Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G115600 Manihot esculenta HOM05D007682 ORTHO05D009690 2.2e-44 183.0 190 100.0
Haze_04118 Corylus avellana HOM05D007682 ORTHO05D009690 4.2e-27 125.6 114 65.8
Hma1.2p1_0472F.1_g159680 Hydrangea macrophylla HOM05D007682 ORTHO05D009690 2.1e-26 123.2 107 82.2
Cc02_g34370 Coffea canephora HOM05D007682 ORTHO05D009690 9.7e-24 114.4 107 82.2
CiPaw.08G159600 Carya illinoinensis HOM05D007682 ORTHO05D009690 6.3e-23 111.7 105 79.0
PSO407G0292 Papaver somniferum HOM05D007682 ORTHO05D009690 1.1e-22 110.9 103 78.6
GSVIVG01031165001 Vitis vinifera HOM05D000036 ORTHO05D000441 1.4e-22 110.5 103 83.5
Gorai.007G301900 Gossypium raimondii HOM05D007682 ORTHO05D009690 2.4e-22 109.8 61 95.1
Prupe.8G021600 Prunus persica HOM05D007682 ORTHO05D009690 2.4e-22 109.8 61 95.1
HPP92_010663 Vanilla planifolia HOM05D007682 ORTHO05D009690 2.4e-22 109.8 110 72.7
FAN20G0672 Fragaria x ananassa HOM05D007682 ORTHO05D009690 6.9e-22 108.2 61 93.4
FAN24G1339 Fragaria x ananassa HOM05D007682 ORTHO05D009690 6.9e-22 108.2 61 93.4
Gohir.D11G279700 Gossypium hirsutum HOM05D007682 ORTHO05D009690 6.9e-22 108.2 61 93.4
Gohir.A11G269500 Gossypium hirsutum HOM05D007682 ORTHO05D009690 9.0e-22 107.8 61 93.4
Gohir.A08G208100 Gossypium hirsutum HOM05D007682 ORTHO05D009690 1.2e-21 107.5 61 93.4
Peaxi162Scf00037g01515 Petunia axillaris HOM05D007682 ORTHO05D009690 1.2e-21 107.5 61 91.8
RcHm_v2.0_Chr6g0276771 Rosa chinensis HOM05D007682 ORTHO05D009690 1.5e-21 107.1 61 91.8
Medtr7g112600 Medicago truncatula HOM05D007682 ORTHO05D009690 2.6e-21 106.3 61 91.8
Nn4g25761 Nelumbo nucifera HOM05D007682 ORTHO05D009690 2.6e-21 106.3 61 91.8
Psat3g011680 Pisum sativum HOM05D007682 ORTHO05D009690 2.6e-21 106.3 61 91.8
Potri.005G023000 Populus trichocarpa HOM05D007682 ORTHO05D009690 2.6e-21 106.3 61 93.4
arahy.Tifrunner.gnm1.ann1.P6132C Arachis hypogaea HOM05D007682 ORTHO05D009690 3.4e-21 105.9 61 91.8
arahy.Tifrunner.gnm1.ann1.S47DRU Arachis hypogaea HOM05D007682 ORTHO05D009690 3.4e-21 105.9 61 91.8
Atru.chr2.100 Acer truncatum HOM05D007682 ORTHO05D009690 4.5e-21 105.5 61 91.8
Nitab4.5_0003113g0070 Nicotiana tabacum HOM05D007682 ORTHO05D009690 4.5e-21 105.5 61 90.2
Duzib177G0692 Durio zibethinus HOM05D007682 ORTHO05D009690 5.9e-21 105.1 59 94.9
MD10G1017700 Malus domestica HOM05D007682 ORTHO05D009690 5.9e-21 105.1 61 91.8
TPR.G1619 Trifolium pratense HOM05D007682 ORTHO05D009690 5.9e-21 105.1 61 90.2
Glyma.03G234200 Glycine max HOM05D007682 ORTHO05D009690 7.7e-21 104.8 61 91.8
Gohir.D08G224900 Gossypium hirsutum HOM05D007682 ORTHO05D009690 1.0e-20 104.4 61 90.2
PSO170G1207 Papaver somniferum HOM05D007682 ORTHO05D009690 1.0e-20 104.4 61 90.2
