Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G117600 Manihot esculenta HOM05D006406 ORTHO05D007883 7.5e-197 690.3 336 100.0
Duzib177G0190 Durio zibethinus HOM05D006406 ORTHO05D007883 2.6e-141 505.8 336 72.6
Thecc.05G312900 Theobroma cacao HOM05D006406 ORTHO05D007883 5.0e-140 501.5 337 73.3
Sabra13G0020100 Salix brachista HOM05D006406 ORTHO05D007883 5.5e-139 498.0 347 72.3
Sabra13G0015900 Salix brachista HOM05D006406 ORTHO05D007883 1.2e-138 496.9 347 72.3
Potri.013G017100 Populus trichocarpa HOM05D006406 ORTHO05D007883 7.9e-138 494.2 349 71.3
Cfa006628 Carpinus fangiana HOM05D006406 ORTHO05D007883 1.0e-137 493.8 339 72.6
Haze_04140 Corylus avellana HOM05D006406 ORTHO05D007883 1.0e-137 493.8 339 72.3
Cpa.g.sc48.95 Carica papaya HOM05D006406 ORTHO05D007883 2.3e-137 492.7 344 69.5
COL.COLO4_10518 Corchorus olitorius HOM05D006406 ORTHO05D007883 8.8e-137 490.7 337 72.4
QL03p020986 Quercus lobata HOM05D006406 ORTHO05D007883 1.1e-134 483.8 338 71.6
Gohir.A13G109200 Gossypium hirsutum HOM05D006406 ORTHO05D007883 5.3e-134 481.5 336 70.2
Gorai.013G125700 Gossypium raimondii HOM05D006406 ORTHO05D007883 2.6e-133 479.2 336 69.9
Ciclev10001711m.g Citrus clementina HOM05D006406 ORTHO05D007883 7.7e-133 477.6 343 69.1
QL03p021882 Quercus lobata HOM05D006406 ORTHO05D007883 2.2e-132 476.1 338 70.4
CiPaw.08G161900 Carya illinoinensis HOM05D006406 ORTHO05D007883 8.5e-132 474.2 342 68.4
Atru.chr2.29 Acer truncatum HOM05D006406 ORTHO05D007883 5.5e-131 471.5 335 69.3
TAR633G0157 Trochodendron aralioides HOM05D006406 ORTHO05D007883 2.8e-127 459.1 351 65.2
Gohir.D13G112000 Gossypium hirsutum HOM05D006406 ORTHO05D007883 3.7e-127 458.8 311 70.4
TWI12G0288 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 3.7e-127 458.8 344 66.9
PGR083G2713 Punica granatum HOM05D006406 ORTHO05D007883 4.8e-127 458.4 297 73.7
RcHm_v2.0_Chr3g0455711 Rosa chinensis HOM05D006406 ORTHO05D007883 1.4e-126 456.8 337 66.5
Glyma.03G235700 Glycine max HOM05D006406 ORTHO05D007883 1.2e-125 453.8 341 66.6
MD04G1200800 Malus domestica HOM05D006406 ORTHO05D007883 1.6e-125 453.4 340 67.4
Carub.0006s2486 Capsella rubella HOM05D006406 ORTHO05D007883 2.0e-125 453.0 338 64.5
Hma1.2p1_1212F.1_g267260 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 2.0e-125 453.0 334 65.9
GSVIVG01031144001 Vitis vinifera HOM05D006406 ORTHO05D007883 3.5e-125 452.2 348 67.0
vmacro04816 Vaccinium macrocarpon HOM05D006406 ORTHO05D007883 2.9e-124 449.1 357 64.4
CsaV3_1G038840 Cucumis sativus L. HOM05D006406 ORTHO05D007883 3.8e-124 448.7 337 63.8
Rhsim07G0188300 Rhododendron simsii HOM05D006406 ORTHO05D007883 3.8e-124 448.7 347 64.3
