Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G090600 Manihot esculenta HOM05D007113 ORTHO05D008859 1.5e-43 179.5 119 100.0
GSVIVG01033979001 Vitis vinifera HOM05D007113 ORTHO05D008859 3.3e-30 135.2 117 65.0
RcHm_v2.0_Chr3g0463511 Rosa chinensis HOM05D007113 ORTHO05D008859 4.3e-30 134.8 119 67.2
MD12G1164000 Malus domestica HOM05D007113 ORTHO05D008859 9.6e-30 133.7 119 61.3
FAN09G0121 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.6e-29 132.9 119 61.3
FAN14G1367 Fragaria x ananassa HOM05D007113 ORTHO05D008859 2.1e-29 132.5 119 60.5
FvH4_6g11730 Fragaria vesca HOM05D007113 ORTHO05D008859 4.8e-29 131.3 119 60.5
FAN05G2893 Fragaria x ananassa HOM05D007113 ORTHO05D008859 1.1e-28 130.2 119 60.5
TWI74G0516 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 5.3e-28 127.9 119 62.2
MD04G1149600 Malus domestica HOM05D007113 ORTHO05D008859 6.9e-28 127.5 119 59.7
Potri.016G113700 Populus trichocarpa HOM05D007113 ORTHO05D008859 3.4e-27 125.2 119 58.8
Dinv34405 Davidia involucrata HOM05D007113 ORTHO05D008859 2.2e-26 122.5 117 58.1
Nn8g40109 Nelumbo nucifera HOM05D007113 ORTHO05D008859 2.2e-26 122.5 117 57.3
TWI77G0060 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 5.0e-26 121.3 117 59.8
FAN02G3283 Fragaria x ananassa HOM05D008730 ORTHO05D008859 1.4e-25 119.8 112 67.9
Hma1.2p1_0362F.1_g136060 Hydrangea macrophylla HOM05D007113 ORTHO05D008859 1.4e-25 119.8 115 57.4
Haze_20976 Corylus avellana HOM05D007113 ORTHO05D008859 1.9e-25 119.4 116 56.0
Thecc.05G019300 Theobroma cacao HOM05D007113 ORTHO05D008859 1.9e-25 119.4 118 66.1
Gohir.D01G216000 Gossypium hirsutum HOM05D007113 ORTHO05D008859 2.5e-25 119.0 118 55.1
Atru.chr8.2216 Acer truncatum HOM05D007113 ORTHO05D008859 4.2e-25 118.2 117 55.6
Cc02_g06720 Coffea canephora HOM05D007113 ORTHO05D008859 9.3e-25 117.1 123 67.5
Eucgr.K02991 Eucalyptus grandis HOM05D007113 ORTHO05D008859 9.3e-25 117.1 66 81.8
FAN14G0869 Fragaria x ananassa HOM05D008730 ORTHO05D010922 9.3e-25 117.1 112 67.0
Gorai.002G262200 Gossypium raimondii HOM05D007113 ORTHO05D008859 9.3e-25 117.1 118 54.2
PGR004G1045 Punica granatum HOM05D007113 ORTHO05D008859 9.3e-25 117.1 119 57.1
Duzib093G1147 Durio zibethinus HOM05D007113 ORTHO05D008859 1.2e-24 116.7 118 64.4
arahy.Tifrunner.gnm1.ann1.J29A80 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.6e-24 116.3 67 83.6
CANSAT35G0395 Cannabis sativa HOM05D007113 ORTHO05D008859 1.6e-24 116.3 120 55.0
Gohir.A01G226400 Gossypium hirsutum HOM05D007113 ORTHO05D008859 2.1e-24 115.9 118 54.2
Lj3g0022517 Lotus japonicus HOM05D007113 ORTHO05D008859 2.1e-24 115.9 118 52.5
VMungo1127G1807 Vigna mungo HOM05D007113 ORTHO05D008859 2.1e-24 115.9 114 55.3
Cfa017230 Carpinus fangiana HOM05D007113 ORTHO05D008859 2.7e-24 115.5 116 69.8
CDE03G0108 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 3.5e-24 115.2 117 53.8
ECA238G3418 Erigeron canadensis HOM05D007113 ORTHO05D008859 6.1e-24 114.4 115 53.0
Lsat_1_v5_gn_2_121221 Lactuca sativa HOM05D007113 ORTHO05D008859 6.1e-24 114.4 65 83.1
Ciclev10013049m.g Citrus clementina HOM05D007113 ORTHO05D008859 1.3e-23 113.2 117 53.8
Phvul.004G171400 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 1.3e-23 113.2 118 55.1
THA.LOC104805827 Tarenaya hassleriana HOM05D007113 ORTHO05D008859 1.3e-23 113.2 66 80.3