CSS0049840 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 1.3e-20 104.0 61 90.2
Thecc.05G315600 Theobroma cacao HOM05D007682 ORTHO05D009690 1.3e-20 104.0 61 91.8
FAN15G0817 Fragaria x ananassa HOM05D007682 ORTHO05D009690 1.7e-20 103.6 61 90.2
Gorai.004G238900 Gossypium raimondii HOM05D007682 ORTHO05D009690 1.7e-20 103.6 61 90.2
Phvul.006G088300 Phaseolus vulgaris HOM05D007682 ORTHO05D009690 1.7e-20 103.6 61 90.2
Actinidia21502 Actinidia chinensis HOM05D007682 ORTHO05D009690 2.2e-20 103.2 61 90.2
Sabra05G0029000 Salix brachista HOM05D007682 ORTHO05D009690 2.2e-20 103.2 61 91.8
Lsat_1_v5_gn_7_72960 Lactuca sativa HOM05D007682 ORTHO05D009690 3.8e-20 102.4 59 89.8
Os12g0516700 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 3.8e-20 102.4 61 83.6
Sed0011876 Sechium edule HOM05D007682 ORTHO05D009690 3.8e-20 102.4 61 88.5
Solyc01g099930.3 Solanum lycopersicum HOM05D007682 ORTHO05D009690 3.8e-20 102.4 59 89.8
ECA236G4368 Erigeron canadensis HOM05D000036 ORTHO05D000441 5.0e-20 102.1 59 89.8
Glyma.19G231600 Glycine max HOM05D007682 ORTHO05D009690 5.0e-20 102.1 114 67.5
Eucgr.H03256 Eucalyptus grandis HOM05D007682 ORTHO05D009690 6.5e-20 101.7 61 88.5
PGR031G1366 Punica granatum HOM05D007682 ORTHO05D009690 6.5e-20 101.7 61 88.5
Lalb_Chr15g0077471 Lupinus albus HOM05D007682 ORTHO05D009690 8.5e-20 101.3 61 88.5
AUR62000737 Chenopodium quinoa HOM05D007682 ORTHO05D009690 1.1e-19 100.9 60 88.3
CAN.G1273.42 Capsicum annuum HOM05D007682 ORTHO05D009690 1.9e-19 100.1 105 76.2
SGA_v2.0_scaffold81G26104 Striga asiatica HOM05D007682 ORTHO05D009690 1.9e-19 100.1 61 85.2
BcaNung04745 Brassica carinata HOM05D007682 ORTHO05D009690 2.5e-19 99.8 59 88.1
THA.LOC104818730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 2.5e-19 99.8 61 86.9
TAR633G0769 Trochodendron aralioides HOM05D007682 ORTHO05D009690 2.5e-19 99.8 113 68.1
AUR62005227 Chenopodium quinoa HOM05D007682 ORTHO05D009690 5.5e-19 98.6 60 85.0
QL03p019528 Quercus lobata HOM05D007682 ORTHO05D009690 5.5e-19 98.6 60 85.0
Sp2g20980 Schrenkiella parvula HOM05D007682 ORTHO05D009690 5.5e-19 98.6 59 88.1
TWI56G1223 Tripterygium wilfordii HOM05D007682 ORTHO05D009690 5.5e-19 98.6 105 75.2
CDE05G1347 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 7.2e-19 98.2 58 87.9
CsaV3_1G038640 Cucumis sativus L. HOM05D007682 ORTHO05D009690 7.2e-19 98.2 61 85.2
Os12g0554000 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 7.2e-19 98.2 107 70.1
A06p37270 Brassica napus HOM05D007682 ORTHO05D009690 9.4e-19 97.8 59 86.4
C07p41180 Brassica napus HOM05D007682 ORTHO05D009690 9.4e-19 97.8 59 86.4
BolC7t44646H Brassica oleracea HOM05D007682 ORTHO05D009690 9.4e-19 97.8 59 86.4
BraA06t26650Z Brassica rapa HOM05D007682 ORTHO05D009690 9.4e-19 97.8 59 86.4
