Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.3e-80 303.1 174 100.0
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 7.4e-63 244.2 174 77.0
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 3.4e-60 235.3 179 74.3
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 1.0e-59 233.8 174 75.3
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 5.0e-59 231.5 177 74.0
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 1.1e-58 230.3 176 73.3
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 3.2e-58 228.8 177 75.1
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 4.2e-58 228.4 179 77.7
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 2.1e-57 226.1 174 71.3
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 4.7e-57 224.9 175 71.4
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 2.3e-56 222.6 178 71.9
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 1.5e-55 219.9 176 73.9
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 1.5e-55 219.9 177 71.8
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 3.3e-55 218.8 177 68.4
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 5.7e-55 218.0 180 67.2
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 1.3e-54 216.9 176 67.0
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 1.3e-54 216.9 175 75.4
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 2.8e-54 215.7 175 68.0
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 4.8e-54 214.9 181 72.4
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 8.2e-54 214.2 177 71.8
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 1.1e-53 213.8 178 68.5
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 1.4e-53 213.4 174 74.7
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 2.4e-53 212.6 177 71.2
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 2.4e-53 212.6 178 71.3
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 4.1e-53 211.8 180 69.4
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 6.9e-53 211.1 180 65.0
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 6.9e-53 211.1 175 69.1
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 6.9e-53 211.1 180 75.6
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 9.1e-53 210.7 174 67.8
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 9.1e-53 210.7 176 68.2
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 9.1e-53 210.7 175 74.3
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.2e-52 210.3 176 70.5
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.2e-52 210.3 176 70.5
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 1.5e-52 209.9 183 66.7
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 2.0e-52 209.5 180 68.9
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 3.4e-52 208.8 174 65.5
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 3.4e-52 208.8 183 65.6
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 4.5e-52 208.4 174 66.1
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 5.9e-52 208.0 174 64.4
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 5.9e-52 208.0 174 66.7
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 5.9e-52 208.0 171 65.5
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 7.7e-52 207.6 183 65.6
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 1.0e-51 207.2 175 66.9
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 1.7e-51 206.5 178 74.2
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 1.7e-51 206.5 185 66.5
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 2.2e-51 206.1 184 66.3
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 2.9e-51 205.7 181 72.4
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.9e-51 205.7 179 66.5
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 5.0e-51 204.9 176 69.3
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 5.0e-51 204.9 176 69.3
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 5.0e-51 204.9 175 66.9
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 6.5e-51 204.5 176 70.5
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 8.5e-51 204.1 178 66.3
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 8.5e-51 204.1 182 66.5
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 8.5e-51 204.1 182 66.5
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 8.5e-51 204.1 179 66.5
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 1.1e-50 203.8 175 68.0
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.9e-50 203.0 175 65.1
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 1.9e-50 203.0 176 65.9
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 2.5e-50 202.6 175 65.1
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 2.5e-50 202.6 175 65.1
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 3.2e-50 202.2 178 65.2
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 4.2e-50 201.8 179 68.2
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 4.2e-50 201.8 175 65.1
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.6e-49 199.9 176 64.2
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 1.6e-49 199.9 175 70.3
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 2.1e-49 199.5 179 67.6
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 2.7e-49 199.1 176 65.3
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 3.6e-49 198.7 175 64.6
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 4.7e-49 198.4 181 64.1
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 8.0e-49 197.6 116 86.2
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 2.3e-48 196.1 138 75.4
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 2.3e-48 196.1 178 64.6
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 3.0e-48 195.7 138 75.4
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 3.9e-48 195.3 179 63.7
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 3.9e-48 195.3 179 63.7
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 3.9e-48 195.3 179 63.7
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 3.9e-48 195.3 130 76.9
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 6.7e-48 194.5 179 63.1
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 6.7e-48 194.5 174 70.1
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 8.8e-48 194.1 181 62.4
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 1.1e-47 193.7 179 61.5
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.1e-47 193.7 175 69.7
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 2.0e-47 193.0 137 74.5
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 2.0e-47 193.0 114 84.2
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 2.6e-47 192.6 138 74.6
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 4.4e-47 191.8 176 65.3
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 4.4e-47 191.8 173 67.1
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 7.4e-47 191.0 139 73.4
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 9.7e-47 190.7 129 78.3
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 9.7e-47 190.7 180 63.3
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 9.7e-47 190.7 180 63.3
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 1.7e-46 189.9 177 65.0
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.7e-46 189.9 181 61.9
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 2.2e-46 189.5 178 64.0
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 6.3e-46 188.0 181 63.0
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 1.8e-45 186.4 177 61.6
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 2.4e-45 186.0 178 64.0
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 3.1e-45 185.7 167 68.9
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 4.1e-45 185.3 175 68.6
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 4.1e-45 185.3 172 66.3
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 5.3e-45 184.9 116 80.2
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 1.2e-44 183.7 178 60.7
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 2.0e-44 183.0 181 63.5
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 2.0e-44 183.0 107 84.1
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 3.5e-44 182.2 166 63.9
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 3.5e-44 182.2 166 64.5
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 5.9e-44 181.4 110 83.6
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 5.9e-44 181.4 103 89.3
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 7.7e-44 181.0 131 75.6
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 1.0e-43 180.6 177 62.7
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 1.1e-42 177.2 132 72.7
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 3.2e-42 175.6 178 60.7
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 6.1e-41 171.4 175 60.6
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 2.9e-35 152.5 110 69.1
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 1.6e-33 146.7 85 84.7
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 2.0e-31 139.8 143 58.0
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.3e-30 137.1 141 59.6
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 3.7e-30 135.6 134 52.2
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 4.8e-30 135.2 113 61.9
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 4.1e-29 132.1 124 55.6
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 2.0e-28 129.8 117 56.4
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 2.7e-28 129.4 132 52.3
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 3.3e-26 122.5 128 55.5
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 2.4e-21 106.3 141 42.6
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 5.4e-21 105.1 135 43.7
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 6.6e-19 98.2 128 50.8
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 5.2e-16 88.6 170 47.6
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 2.9e-06 56.2 100 29.0
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 3.7e-06 55.8 98 27.6
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 3.7e-06 55.8 100 29.0
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 8.3e-06 54.7 98 28.6
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 8.3e-06 54.7 98 28.6
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 8.3e-06 54.7 98 29.6


User provided reference genes

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