO05D006559 8.8e-87 325.1 478 49.6
CSS0016681 Camellia sinensis var. sinensis HOM05D002505 ORTHO05D006559 9.8e-86 321.6 419 51.3
Prupe.4G127000 Prunus persica HOM05D002505 ORTHO05D006559 4.8e-85 319.3 493 50.5
arahy.Tifrunner.gnm1.ann1.GJQ7VP Arachis hypogaea HOM05D002505 ORTHO05D006559 8.3e-85 318.5 502 48.2
Eucgr.D02598 Eucalyptus grandis HOM05D002505 ORTHO05D006559 8.3e-85 318.5 387 54.5
MD05G1239100 Malus domestica HOM05D002505 ORTHO05D006559 1.1e-84 318.2 490 51.2
SHI32899 Sapria himalayana HOM05D002505 ORTHO05D006559 1.4e-84 317.8 468 48.1
arahy.Tifrunner.gnm1.ann1.C6HHUS Arachis hypogaea HOM05D002505 ORTHO05D006559 3.1e-84 316.6 501 47.7
Rhsim09G0088500 Rhododendron simsii HOM05D002505 ORTHO05D006559 4.1e-84 316.2 498 48.0
Solyc01g098030.4 Solanum lycopersicum HOM05D002505 ORTHO05D006559 2.7e-83 313.5 397 56.2
Actinidia12750 Actinidia chinensis HOM05D002505 ORTHO05D006559 4.5e-83 312.8 402 51.0
GSVIVG01031552001 Vitis vinifera HOM05D002505 ORTHO05D006559 4.5e-83 312.8 201 74.1
vmacro00789 Vaccinium macrocarpon HOM05D002505 ORTHO05D006559 5.9e-83 312.4 520 45.0
MSTRG.14571 Avicennia marina HOM05D002505 ORTHO05D006559 7.7e-83 312.0 403 51.1
Sopen01g041610 Solanum pennellii HOM05D002505 ORTHO05D006559 7.7e-83 312.0 403 55.3
MD10G1217100 Malus domestica HOM05D002505 ORTHO05D006559 1.7e-82 310.8 529 47.1
FAN16G0440 Fragaria x ananassa HOM05D002505 ORTHO05D006559 2.9e-82 310.1 201 73.6
FAN25G1470 Fragaria x ananassa HOM05D002505 ORTHO05D006559 2.9e-82 310.1 201 73.6
Phvul.006G073200 Phaseolus vulgaris HOM05D002505 ORTHO05D006559 3.8e-82 309.7 516 49.0
PGSC0003DMG400022499 Solanum tuberosum HOM05D002505 ORTHO05D006559 6.5e-82 308.9 488 52.9
FvH4_3g14000 Fragaria vesca HOM05D002505 ORTHO05D006559 8.5e-82 308.5 201 73.1
FAN11G2806 Fragaria x ananassa HOM05D002505 ORTHO05D006559 8.5e-82 308.5 201 73.1
arahy.Tifrunner.gnm1.ann1.91B0ED Arachis hypogaea HOM05D002505 ORTHO05D006559 1.1e-81 308.1 500 45.8
Cc05_g16590 Coffea canephora HOM05D002505 ORTHO05D006559 1.1e-81 308.1 326 62.0
CAN.G134.186 Capsicum annuum HOM05D002505 ORTHO05D006559 5.5e-81 305.8 318 63.8
Oeu019749.1 Olea europaea HOM05D002505 ORTHO05D006559 9.4e-81 305.1 318 57.5
Glyma.09G030100 Glycine max HOM05D002505 ORTHO05D006559 2.1e-80 303.9 477 47.6
Nitab4.5_0002840g0110 Nicotiana tabacum HOM05D002505 ORTHO05D006559 2.1e-80 303.9 327 61.2
Lj6g0017559 Lotus japonicus HOM05D002505 ORTHO05D006559 3.6e-80 303.1 520 44.0
Peaxi162Scf00225g00129 Petunia axillaris HOM05D002505 ORTHO05D006559 4.7e-80 302.8 329 60.5
RcHm_v2.0_Chr5g0023231 Rosa chinensis HOM05D002505 ORTHO05D006559 4.7e-80 302.8 397 56.7
Ca_18602_v3 Cicer arietinum L. HOM05D002505 ORTHO05D006559 2.3e-79 300.4 494 49.8
FAN21G2970 Fragaria x ananassa HOM05D002505 ORTHO05D006559 2.3e-79 300.4 501 49.9
PGR102G1955 Punica granatum HOM05D002505 ORTHO05D006559 3.0e-79 300.1 434 44.7
Nitab4.5_0002361g0170 Nicotiana tabacum HOM05D002505 ORTHO05D006559 8.8e-79 298.5 324 64.8
Phvul.006G122700 Phaseolus vulgaris HOM05D002505 ORTHO05D006559 2.2e-77 293.9 201 73.1
SGA_v2.0_scaffold49G18207 Striga asiatica HOM05D002505 ORTHO05D006559 2.4e-76 290.4 400 48.5