HanXRQChr14g0460151 Helianthus annuus HOM05D007113 ORTHO05D008859 3.0e-23 112.1 115 56.5
CDE04G2391 Ceratophyllum demersum HOM05D007113 ORTHO05D008859 3.9e-23 111.7 117 53.0
Glyma.03G063200 Glycine max HOM05D007113 ORTHO05D008859 3.9e-23 111.7 118 54.2
CARHR132730 Cardamine hirsuta HOM05D007113 ORTHO05D008859 8.7e-23 110.5 117 53.0
COL.COLO4_14561 Corchorus olitorius HOM05D007113 ORTHO05D008859 8.7e-23 110.5 120 54.2
Migut.F01372 Erythranthe guttata HOM05D007113 ORTHO05D008859 8.7e-23 110.5 119 51.3
arahy.Tifrunner.gnm1.ann1.62SCQ6 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.1e-22 110.2 63 84.1
CSS0048161 Camellia sinensis var. sinensis HOM05D007113 ORTHO05D008859 1.1e-22 110.2 121 52.9
Lsat_1_v5_gn_9_63261 Lactuca sativa HOM05D007113 ORTHO05D008859 1.1e-22 110.2 65 78.5
Phvul.010G003200 Phaseolus vulgaris HOM05D007113 ORTHO05D008859 1.5e-22 109.8 118 54.2
Lalb_Chr07g0193491 Lupinus albus HOM05D007113 ORTHO05D008859 1.9e-22 109.4 65 80.0
CiPaw.10G155700 Carya illinoinensis HOM05D007113 ORTHO05D008859 2.5e-22 109.0 116 67.2
TAR623G1648 Trochodendron aralioides HOM05D007113 ORTHO05D008859 3.3e-22 108.6 103 59.2
Nitab4.5_0000802g0080 Nicotiana tabacum HOM05D007113 ORTHO05D008859 4.3e-22 108.2 116 51.7
AT2G38140 Arabidopsis thaliana HOM05D007113 ORTHO05D008859 5.7e-22 107.8 66 75.8
C04p09540 Brassica napus HOM05D007113 ORTHO05D008859 5.7e-22 107.8 117 51.3
BolC4t22560H Brassica oleracea HOM05D007113 ORTHO05D008859 5.7e-22 107.8 117 51.3
DCAR_028817 Daucus carota HOM05D007113 ORTHO05D008859 5.7e-22 107.8 65 78.5
Aa31sc189G20 Aethionema arabicum HOM05D007113 ORTHO05D008859 1.3e-21 106.7 66 74.2
BraA05t19755Z Brassica rapa HOM05D007113 ORTHO05D008859 1.6e-21 106.3 66 74.2
Oeu028599.1 Olea europaea HOM05D007113 ORTHO05D008859 1.6e-21 106.3 117 50.4
A05p07890 Brassica napus HOM05D007113 ORTHO05D008859 2.2e-21 105.9 117 51.3
unitig_62.g23930 Utricularia gibba HOM05D000230 ORTHO05D000176 2.2e-21 105.9 66 71.2
Nitab4.5_0008493g0040 Nicotiana tabacum HOM05D007113 ORTHO05D008859 2.8e-21 105.5 116 50.9
Actinidia29691 Actinidia chinensis HOM05D007113 ORTHO05D008859 3.7e-21 105.1 66 77.3
SalBow6G1146 Salvia bowleyana HOM05D007113 ORTHO05D008859 3.7e-21 105.1 66 71.2
ATR0618G049 Amborella trichopoda HOM05D007113 ORTHO05D008859 4.8e-21 104.8 65 75.4
Solyc05g052710.3 Solanum lycopersicum HOM05D007113 ORTHO05D008859 4.8e-21 104.8 120 51.7
ClCG04G007070 Citrullus lanatus HOM05D007113 ORTHO05D008859 6.3e-21 104.4 66 74.2
Nitab4.5_0004338g0130 Nicotiana tabacum HOM05D007113 ORTHO05D008859 8.2e-21 104.0 65 75.4
Sopen05g031230 Solanum pennellii HOM05D007113 ORTHO05D008859 8.2e-21 104.0 120 50.8
PGSC0003DMG400027129 Solanum tuberosum HOM05D007113 ORTHO05D008859 8.2e-21 104.0 120 50.8
Glyma.01G114800 Glycine max HOM05D007113 ORTHO05D008859 1.1e-20 103.6 118 51.7
PSO339G1456 Papaver somniferum HOM05D007113 ORTHO05D008859 1.1e-20 103.6 68 73.5
PSO384G2929 Papaver somniferum HOM05D007113 ORTHO05D008859 1.1e-20 103.6 68 73.5
MELO3C003245.2 Cucumis melo HOM05D007113 ORTHO05D008859 1.4e-20 103.2 66 72.7
CsaV3_4G026180 Cucumis sativus L. HOM05D007113 ORTHO05D008859 6.9e-20 100.9 66 69.7
TPR.G13351 Trifolium pratense HOM05D007113 ORTHO05D008859 6.9e-20 100.9 65 72.3
