Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G053900 Manihot esculenta HOM05D007620 ORTHO05D009568 4.1e-73 280.0 170 100.0
Thecc.05G270800 Theobroma cacao HOM05D007620 ORTHO05D009568 7.8e-48 196.1 173 59.5
Duzib177G1032 Durio zibethinus HOM05D007620 ORTHO05D009568 4.0e-44 183.7 172 55.2
Hma1.2p1_1512F.1_g287900 Hydrangea macrophylla HOM05D007620 ORTHO05D009568 2.2e-42 177.9 170 55.9
Gohir.D11G257601 Gossypium hirsutum HOM05D007620 ORTHO05D009568 3.7e-42 177.2 173 52.6
Gorai.007G275900 Gossypium raimondii HOM05D007620 ORTHO05D009568 3.7e-42 177.2 173 52.6
Potri.019G019300 Populus trichocarpa HOM05D007620 ORTHO05D009568 1.1e-41 175.6 174 70.7
TAR362G1297 Trochodendron aralioides HOM05D007620 ORTHO05D009568 2.7e-40 171.0 170 62.9
Sabra13G0043000 Salix brachista HOM05D007620 ORTHO05D009568 1.1e-38 165.6 173 68.2
Dinv24674 Davidia involucrata HOM05D007620 ORTHO05D009568 4.3e-38 163.7 136 63.2
GSVIVG01023503001 Vitis vinifera HOM05D007620 ORTHO05D009568 4.3e-38 163.7 169 65.1
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 6.2e-37 159.8 173 64.2
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 6.2e-37 159.8 173 64.2
FvH4_6g01920 Fragaria vesca HOM05D007620 ORTHO05D009568 8.1e-37 159.5 173 64.2
RcHm_v2.0_Chr3g0449651 Rosa chinensis HOM05D007620 ORTHO05D009568 1.1e-36 159.1 177 63.8
Cfa006355 Carpinus fangiana HOM05D007620 ORTHO05D009568 1.4e-36 158.7 170 61.8
Potri.013G047000 Populus trichocarpa HOM05D007620 ORTHO05D009568 1.8e-36 158.3 174 64.9
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.3e-36 157.9 173 63.6
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 2.3e-36 157.9 173 52.6
QL03p030456 Quercus lobata HOM05D007620 ORTHO05D009568 1.5e-35 155.2 173 51.4
Haze_04424 Corylus avellana HOM05D007620 ORTHO05D009568 2.0e-35 154.8 170 48.8
Nn1g02811 Nelumbo nucifera HOM05D007620 ORTHO05D009568 3.4e-35 154.1 168 50.0
Atru.chr2.986 Acer truncatum HOM05D007620 ORTHO05D009568 1.7e-34 151.8 179 47.5
CSS0021218 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 3.5e-32 144.1 172 45.3
CSS0034254 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 3.5e-32 144.1 172 45.3
CSS0013452 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 1.3e-31 142.1 172 44.2
Ciclev10019446m.g Citrus clementina HOM05D007620 ORTHO05D009568 1.1e-30 139.0 174 47.7
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 2.5e-30 137.9 170 59.4
PGR004G2089 Punica granatum HOM05D007620 ORTHO05D009568 2.5e-30 137.9 170 60.0
MELO3C010128.2 Cucumis melo HOM05D007620 ORTHO05D009568 9.5e-30 136.0 168 45.2
ClCG03G009720 Citrullus lanatus HOM05D007620 ORTHO05D009568 2.1e-29 134.8 169 46.2
Lsat_1_v5_gn_8_24880 Lactuca sativa HOM05D007620 ORTHO05D009568 2.1e-29 134.8 170 40.0