CANSAT21G0880 Cannabis sativa HOM05D002505 ORTHO05D006559 5.9e-75 285.8 490 48.8
VMungo1309G1878 Vigna mungo HOM05D002505 ORTHO05D006559 1.7e-74 284.3 201 70.6
EL10Ac5g10510 Beta vulgaris HOM05D002505 ORTHO05D006559 5.0e-74 282.7 454 43.6
Migut.H01653 Erythranthe guttata HOM05D002505 ORTHO05D006559 6.6e-74 282.3 192 69.3
VMungo0540G1128 Vigna mungo HOM05D002505 ORTHO05D006559 1.9e-73 280.8 579 42.5
Rhsim06G0244600 Rhododendron simsii HOM05D002505 ORTHO05D006559 2.5e-73 280.4 467 49.0
DCAR_009664 Daucus carota HOM05D002505 ORTHO05D006559 7.3e-73 278.9 187 70.1
Lalb_Chr20g0120281 Lupinus albus HOM05D002505 ORTHO05D006559 2.1e-72 277.3 485 45.6
AUR62011379 Chenopodium quinoa HOM05D002505 ORTHO05D006559 8.0e-72 275.4 419 47.0
Ciclev10019766m.g Citrus clementina HOM05D002505 ORTHO05D006559 8.0e-72 275.4 372 59.9
BraA06t23318Z Brassica rapa HOM05D001023 ORTHO05D006559 3.0e-71 273.5 513 46.4
ECA246G4077 Erigeron canadensis HOM05D002505 ORTHO05D006559 5.2e-71 272.7 510 42.4
Hund09330 Selenicereus undatus HOM05D002505 ORTHO05D006559 5.2e-71 272.7 449 47.4
HanXRQChr05g0159341 Helianthus annuus HOM05D002505 ORTHO05D006559 2.0e-70 270.8 188 68.6
HPP92_002279 Vanilla planifolia HOM05D002505 ORTHO05D006559 3.4e-70 270.0 305 53.4
AUR62002958 Chenopodium quinoa HOM05D002505 ORTHO05D006559 1.7e-69 267.7 403 42.9
Medtr8g078230 Medicago truncatula HOM05D002505 ORTHO05D006559 3.7e-69 266.5 191 68.1
THA.LOC104822601 Tarenaya hassleriana HOM05D002505 ORTHO05D006559 6.4e-69 265.8 405 45.7
Ah.09g227860 Amaranthus hybridus HOM05D002505 ORTHO05D006559 1.1e-68 265.0 411 41.8
CDE05G0972 Ceratophyllum demersum HOM05D002505 ORTHO05D006559 1.1e-68 265.0 415 43.1
ATR0057G033 Amborella trichopoda HOM05D002505 ORTHO05D006559 9.2e-68 261.9 392 44.4
AUR62016680 Chenopodium quinoa HOM05D002505 ORTHO05D006559 1.2e-67 261.5 391 50.4
AUR62007763 Chenopodium quinoa HOM05D002505 ORTHO05D006559 2.0e-67 260.8 403 42.7
Carub.0001s4291 Capsella rubella HOM05D002505 ORTHO05D006559 3.5e-67 260.0 534 43.8
Lj1C206G15 Lonicera japonica HOM05D002505 ORTHO05D006559 4.6e-67 259.6 165 75.8
Sp1g40180 Schrenkiella parvula HOM05D002505 ORTHO05D006559 5.9e-67 259.2 202 63.4
AL1G62310 Arabidopsis lyrata HOM05D002505 ORTHO05D006559 7.8e-67 258.8 455 43.7
AT1G53645 Arabidopsis thaliana HOM05D002505 ORTHO05D006559 1.3e-66 258.1 457 43.5
BcaB02g10898 Brassica carinata HOM05D002505 ORTHO05D006559 3.0e-66 256.9 395 47.3
Aa31LG10G1650 Aethionema arabicum HOM05D002505 ORTHO05D006559 3.9e-66 256.5 202 62.9
Thhalv10011382m.g Eutrema salsugineum HOM05D002505 ORTHO05D006559 6.6e-66 255.8 195 63.6
PSO017G2893 Papaver somniferum HOM05D002505 ORTHO05D006559 6.6e-66 255.8 454 45.2
A06p00890 Brassica napus HOM05D001023 ORTHO05D006559 1.1e-65 255.0 553 42.9
PSO170G3666 Papaver somniferum HOM05D002505 ORTHO05D006559 1.1e-65 255.0 456 45.6
Lsat_1_v5_gn_5_3041 Lactuca sativa HOM05D002505 ORTHO05D006559 1.5e-65 254.6 492 47.0
CARHR043910 Cardamine hirsuta HOM05D002505 ORTHO05D006559 3.3e-65 253.4 475 42.3
CDE02G1608 Ceratophyllum demersum HOM05D002505 ORTHO05D006559 4.3e-65 253.1 316 48.1