CARHR186340 Cardamine hirsuta HOM05D007682 ORTHO05D009690 9.4e-19 97.8 59 88.1
CDE11G0615 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 9.4e-19 97.8 61 83.6
THA.LOC104821730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 9.4e-19 97.8 99 79.8
Aa31LG11G9610 Aethionema arabicum HOM05D007682 ORTHO05D009690 1.2e-18 97.4 59 86.4
DCAR_022138 Daucus carota HOM05D007682 ORTHO05D009690 1.2e-18 97.4 59 86.4
Dinv30837 Davidia involucrata HOM05D007682 ORTHO05D009690 1.2e-18 97.4 61 85.2
Sc16g0008750 Simmondsia chinensis HOM05D000036 ORTHO05D001038 1.2e-18 97.4 61 85.2
AT5G27860 Arabidopsis thaliana HOM05D007682 ORTHO05D009690 2.7e-18 96.3 59 86.4
Oeu010924.1 Olea europaea HOM05D007682 ORTHO05D009690 2.7e-18 96.3 100 79.0
Cfa006654 Carpinus fangiana HOM05D007682 ORTHO05D009690 3.6e-18 95.9 61 83.6
MSTRG.27972 Avicennia marina HOM05D007682 ORTHO05D009690 6.1e-18 95.1 107 73.8
Migut.N02098 Erythranthe guttata HOM05D007682 ORTHO05D009690 6.1e-18 95.1 61 82.0
HanXRQChr11g0340111 Helianthus annuus HOM05D007682 ORTHO05D009690 6.1e-18 95.1 100 59.0
SMO367G0406 Selaginella moellendorffii HOM05D007682 ORTHO05D009690 1.4e-17 94.0 61 80.3
SEGI_39810 Sequoiadendron giganteum HOM05D007682 ORTHO05D009690 1.8e-17 93.6 59 81.4
Lj1g0016295 Lotus japonicus HOM05D007682 ORTHO05D009690 3.0e-17 92.8 110 70.9
Nitab4.5_0003497g0050 Nicotiana tabacum HOM05D007682 ORTHO05D009690 8.8e-17 91.3 52 90.4
CSS0031357 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 4.3e-16 89.0 61 78.7
Zm00001eb410110 Zea mays HOM05D007682 ORTHO05D009690 5.7e-16 88.6 63 73.0
MBI19_g44105_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 1.7e-15 87.0 54 85.2
Hund07111 Selenicereus undatus HOM05D007682 ORTHO05D009690 1.7e-15 87.0 79 65.8
AL6G39080 Arabidopsis lyrata HOM05D007682 ORTHO05D009690 2.8e-15 86.3 59 79.7
Ah.06g189950 Amaranthus hybridus HOM05D007682 ORTHO05D009690 3.7e-15 85.9 51 88.2
EL10Ac4g09894 Beta vulgaris HOM05D007682 ORTHO05D009690 6.3e-15 85.1 51 86.3
unitig_699.g19250 Utricularia gibba HOM05D007682 ORTHO05D009690 2.4e-14 83.2 105 61.0
HPP92_010684 Vanilla planifolia HOM05D007682 ORTHO05D009690 4.1e-14 82.4 53 86.8
ATR0693G225 Amborella trichopoda HOM05D007682 ORTHO05D009690 5.3e-14 82.0 52 82.7
DCAR_022140 Daucus carota HOM05D007682 ORTHO05D009690 2.9e-12 76.3 55 72.7
MBI19_g47767_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 2.1e-10 70.1 54 74.1
VMungo0540G1787 Vigna mungo HOM05D007682 ORTHO05D009690 7.4e-08 61.6 32 93.8
FvH4_2g14440 Fragaria vesca HOM05D007682 ORTHO05D009690 1.3e-07 60.8 34 85.3
COL.COLO4_10551 Corchorus olitorius HOM05D007682 ORTHO05D009690 1.4e-06 57.4 33 90.9


User provided reference genes

Program Settings