Lalb_Chr06g0168291 Lupinus albus HOM05D007620 ORTHO05D009568 3.6e-29 134.0 174 58.6
CsaV3_1G045110 Cucumis sativus L. HOM05D007620 ORTHO05D009568 4.7e-29 133.7 171 46.8
MD04G1230300 Malus domestica HOM05D007620 ORTHO05D009568 8.1e-29 132.9 131 56.5
Lalb_Chr21g0311191 Lupinus albus HOM05D007620 ORTHO05D009568 4.0e-28 130.6 174 59.8
Eucgr.H04228 Eucalyptus grandis HOM05D007620 ORTHO05D009568 5.2e-28 130.2 171 58.5
PSO210G6557 Papaver somniferum HOM05D007620 ORTHO05D009568 2.6e-27 127.9 137 50.4
Cc02_g08810 Coffea canephora HOM05D007620 ORTHO05D009568 9.9e-27 125.9 167 44.3
Lj2C43T7 Lonicera japonica HOM05D007620 ORTHO05D009568 9.9e-27 125.9 149 43.0
Oeu026591.1 Olea europaea HOM05D007620 ORTHO05D009568 2.9e-26 124.4 132 48.5
CSS0031974 Camellia sinensis var. sinensis HOM05D007620 ORTHO05D009568 3.7e-26 124.0 170 41.2
MD12G1247400 Malus domestica HOM05D007620 ORTHO05D009568 3.7e-26 124.0 160 59.4
Aqoxy5G00210 Aquilegia oxysepala HOM05D007620 ORTHO05D009568 1.6e-24 118.6 135 47.4
EL10Ac4g09018 Beta vulgaris HOM05D007620 ORTHO05D009568 4.6e-24 117.1 170 36.5
Psat0s1841g0080 Pisum sativum HOM05D007620 ORTHO05D009568 7.8e-24 116.3 174 36.8
Peaxi162Scf00528g00227 Petunia axillaris HOM05D007620 ORTHO05D009568 1.3e-23 115.5 155 56.1
Sed0010835 Sechium edule HOM05D007620 ORTHO05D009568 1.7e-23 115.2 169 40.8
Solyc04g010060.2 Solanum lycopersicum HOM05D007620 ORTHO05D009568 1.7e-23 115.2 162 37.7
CDE04G2606 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 5.1e-23 113.6 169 40.2
Lj2C43T8 Lonicera japonica HOM05D007620 ORTHO05D009568 6.6e-23 113.2 137 48.2
AUR62004839 Chenopodium quinoa HOM05D007620 ORTHO05D009568 1.1e-22 112.5 135 40.7
Lj1g0023548 Lotus japonicus HOM05D007620 ORTHO05D009568 1.1e-22 112.5 134 44.0
AL3G14890 Arabidopsis lyrata HOM05D007620 ORTHO05D009568 1.5e-22 112.1 186 52.2
AT3G04760 Arabidopsis thaliana HOM05D007620 ORTHO05D009568 1.5e-22 112.1 190 51.1
AUR62040929 Chenopodium quinoa HOM05D007620 ORTHO05D009568 1.5e-22 112.1 135 40.7
TPR.G22332 Trifolium pratense HOM05D007620 ORTHO05D009568 1.5e-22 112.1 172 51.7
Carub.0003s0393 Capsella rubella HOM05D007620 ORTHO05D009568 1.9e-22 111.7 194 50.5
Lj5g0020911 Lotus japonicus HOM05D007620 ORTHO05D009568 1.9e-22 111.7 70 70.0
Sc09g0004220 Simmondsia chinensis HOM05D007620 ORTHO05D009568 1.9e-22 111.7 171 37.4
THA.LOC104801727 Tarenaya hassleriana HOM05D007620 ORTHO05D009568 1.9e-22 111.7 182 40.7
Migut.F00879 Erythranthe guttata HOM05D007620 ORTHO05D009568 4.3e-22 110.5 182 36.3
Gohir.A11G247300 Gossypium hirsutum HOM05D007620 ORTHO05D009568 4.3e-22 110.5 98 52.0
Phvul.008G151824 Phaseolus vulgaris HOM05D007620 ORTHO05D009568 4.3e-22 110.5 176 38.6
CANSAT21G0311 Cannabis sativa HOM05D007620 ORTHO05D009568 5.6e-22 110.2 151 41.7
