Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G060951 Manihot esculenta HOM05D008349 ORTHO05D010116 5.7e-49 197.2 96 100.0
Manes.09G003300 Manihot esculenta HOM05D008349 ORTHO05D010116 1.2e-30 136.3 103 69.9
Potri.016G034950 Populus trichocarpa HOM05D008349 ORTHO05D010116 1.1e-26 123.2 97 67.0
Potri.006G036700 Populus trichocarpa HOM05D008349 ORTHO05D010116 6.4e-24 114.0 99 66.7
QL07p011743 Quercus lobata HOM05D008349 ORTHO05D010116 4.6e-22 107.8 96 62.5
Nn7g36871 Nelumbo nucifera HOM05D008349 ORTHO05D010116 4.3e-20 101.3 96 55.2
CiPaw.09G049400 Carya illinoinensis HOM05D008349 ORTHO05D010116 9.5e-20 100.1 97 60.8
Thecc.05G124300 Theobroma cacao HOM05D008349 ORTHO05D010116 8.1e-19 97.1 98 56.1
CiPaw.10G041900 Carya illinoinensis HOM05D008349 ORTHO05D010116 1.4e-18 96.3 97 59.8
Cfa019988 Carpinus fangiana HOM05D008349 ORTHO05D010116 1.5e-17 92.8 87 58.6
Dinv22212 Davidia involucrata HOM05D008349 ORTHO05D010116 5.8e-17 90.9 96 54.2
Prupe.7G031000 Prunus persica HOM05D008349 ORTHO05D010116 7.1e-15 84.0 98 48.0
EL10Ac3g07259 Beta vulgaris HOM05D008349 ORTHO05D010116 3.5e-14 81.6 100 48.0
Sabra16G0037400 Salix brachista HOM05D008349 ORTHO05D010116 3.5e-14 81.6 86 54.7
Dinv21476 Davidia involucrata HOM05D001268 ORTHO05D010116 1.0e-13 80.1 79 60.8
QL01p016614 Quercus lobata HOM05D008349 ORTHO05D010116 3.0e-13 78.6 86 54.7
TAR622G0427 Trochodendron aralioides HOM05D008349 ORTHO05D010116 6.6e-13 77.4 78 53.8
TAR633G0966 Trochodendron aralioides HOM05D008349 ORTHO05D010116 6.6e-13 77.4 78 53.8
CANSAT64G0841 Cannabis sativa HOM05D008349 ORTHO05D010116 4.3e-12 74.7 97 50.5
Rhsim04G0113000 Rhododendron simsii HOM05D008349 ORTHO05D010116 5.6e-12 74.3 93 48.4
Cpa.g.sc92.87 Carica papaya HOM05D008349 ORTHO05D010116 2.8e-11 72.0 106 47.2
Hma1.2p1_0460F.1_g157620 Hydrangea macrophylla HOM05D008349 ORTHO05D010116 6.8e-10 67.4 90 44.4
CiPaw.13G148400 Carya illinoinensis HOM05D008349 ORTHO05D010116 8.9e-10 67.0 87 47.1
COL.COLO4_23432 Corchorus olitorius HOM05D008349 ORTHO05D010116 1.5e-09 66.2 106 42.5
TPR.G16083 Trifolium pratense HOM05D008349 ORTHO05D010116 2.0e-09 65.9 55 58.2
Potri.009G068800 Populus trichocarpa HOM05D008349 ORTHO05D010116 2.6e-09 65.5 86 41.9
Phvul.001G120900 Phaseolus vulgaris HOM05D008349 ORTHO05D010116 3.4e-09 65.1 61 52.5
Glyma.19G128400 Glycine max HOM05D008349 ORTHO05D010116 7.6e-09 63.9 59 54.2
TAR636G0649 Trochodendron aralioides HOM05D008349 ORTHO05D010116 7.6e-09 63.9 78 51.3
Ciclev10013196m.g Citrus clementina HOM05D008349 ORTHO05D010116 1.3e-08 63.2 97 44.3
Sabra09G0051800 Salix brachista HOM05D008349 ORTHO05D010116 1.3e-08 63.2 84 39.3
Manes.02G138100 Manihot esculenta HOM05D008349 ORTHO05D010116 2.2e-08 62.4 89 43.8
Medtr7g089320 Medicago truncatula HOM05D008349 ORTHO05D010116 2.2e-08 62.4 86 45.3
Thecc.09G245500 Theobroma cacao HOM05D008349 ORTHO05D010116 2.9e-08 62.0 60 55.0
Gohir.A13G002000 Gossypium hirsutum HOM05D008349 ORTHO05D010116 4.9e-08 61.2 86 44.2
Gohir.D13G001400 Gossypium hirsutum HOM05D008349 ORTHO05D010116 4.9e-08 61.2 86 44.2
Gorai.013G001300 Gossypium raimondii HOM05D008349 ORTHO05D010116 4.9e-08 61.2 86 44.2
Oeu009528.1 Olea europaea HOM05D043181 ORTHO05D010116 8.4e-08 60.5 85 47.1
Potri.001G274200 Populus trichocarpa HOM05D008349 ORTHO05D010116 1.1e-07 60.1 86 34.9
Eucgr.B03753 Eucalyptus grandis HOM05D008349 ORTHO05D010116 1.4e-07 59.7 86 44.2
Glyma.03G125900 Glycine max HOM05D008349 ORTHO05D010116 1.4e-07 59.7 60 51.7
Medtr7g094080 Medicago truncatula HOM05D008349 ORTHO05D010116 3.2e-07 58.5 76 46.1
Atru.chr1.1408 Acer truncatum HOM05D008349 ORTHO05D010116 4.2e-07 58.2 48 62.5
DCAR_020585 Daucus carota HOM05D008349 ORTHO05D010116 7.1e-07 57.4 95 43.2
arahy.Tifrunner.gnm1.ann1.Y676PW Arachis hypogaea HOM05D012946 ORTHO05D010116 1.2e-06 56.6 81 44.4
Glyma.02G278000 Glycine max HOM05D012946 ORTHO05D010116 1.2e-06 56.6 85 43.5
Lalb_Chr22g0357621 Lupinus albus HOM05D008349 ORTHO05D010116 1.2e-06 56.6 97 40.2
Lalb_Chr24g0400421 Lupinus albus HOM05D008349 ORTHO05D010116 1.6e-06 56.2 64 46.9
Sopen10g031420 Solanum pennellii HOM05D008349 ORTHO05D010116 1.6e-06 56.2 91 41.8
Glyma.14G036500 Glycine max HOM05D012946 ORTHO05D010116 2.7e-06 55.5 79 41.8
Lj6g0008281 Lotus japonicus HOM05D012946 ORTHO05D010116 2.7e-06 55.5 76 43.4
Medtr5g089080 Medicago truncatula HOM05D012946 ORTHO05D010116 4.6e-06 54.7 81 39.5
arahy.Tifrunner.gnm1.ann1.K04G9P Arachis hypogaea HOM05D012946 ORTHO05D010116 6.0e-06 54.3 81 43.2
Cfa009902 Carpinus fangiana HOM05D008349 ORTHO05D010116 6.0e-06 54.3 90 42.2
DCAR_013649 Daucus carota HOM05D008349 ORTHO05D010116 6.0e-06 54.3 97 37.1
Lalb_Chr14g0365681 Lupinus albus HOM05D008349 ORTHO05D010116 6.0e-06 54.3 97 39.2
Lj1g0021932 Lotus japonicus HOM05D008349 ORTHO05D010116 7.8e-06 53.9 66 43.9


User provided reference genes

Program Settings