Sc11g0007190 Simmondsia chinensis HOM05D007113 ORTHO05D008859 9.0e-20 100.5 63 73.0
CAN.G503.7 Capsicum annuum HOM05D007113 ORTHO05D008859 1.2e-19 100.1 118 50.0
Medtr4g015540 Medicago truncatula HOM05D007113 ORTHO05D008859 1.2e-19 100.1 114 50.0
Sed0004762 Sechium edule HOM05D007113 ORTHO05D008859 1.2e-19 100.1 66 71.2
Aqoxy4G02617 Aquilegia oxysepala HOM05D007113 ORTHO05D008859 1.5e-19 99.8 66 69.7
HPP92_019871 Vanilla planifolia HOM05D007113 ORTHO05D008859 1.5e-19 99.8 119 49.6
vmacro06980 Vaccinium macrocarpon HOM05D007113 ORTHO05D008859 7.7e-19 97.4 115 47.8
Zm00001eb144250 Zea mays HOM05D007113 ORTHO05D008859 1.7e-18 96.3 67 64.2
Peaxi162Scf00957g00229 Petunia axillaris HOM05D011221 ORTHO05D013370 2.9e-18 95.5 54 77.8
Psat7g246120 Pisum sativum HOM05D007113 ORTHO05D008859 3.8e-18 95.1 61 73.8
SGA_v2.0_scaffold20G09268 Striga asiatica HOM05D007113 ORTHO05D008859 3.8e-18 95.1 56 75.0
SGA_v2.0_scaffold78G25464 Striga asiatica HOM05D007113 ORTHO05D008859 3.8e-18 95.1 65 66.2
TWI53G1153 Tripterygium wilfordii HOM05D007113 ORTHO05D008859 3.8e-18 95.1 67 71.6
Oeu025646.1 Olea europaea HOM05D007113 ORTHO05D008859 8.5e-18 94.0 76 65.8
Ca_20298_v3 Cicer arietinum L. HOM05D007113 ORTHO05D008859 1.4e-17 93.2 120 46.7
Os05g0186000 Oryza sativa ssp. japonica HOM05D007113 ORTHO05D008859 1.9e-17 92.8 67 62.7
Rhsim03G0141800 Rhododendron simsii HOM05D007113 ORTHO05D008859 1.2e-16 90.1 138 41.3
SEGI_10938 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 2.3e-15 85.9 66 65.2
SEGI_38672 Sequoiadendron giganteum HOM05D007113 ORTHO05D008859 2.3e-15 85.9 66 65.2
Lsat_1_v5_gn_9_63281 Lactuca sativa HOM05D005832 ORTHO05D007117 3.9e-15 85.1 56 67.9
Haze_17209 Corylus avellana HOM05D007113 ORTHO05D008859 2.0e-14 82.8 54 70.4
Hund23901 Selenicereus undatus HOM05D007113 ORTHO05D008859 2.0e-14 82.8 105 47.6
QL08p062975 Quercus lobata HOM05D007113 ORTHO05D008859 7.4e-14 80.9 108 45.4
Ah.16g103370 Amaranthus hybridus HOM05D007113 ORTHO05D008859 1.3e-13 80.1 56 67.9
EL10Ac2g04810 Beta vulgaris HOM05D007113 ORTHO05D008859 1.3e-13 80.1 56 71.4
arahy.Tifrunner.gnm1.ann1.C0BXE8 Arachis hypogaea HOM05D007113 ORTHO05D008859 2.2e-13 79.3 55 65.5
Carub.0004s2011 Capsella rubella HOM05D007113 ORTHO05D008859 2.2e-13 79.3 117 45.3
Sp4g20460 Schrenkiella parvula HOM05D007113 ORTHO05D008859 2.2e-13 79.3 120 44.2
Thhalv10017376m.g Eutrema salsugineum HOM05D007113 ORTHO05D008859 4.8e-13 78.2 120 44.2
AL4G35140 Arabidopsis lyrata HOM05D007113 ORTHO05D008859 1.4e-12 76.6 66 59.1
Mapoly0005s0194 Marchantia polymorpha HOM05D007113 ORTHO05D008859 3.1e-12 75.5 65 53.8
arahy.Tifrunner.gnm1.ann1.CDY6H8 Arachis hypogaea HOM05D007113 ORTHO05D008859 1.2e-11 73.6 55 61.8
AagrBONN_evm.TU.Sc2ySwM_362.1890 Anthoceros agrestis HOM05D007113 ORTHO05D008859 1.5e-11 73.2 66 56.1
Sabra16G0109100 Salix brachista HOM05D007113 ORTHO05D008859 7.7e-11 70.9 116 45.7
Prupe.6G274500 Prunus persica HOM05D007113 ORTHO05D008859 4.2e-09 65.1 84 57.1
VMungo0331G1181 Vigna mungo HOM05D007113 ORTHO05D008859 9.4e-09 63.9 67 55.2
Pp3c15_12810 Physcomitrium patens HOM05D007113 ORTHO05D008859 1.2e-08 63.5 66 50.0
Pp3c9_12290 Physcomitrium patens HOM05D007113 ORTHO05D008859 2.1e-08 62.8 66 48.5


User provided reference genes

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