Medtr7g112650 Medicago truncatula HOM05D006406 ORTHO05D007883 5.0e-124 448.4 326 66.0
Sc16g0008820 Simmondsia chinensis HOM05D006406 ORTHO05D007883 5.0e-124 448.4 341 63.9
Lalb_Chr18g0045761 Lupinus albus HOM05D006406 ORTHO05D007883 6.5e-124 448.0 337 65.9
Oeu043348.1 Olea europaea HOM05D006406 ORTHO05D007883 2.5e-123 446.0 336 66.4
TPR.G33225 Trifolium pratense HOM05D006406 ORTHO05D007883 3.2e-123 445.7 334 65.9
Actinidia35561 Actinidia chinensis HOM05D006406 ORTHO05D007883 5.5e-123 444.9 349 63.9
VMungo0540G0116 Vigna mungo HOM05D006406 ORTHO05D007883 9.4e-123 444.1 342 65.2
arahy.Tifrunner.gnm1.ann1.Q6XDLT Arachis hypogaea HOM05D006406 ORTHO05D007883 1.6e-122 443.4 336 64.3
Peaxi162Scf00037g01125 Petunia axillaris HOM05D006406 ORTHO05D007883 1.6e-122 443.4 337 64.4
Nitab4.5_0003658g0090 Nicotiana tabacum HOM05D006406 ORTHO05D007883 2.7e-122 442.6 314 65.9
THA.LOC104818716 Tarenaya hassleriana HOM05D006406 ORTHO05D007883 2.7e-122 442.6 341 65.1
CAN.G1459.10 Capsicum annuum HOM05D006406 ORTHO05D007883 3.6e-122 442.2 309 67.0
arahy.Tifrunner.gnm1.ann1.PP7FUY Arachis hypogaea HOM05D006406 ORTHO05D007883 4.7e-122 441.8 336 64.0
ClCG03G017120 Citrullus lanatus HOM05D006406 ORTHO05D007883 4.7e-122 441.8 336 63.1
Lj1g0022852 Lotus japonicus HOM05D006406 ORTHO05D007883 1.4e-121 440.3 341 63.6
Aqoxy5G00730 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.8e-121 439.9 347 63.7
Eucgr.B01914 Eucalyptus grandis HOM05D006406 ORTHO05D007883 3.0e-121 439.1 365 61.9
Hund07096 Selenicereus undatus HOM05D006406 ORTHO05D007883 3.0e-121 439.1 337 64.7
TWI36G0652 Tripterygium wilfordii HOM05D006406 ORTHO05D007883 3.0e-121 439.1 344 62.5
Nn4g25830 Nelumbo nucifera HOM05D006406 ORTHO05D007883 2.0e-120 436.4 358 62.8
AT5G27710 Arabidopsis thaliana HOM05D006406 ORTHO05D007883 3.3e-120 435.6 341 62.2
Phvul.006G089700 Phaseolus vulgaris HOM05D006406 ORTHO05D007883 7.5e-120 434.5 333 65.2
Psat0s27g0120 Pisum sativum HOM05D006406 ORTHO05D007883 7.5e-120 434.5 334 62.9
Lj9C146T2 Lonicera japonica HOM05D006406 ORTHO05D007883 1.7e-119 433.3 306 66.7
AL6G39250 Arabidopsis lyrata HOM05D006406 ORTHO05D007883 2.8e-119 432.6 341 61.3
Prupe.6G320900 Prunus persica HOM05D006406 ORTHO05D007883 2.8e-119 432.6 314 69.7
Ca_05800_v3 Cicer arietinum L. HOM05D006406 ORTHO05D007883 6.3e-119 431.4 344 62.8
Thhalv10005730m.g Eutrema salsugineum HOM05D006406 ORTHO05D007883 3.1e-118 429.1 341 60.7
FAN14G3705 Fragaria x ananassa HOM05D006406 ORTHO05D007883 7.0e-118 427.9 309 67.6
Hund07097 Selenicereus undatus HOM05D006406 ORTHO05D007883 1.2e-117 427.2 294 68.0
Nitab4.5_0003844g0020 Nicotiana tabacum HOM05D006406 ORTHO05D007883 1.6e-117 426.8 302 66.6
