Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 4.5e-155 551.2 279 100.0
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 6.7e-98 361.3 286 64.7
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 2.1e-91 339.7 299 60.9
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 9.3e-84 314.3 300 58.3
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.2e-78 297.4 261 60.5
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 2.0e-78 296.6 260 60.4
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 4.5e-78 295.4 302 53.6
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.3e-77 293.9 236 64.4
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.7e-77 293.5 194 72.7
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 1.1e-76 290.8 241 63.9
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 6.1e-75 285.0 252 59.1
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 6.7e-74 281.6 198 71.2
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 6.7e-74 281.6 198 70.2
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 8.8e-74 281.2 245 61.6
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 1.1e-73 280.8 222 68.0
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 1.5e-73 280.4 203 69.0
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 2.0e-73 280.0 222 68.0
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 7.4e-73 278.1 235 62.1
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 9.7e-73 277.7 195 71.8
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 1.7e-72 276.9 276 54.3
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 2.8e-72 276.2 228 64.5
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 3.7e-72 275.8 260 56.2
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 6.3e-72 275.0 238 61.3
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.1e-71 274.2 205 65.9
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 1.8e-71 273.5 203 66.0
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 1.2e-70 270.8 194 70.6
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 2.0e-70 270.0 240 59.6
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 3.4e-70 269.2 250 56.8
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 4.5e-70 268.9 193 67.4
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.5e-70 268.9 255 56.5
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 5.9e-70 268.5 247 57.5
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.0e-69 267.7 230 62.6
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 1.0e-69 267.7 264 55.3
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 1.7e-69 266.9 203 67.0
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 3.8e-69 265.8 205 63.9
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 3.8e-69 265.8 194 63.9
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 6.5e-69 265.0 212 65.1
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 8.5e-69 264.6 212 64.2
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 8.5e-69 264.6 200 68.0
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 1.9e-68 263.5 240 56.2
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 1.9e-68 263.5 239 56.9
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 2.5e-68 263.1 234 61.1
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 3.2e-68 262.7 241 58.9
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.2e-68 262.7 230 61.3
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 4.2e-68 262.3 222 62.6
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 5.5e-68 261.9 225 59.6
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 7.2e-68 261.5 230 61.3
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 9.4e-68 261.2 241 58.9
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 9.4e-68 261.2 236 58.5
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 9.4e-68 261.2 196 64.8
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 9.4e-68 261.2 200 63.5
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 9.4e-68 261.2 300 49.0
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 4.7e-67 258.8 230 60.9
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 6.1e-67 258.5 230 60.4
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 6.1e-67 258.5 230 60.4
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 1.4e-66 257.3 247 56.7
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 2.3e-66 256.5 239 54.8
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 3.9e-66 255.8 233 57.5
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 3.9e-66 255.8 272 50.0
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 2.0e-65 253.4 272 53.3
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 2.6e-65 253.1 227 58.6
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 3.3e-65 252.7 227 58.6
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 7.4e-65 251.5 226 58.4
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 9.7e-65 251.1 227 57.7
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 1.3e-64 250.8 190 65.3
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 1.3e-64 250.8 226 59.7
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 1.7e-64 250.4 243 56.0
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 2.2e-64 250.0 273 50.2
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 2.8e-64 249.6 243 56.0
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 3.7e-64 249.2 242 55.8
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 4.8e-64 248.8 240 55.4
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 4.8e-64 248.8 258 51.9
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 8.2e-64 248.1 267 52.4
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 1.1e-63 247.7 226 57.5
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 1.1e-63 247.7 226 57.5
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 1.1e-63 247.7 257 51.8
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 9.1e-63 244.6 243 54.7
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 3.5e-62 242.7 195 61.5
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 3.5e-62 242.7 196 62.8
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 1.5e-60 237.3 200 59.0
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.9e-60 236.9 203 58.1
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 1.6e-59 233.8 157 70.7
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 2.1e-59 233.4 195 58.5
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 2.7e-59 233.0 214 59.8
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 8.0e-59 231.5 282 46.8
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 3.0e-58 229.6 275 45.8
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 5.2e-58 228.8 198 59.1
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 5.2e-58 228.8 192 57.8
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 1.5e-57 227.3 276 46.0
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 4.4e-57 225.7 275 46.5
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.8e-56 223.0 234 54.3
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 1.7e-53 213.8 223 53.4
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 4.2e-52 209.1 210 55.7
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 5.5e-52 208.8 247 47.0
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 3.0e-50 203.0 257 46.3
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 4.0e-50 202.6 254 44.9
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 7.5e-49 198.4 252 42.1
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 1.3e-48 197.6 192 51.6
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 9.1e-47 191.4 147 65.3
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 1.2e-46 191.0 149 64.4
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 1.8e-42 177.2 217 50.2
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 7.5e-41 171.8 200 45.0
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 8.3e-40 168.3 108 74.1
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 2.9e-37 159.8 130 63.8
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 1.9e-36 157.1 208 44.2
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 1.6e-35 154.1 161 54.7
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 1.4e-34 151.0 150 54.7
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 8.9e-34 148.3 130 59.2
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.0e-33 147.1 116 62.1
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 8.3e-32 141.7 130 55.4
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 1.6e-30 137.5 206 40.3
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 5.0e-29 132.5 142 51.4
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 3.6e-27 126.3 170 42.9
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 4.4e-25 119.4 111 54.1
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 5.8e-25 119.0 252 31.7
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.4e-23 114.4 125 51.2
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 7.3e-20 102.1 96 55.2
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 4.7e-19 99.4 108 45.4
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 1.1e-18 98.2 92 54.3
Cre06.g269100 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 2.6e-17 93.6 209 31.6
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 2.6e-17 93.6 148 40.5
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.8e-10 70.9 46 69.6
SEGI_09763 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.8e-08 63.2 64 51.6
MCO03G108 Micromonas commoda HOM05D006270 ORTHO05D007755 4.9e-08 62.8 181 32.0
SEGI_10524 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.4e-07 61.2 66 47.0
SEGI_16930 Sequoiadendron giganteum HOM05D005733 ORTHO05D007442 6.0e-06 55.8 85 31.8


User provided reference genes

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