C06p09440 Brassica napus HOM05D001023 ORTHO05D006559 5.6e-65 252.7 410 48.5
BcaB07g33312 Brassica carinata HOM05D002505 ORTHO05D006559 7.3e-65 252.3 195 62.6
BcaC08g43545 Brassica carinata HOM05D002505 ORTHO05D006559 7.3e-65 252.3 399 47.1
BolC6t36013H Brassica oleracea HOM05D001023 ORTHO05D006559 1.2e-64 251.5 399 47.1
Aqoxy1G00117 Aquilegia oxysepala HOM05D002505 ORTHO05D006559 2.1e-64 250.8 445 42.9
Os06g0664400 Oryza sativa ssp. japonica HOM05D002505 ORTHO05D006559 2.6e-62 243.8 193 58.5
Psat4g091000 Pisum sativum HOM05D002505 ORTHO05D006559 3.7e-61 240.0 404 45.5
Zm00001eb060430 Zea mays HOM05D002505 ORTHO05D006559 8.6e-58 228.8 426 40.4
unitig_21.g20249 Utricularia gibba HOM05D002505 ORTHO05D006559 2.5e-57 227.3 192 56.2
Dinv17234 Davidia involucrata HOM05D002505 ORTHO05D006559 1.1e-55 221.9 351 45.9
BolC6t36693H Brassica oleracea HOM05D002505 ORTHO05D006559 2.6e-54 217.2 165 64.2
C06p15180 Brassica napus HOM05D002505 ORTHO05D006559 9.5e-49 198.7 140 68.6
Haze_18498 Corylus avellana HOM05D002505 ORTHO05D006559 2.8e-48 197.2 304 55.3
A05p18000 Brassica napus HOM05D002505 ORTHO05D006559 1.5e-46 191.4 177 55.4
BraA05t20694Z Brassica rapa HOM05D002505 ORTHO05D006559 1.5e-46 191.4 177 55.4
QL04p094522 Quercus lobata HOM05D002505 ORTHO05D000632 4.4e-46 189.9 580 35.7
BcaC08g44112 Brassica carinata HOM05D002505 ORTHO05D006559 6.4e-37 159.5 139 58.3
Thhalv10012156m.g Eutrema salsugineum HOM05D002505 ORTHO05D006559 2.4e-36 157.5 107 67.3
Glyma.15G135900 Glycine max HOM05D002505 ORTHO05D006559 3.2e-36 157.1 118 66.1
Dinv29488 Davidia involucrata HOM05D002505 ORTHO05D006559 3.6e-32 143.7 90 76.7
CSS0015020 Camellia sinensis var. sinensis HOM05D002505 ORTHO05D006559 1.6e-27 128.3 285 42.5
Ah.07g202770 Amaranthus hybridus HOM05D002505 ORTHO05D006559 1.3e-26 125.2 87 67.8
Ah.13g066500 Amaranthus hybridus HOM05D002505 ORTHO05D006559 3.9e-26 123.6 315 33.3
Mapoly0043s0004 Marchantia polymorpha HOM05D002505 ORTHO05D006559 2.8e-24 117.5 155 35.5
Pp3c12_26140 Physcomitrium patens HOM05D002505 ORTHO05D006559 2.4e-23 114.4 143 39.2
QL04p094482 Quercus lobata HOM05D000280 ORTHO05D006559 1.6e-19 101.7 63 77.8
Actinidia26206 Actinidia chinensis HOM05D002505 ORTHO05D006559 2.1e-19 101.3 64 73.4
AagrBONN_evm.TU.Sc2ySwM_228.276 Anthoceros agrestis HOM05D002505 ORTHO05D006559 2.1e-19 101.3 143 33.6
RcHm_v2.0_Chr5g0023281 Rosa chinensis HOM05D002505 ORTHO05D006559 7.4e-17 92.8 62 74.2
Haze_18499 Corylus avellana HOM05D002505 ORTHO05D006559 6.2e-16 89.7 62 67.7
SEGI_13390 Sequoiadendron giganteum HOM05D002505 ORTHO05D006559 1.7e-13 81.6 81 49.4
Ah.13g066490 Amaranthus hybridus HOM05D002505 ORTHO05D006559 2.9e-13 80.9 63 65.1
Actinidia26205 Actinidia chinensis HOM05D002505 ORTHO05D006559 3.7e-08 63.9 38 76.3
COL.COLO4_21461 Corchorus olitorius HOM05D002505 ORTHO05D006559 2.6e-06 57.8 280 35.7
QL04p094472 Quercus lobata HOM05D002505 ORTHO05D006559 3.4e-06 57.4 31 77.4
CBR_g41404 Chara braunii HOM05D002505 ORTHO05D006559 1.0e-05 55.8 68 35.3


User provided reference genes

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