Sp2g20880 Schrenkiella parvula HOM05D006406 ORTHO05D007883 1.6e-117 426.8 338 60.9
Aa31LG11G9460 Aethionema arabicum HOM05D006406 ORTHO05D007883 2.0e-117 426.4 341 60.4
Sopen01g043220 Solanum pennellii HOM05D006406 ORTHO05D007883 2.0e-117 426.4 341 60.4
Solyc01g099700.3 Solanum lycopersicum HOM05D006406 ORTHO05D007883 3.5e-117 425.6 341 60.1
SalBow7G2778 Salvia bowleyana HOM05D006406 ORTHO05D007883 5.9e-117 424.9 332 63.0
PGSC0003DMG400007542 Solanum tuberosum HOM05D006406 ORTHO05D007883 1.3e-116 423.7 301 65.8
Sed0006495 Sechium edule HOM05D006406 ORTHO05D007883 1.7e-116 423.3 341 61.3
CANSAT54G1062 Cannabis sativa HOM05D006406 ORTHO05D007883 2.9e-116 422.5 340 62.4
EL10Ac4g09916 Beta vulgaris HOM05D006406 ORTHO05D007883 8.5e-116 421.0 294 67.7
SGA_v2.0_scaffold172G38986 Striga asiatica HOM05D006406 ORTHO05D007883 9.4e-115 417.5 344 62.2
CSS0003718 Camellia sinensis var. sinensis HOM05D006406 ORTHO05D007883 8.0e-114 414.5 345 61.7
MBI18_g46420_MAGBIO Magnolia biondii HOM05D006406 ORTHO05D007883 3.0e-113 412.5 341 59.8
A09p05410 Brassica napus HOM05D006406 ORTHO05D007883 7.5e-112 407.9 341 60.1
BcaB04g19684 Brassica carinata HOM05D006406 ORTHO05D007883 4.8e-111 405.2 345 58.8
BraA09t36179Z Brassica rapa HOM05D006406 ORTHO05D007883 4.8e-111 405.2 341 59.5
unitig_52.g17112 Utricularia gibba HOM05D006406 ORTHO05D007883 1.8e-110 403.3 350 59.1
CARHR186230 Cardamine hirsuta HOM05D006406 ORTHO05D007883 7.0e-110 401.4 308 62.0
PSO210G1688 Papaver somniferum HOM05D006406 ORTHO05D007883 2.0e-109 399.8 340 60.6
FAN05G5419 Fragaria x ananassa HOM05D006406 ORTHO05D007883 5.9e-109 398.3 305 64.9
ECA236G2290 Erigeron canadensis HOM05D006406 ORTHO05D007883 7.7e-109 397.9 284 66.2
PSO210G1514 Papaver somniferum HOM05D006406 ORTHO05D007883 7.7e-109 397.9 339 59.6
AUR62000764 Chenopodium quinoa HOM05D006406 ORTHO05D007883 1.3e-108 397.1 295 64.4
Migut.N01744 Erythranthe guttata HOM05D006406 ORTHO05D007883 1.5e-107 393.7 342 58.8
BcaC04g23642 Brassica carinata HOM05D006406 ORTHO05D007883 5.5e-107 391.7 342 57.6
Lsat_1_v5_gn_9_88181 Lactuca sativa HOM05D006406 ORTHO05D007883 8.0e-106 387.9 317 61.2
C09p05890 Brassica napus HOM05D006406 ORTHO05D007883 3.0e-105 386.0 343 57.7
BolC9t53515H Brassica oleracea HOM05D006406 ORTHO05D007883 3.0e-105 386.0 343 57.7
HanXRQChr11g0339311 Helianthus annuus HOM05D006406 ORTHO05D007883 9.8e-104 380.9 313 61.3
Dinv30810 Davidia involucrata HOM05D006406 ORTHO05D007883 2.4e-102 376.3 284 64.1
Ah.06g189770 Amaranthus hybridus HOM05D006406 ORTHO05D007883 5.9e-101 371.7 266 66.9
Cc02_g34120 Coffea canephora HOM05D006406 ORTHO05D007883 7.8e-101 371.3 215 79.1
Os07g0673000 Oryza sativa ssp. japonica HOM05D006406 ORTHO05D007883 2.3e-100 369.8 266 63.5