Medtr1g080110 Medicago truncatula HOM05D007620 ORTHO05D009568 5.6e-22 110.2 143 44.1
Sp3g03610 Schrenkiella parvula HOM05D007620 ORTHO05D009568 5.6e-22 110.2 180 50.0
Ah.06g191910 Amaranthus hybridus HOM05D007620 ORTHO05D009568 9.6e-22 109.4 134 41.0
Glyma.20G222800 Glycine max HOM05D007620 ORTHO05D009568 1.6e-21 108.6 179 36.9
VMungo0720G2663 Vigna mungo HOM05D007620 ORTHO05D009568 3.6e-21 107.5 176 36.9
PGSC0003DMG400011475 Solanum tuberosum HOM05D007620 ORTHO05D009568 8.1e-21 106.3 159 51.6
Psat6g139880 Pisum sativum HOM05D007620 ORTHO05D009568 1.8e-20 105.1 132 43.2
CAN.G358.141 Capsicum annuum HOM05D007620 ORTHO05D009568 3.1e-20 104.4 151 53.0
C05p62520 Brassica napus HOM05D007620 ORTHO05D009568 1.2e-19 102.4 170 36.5
BolC5t34907H Brassica oleracea HOM05D007620 ORTHO05D009568 1.2e-19 102.4 170 37.1
Aa31LG5G15170 Aethionema arabicum HOM05D007620 ORTHO05D009568 2.0e-19 101.7 182 47.3
A05p42800 Brassica napus HOM05D007620 ORTHO05D009568 2.6e-19 101.3 170 36.5
BraA05t22972Z Brassica rapa HOM05D007620 ORTHO05D009568 2.6e-19 101.3 170 36.5
CARHR079010 Cardamine hirsuta HOM05D007620 ORTHO05D009568 2.6e-19 101.3 190 48.4
Glyma.10G166400 Glycine max HOM05D007620 ORTHO05D009568 5.8e-19 100.1 170 37.1
Psat0s1841g0040 Pisum sativum HOM05D007620 ORTHO05D009568 1.3e-18 99.0 132 40.9
COL.COLO4_15485 Corchorus olitorius HOM05D007620 ORTHO05D009568 2.9e-18 97.8 96 49.0
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 3.8e-18 97.4 121 42.1
Ca_09448_v3 Cicer arietinum L. HOM05D007620 ORTHO05D009568 9.3e-17 92.8 171 32.7
MD12G1247200 Malus domestica HOM05D007620 ORTHO05D009568 2.1e-16 91.7 98 48.0
Glyma.03G251200 Glycine max HOM05D007620 ORTHO05D009568 7.8e-16 89.7 108 44.4
PGR004G1481 Punica granatum HOM05D007620 ORTHO05D009568 7.8e-16 89.7 69 60.9
HPP92_005407 Vanilla planifolia HOM05D007620 ORTHO05D009568 7.3e-14 83.2 95 45.3
SGA_v2.0_scaffold13G06478 Striga asiatica HOM05D007620 ORTHO05D009568 3.6e-13 80.9 125 36.0
Prupe.6G350200 Prunus persica HOM05D007620 ORTHO05D009568 2.4e-12 78.2 76 81.6
ECA233G5729 Erigeron canadensis HOM05D007620 ORTHO05D009568 8.4e-10 69.7 76 42.1
COL.COLO4_15482 Corchorus olitorius HOM05D007620 ORTHO05D009568 1.1e-09 69.3 47 72.3
SalBow6G2000 Salvia bowleyana HOM05D007620 ORTHO05D009568 1.3e-07 62.4 76 39.5
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 3.3e-06 57.8 79 41.8
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 5.6e-06 57.0 81 42.0
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 5.6e-06 57.0 80 42.5
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 7.4e-06 56.6 64 46.9
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 9.6e-06 56.2 75 40.0


User provided reference genes

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