Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 4.8e-88 327.8 163 100.0
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 8.5e-45 184.1 104 80.8
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 9.4e-44 180.6 153 62.1
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 9.4e-44 180.6 132 65.9
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 1.6e-43 179.9 161 62.7
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 1.0e-42 177.2 99 82.8
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 1.8e-42 176.4 157 61.1
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 2.3e-42 176.0 139 63.3
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 6.8e-42 174.5 141 62.4
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 4.4e-41 171.8 142 62.0
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 3.7e-40 168.7 162 58.0
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 4.8e-40 168.3 141 61.7
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 6.3e-40 167.9 157 58.0
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 1.1e-39 167.2 100 77.0
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 1.1e-39 167.2 161 56.5
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 1.1e-39 167.2 123 65.0
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 1.4e-39 166.8 106 73.6
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 1.4e-39 166.8 110 68.2
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.4e-39 166.8 141 59.6
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 1.4e-39 166.8 86 87.2
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.8e-39 166.4 158 57.6
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 4.1e-39 165.2 84 85.7
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 7.0e-39 164.5 161 55.9
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 9.1e-39 164.1 141 60.3
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.2e-38 163.7 141 58.9
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 1.6e-38 163.3 158 57.0
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 1.6e-38 163.3 123 65.0
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 2.0e-38 162.9 157 56.7
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 2.7e-38 162.5 120 65.0
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 2.7e-38 162.5 84 85.7
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 2.7e-38 162.5 115 72.2
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 3.5e-38 162.2 162 55.6
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 4.5e-38 161.8 86 82.6
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 4.5e-38 161.8 110 73.6
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 4.5e-38 161.8 104 71.2
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 7.7e-38 161.0 120 65.0
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 7.7e-38 161.0 115 67.0
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 1.3e-37 160.2 162 52.5
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 2.2e-37 159.5 120 64.2
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 2.2e-37 159.5 160 56.9
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 2.9e-37 159.1 108 67.6
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 3.8e-37 158.7 142 59.2
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 3.8e-37 158.7 122 63.9
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 5.0e-37 158.3 83 86.7
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 6.5e-37 157.9 142 57.7
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 6.5e-37 157.9 95 73.7
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 8.5e-37 157.5 120 66.7
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 8.5e-37 157.5 160 53.1
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 1.1e-36 157.1 103 71.8
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 1.5e-36 156.8 148 57.4
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 1.5e-36 156.8 144 61.8
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 1.9e-36 156.4 104 67.3
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 1.9e-36 156.4 110 70.9
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 2.5e-36 156.0 112 64.3
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 2.5e-36 156.0 115 65.2
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 3.2e-36 155.6 154 55.2
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 3.2e-36 155.6 139 57.6
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 4.2e-36 155.2 104 68.3
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 4.2e-36 155.2 114 64.0
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 4.2e-36 155.2 109 67.0
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 5.5e-36 154.8 154 55.2
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 7.2e-36 154.5 102 65.7
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 9.4e-36 154.1 138 57.2
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 2.1e-35 152.9 113 62.8
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 2.7e-35 152.5 97 70.1
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 4.7e-35 151.8 162 49.4
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 4.7e-35 151.8 153 56.2
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 6.1e-35 151.4 162 53.7
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 6.1e-35 151.4 71 88.7
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 1.4e-34 150.2 94 72.3
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 2.3e-34 149.4 86 76.7
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 4.0e-34 148.7 154 50.6
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 1.2e-33 147.1 86 75.6
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 3.4e-33 145.6 71 88.7
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 4.4e-33 145.2 71 88.7
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 7.5e-33 144.4 120 61.7
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 2.8e-32 142.5 160 48.1
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 1.8e-31 139.8 86 67.4
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 2.4e-31 139.4 93 69.9
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 4.1e-31 138.7 144 56.2
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 1.6e-30 136.7 89 67.4
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 3.5e-30 135.6 136 56.6
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 3.5e-30 135.6 80 72.5
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 1.3e-29 133.7 99 68.7
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.3e-29 133.7 67 89.6
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 2.3e-29 132.9 144 55.6
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 2.3e-29 132.9 90 71.1
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 9.5e-28 127.5 64 85.9
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 1.2e-27 127.1 95 68.4
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 2.1e-27 126.3 104 62.5
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 3.6e-27 125.6 64 82.8
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 6.1e-27 124.8 109 59.6
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 6.1e-27 124.8 73 76.7
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 1.5e-25 120.2 75 72.0
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 2.8e-24 115.9 148 46.6
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 6.3e-24 114.8 76 60.5
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 1.1e-23 114.0 67 77.6
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 6.1e-19 98.2 78 62.8
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 3.4e-17 92.4 70 64.3
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 7.5e-17 91.3 63 55.6
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 1.9e-07 60.1 37 70.3


User provided reference genes

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