AUR62005205 Chenopodium quinoa HOM05D006406 ORTHO05D007883 3.9e-100 369.0 308 59.1
CDE11G0411 Ceratophyllum demersum HOM05D001335 ORTHO05D001184 3.3e-99 365.9 303 57.8
ATR0796G153 Amborella trichopoda HOM05D006406 ORTHO05D007883 9.5e-99 364.4 284 60.2
Glyma.19G233500 Glycine max HOM05D006406 ORTHO05D007883 2.0e-96 356.7 285 63.9
DCAR_029393 Daucus carota HOM05D006406 ORTHO05D007883 2.5e-91 339.7 349 50.7
SEGI_05797 Sequoiadendron giganteum HOM05D006406 ORTHO05D007883 2.6e-88 329.7 300 53.7
FvH4_6g06560 Fragaria vesca HOM05D006406 ORTHO05D007883 1.1e-83 314.3 245 63.3
MELO3C015308.2 Cucumis melo HOM05D006406 ORTHO05D007883 8.1e-82 308.1 343 48.4
Hma1.2p1_1212F.1_g267270 Hydrangea macrophylla HOM05D006406 ORTHO05D007883 9.2e-70 268.1 220 60.5
SMO172G0153 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 2.3e-68 263.5 287 45.3
Mapoly0054s0047 Marchantia polymorpha HOM05D006406 ORTHO05D007883 9.6e-67 258.1 297 44.8
SMO172G0232 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 9.6e-67 258.1 284 44.7
Pp3c6_26830 Physcomitrium patens HOM05D006406 ORTHO05D007883 1.6e-66 257.3 228 50.0
Zm00001eb111280 Zea mays HOM05D006406 ORTHO05D007883 4.8e-66 255.8 203 57.1
Oeu043349.1 Olea europaea HOM05D006406 ORTHO05D007883 2.4e-65 253.4 222 59.9
PGSC0003DMG400024710 Solanum tuberosum HOM05D006406 ORTHO05D007883 7.1e-62 241.9 193 61.1
HPP92_011843 Vanilla planifolia HOM05D006406 ORTHO05D007883 1.9e-59 233.8 304 42.1
CBR_g19246 Chara braunii HOM05D006406 ORTHO05D007883 3.2e-54 216.5 233 43.3
SMO198G0100 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 1.5e-48 197.6 306 37.6
arahy.Tifrunner.gnm1.ann1.AST3BR Arachis hypogaea HOM05D006406 ORTHO05D007883 1.0e-47 194.9 164 57.9
PSO421G0497 Papaver somniferum HOM05D006406 ORTHO05D007883 1.9e-46 190.7 310 36.5
FAN02G3513 Fragaria x ananassa HOM05D006406 ORTHO05D007883 3.4e-32 143.3 159 49.1
AagrBONN_evm.TU.Sc2ySwM_362.2555 Anthoceros agrestis HOM05D006406 ORTHO05D007883 7.7e-32 142.1 106 57.5
MSTRG.16393 Avicennia marina HOM05D006406 ORTHO05D007883 1.4e-30 137.9 171 46.8
BcaB07g32734 Brassica carinata HOM05D006406 ORTHO05D007883 2.3e-20 104.0 146 43.8
Lsat_1_v5_gn_5_186620 Lactuca sativa HOM05D006406 ORTHO05D007883 7.7e-16 89.0 169 37.9
AL3G41450 Arabidopsis lyrata HOM05D000059 ORTHO05D000128 1.3e-10 71.6 41 73.2
Aqoxy601s001 Aquilegia oxysepala HOM05D006406 ORTHO05D007883 1.8e-09 67.8 33 87.9
Cre09.g392700 Chlamydomonas reinhardtii HOM05D006406 ORTHO05D007883 1.7e-07 61.2 101 38.6
SMO172G0225 Selaginella moellendorffii HOM05D006406 ORTHO05D007883 4.2e-06 56.6 119 29.4


User provided reference genes

Program Settings