Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G052400 Manihot esculenta HOM05D007911 ORTHO05D009536 0.0e+00 1317.8 685 100.0
Potri.016G043300 Populus trichocarpa HOM05D007911 ORTHO05D009536 1.4e-128 464.5 781 43.1
Potri.006G046700 Populus trichocarpa HOM05D007911 ORTHO05D009536 1.8e-112 411.0 772 39.0
Sabra06G0032200 Salix brachista HOM05D007911 ORTHO05D009536 2.6e-103 380.6 762 37.8
Duzib093G1996 Durio zibethinus HOM05D007911 ORTHO05D009536 3.2e-93 347.1 777 35.6
Thecc.05G151800 Theobroma cacao HOM05D007911 ORTHO05D009536 7.4e-90 335.9 771 35.0
Haze_19798 Corylus avellana HOM05D007911 ORTHO05D009536 2.8e-89 334.0 720 36.7
Cfa016782 Carpinus fangiana HOM05D007911 ORTHO05D009536 2.9e-86 323.9 892 31.5
CiPaw.09G040100 Carya illinoinensis HOM05D007911 ORTHO05D009536 1.2e-79 302.0 774 35.1
Gohir.D01G119650 Gossypium hirsutum HOM05D007911 ORTHO05D009536 1.8e-72 278.1 759 32.5
Gorai.002G146100 Gossypium raimondii HOM05D007911 ORTHO05D009536 2.2e-70 271.2 769 32.1
COL.COLO4_33204 Corchorus olitorius HOM05D007911 ORTHO05D009536 8.5e-70 269.2 796 32.7
TWI53G0905 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 4.2e-69 266.9 712 32.9
Gohir.A01G130811 Gossypium hirsutum HOM05D007911 ORTHO05D009536 1.2e-68 265.4 735 32.9
Atru.chr12.1999 Acer truncatum HOM05D007911 ORTHO05D009536 1.4e-59 235.3 684 34.1
QL07p003623 Quercus lobata HOM05D007911 ORTHO05D009536 4.8e-57 226.9 1082 25.9
Cpa.g.sc1210.2 Carica papaya HOM05D007911 ORTHO05D009536 7.7e-55 219.5 788 30.3
RcHm_v2.0_Chr3g0483481 Rosa chinensis HOM05D020102 ORTHO05D009536 7.2e-53 213.0 791 28.6
TWI77G0280 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 3.7e-49 200.7 671 31.1
Prupe.7G054000 Prunus persica HOM05D007911 ORTHO05D009536 5.4e-40 170.2 452 33.2
Duzib106G0073 Durio zibethinus HOM05D007911 ORTHO05D009536 1.0e-38 166.0 142 60.6
FvH4_6g24470 Fragaria vesca HOM05D020102 ORTHO05D009536 1.3e-38 165.6 608 28.6
Phvul.001G129400 Phaseolus vulgaris HOM05D007911 ORTHO05D009536 1.9e-37 161.8 696 27.6
arahy.Tifrunner.gnm1.ann1.BL1IZ1 Arachis hypogaea HOM05D007911 ORTHO05D009536 9.4e-37 159.5 722 28.1
MELO3C026340.2 Cucumis melo HOM05D007911 ORTHO05D009536 1.2e-36 159.1 694 27.5
Ciclev10006879m.g Citrus clementina HOM05D007911 ORTHO05D009536 1.6e-36 158.7 128 57.0
Haze_19794 Corylus avellana HOM05D007911 ORTHO05D009536 1.6e-36 158.7 432 32.2
VMungo1383G2470 Vigna mungo HOM05D007911 ORTHO05D009536 1.6e-36 158.7 708 28.1
Atru.chr1.1239 Acer truncatum HOM05D007911 ORTHO05D009536 3.6e-36 157.5 132 62.1
arahy.Tifrunner.gnm1.ann1.18RKPD Arachis hypogaea HOM05D007911 ORTHO05D009536 1.0e-35 156.0 718 27.7
Actinidia39204 Actinidia chinensis HOM05D007911 ORTHO05D009536 6.8e-35 153.3 337 36.2
ClCG04G003660 Citrullus lanatus HOM05D007911 ORTHO05D009536 1.2e-34 152.5 685 26.9
TAR636G2018 Trochodendron aralioides HOM05D007911 ORTHO05D009536 2.0e-34 151.8 243 42.4
Glyma.03G133900 Glycine max HOM05D007911 ORTHO05D009536 7.5e-34 149.8 811 25.6
CANSAT80G1261 Cannabis sativa HOM05D007911 ORTHO05D009536 9.8e-34 149.4 178 46.1
Lj1g0009156 Lotus japonicus HOM05D007911 ORTHO05D009536 1.7e-33 148.7 724 27.6
Ca_08429_v3 Cicer arietinum L. HOM05D007911 ORTHO05D009536 2.7e-31 141.4 136 51.5
Lalb_Chr25g0287291 Lupinus albus HOM05D007911 ORTHO05D009536 2.7e-31 141.4 144 52.1
Actinidia09304 Actinidia chinensis HOM05D007911 ORTHO05D009536 3.5e-31 141.0 312 36.9
TPR.G18258 Trifolium pratense HOM05D007911 ORTHO05D009536 7.7e-31 139.8 480 27.5
Lalb_Chr01g0017411 Lupinus albus HOM05D007911 ORTHO05D009536 1.7e-30 138.7 144 52.8
CSS0030068 Camellia sinensis var. sinensis HOM05D007911 ORTHO05D009536 2.9e-30 137.9 552 28.8
Glyma.19G136200 Glycine max HOM05D007911 ORTHO05D009536 5.0e-30 137.1 779 25.5
Atru.chr1.1237 Acer truncatum HOM05D007911 ORTHO05D009536 1.1e-29 136.0 333 33.9
FAN09G4584 Fragaria x ananassa HOM05D020102 ORTHO05D009536 2.5e-29 134.8 131 51.9
Psat3g074440 Pisum sativum HOM05D007911 ORTHO05D009536 2.5e-29 134.8 274 34.3
Hma1.2p1_0005F.1_g004500 Hydrangea macrophylla HOM05D007911 ORTHO05D009536 7.2e-29 133.3 257 36.6
Nn2g15134 Nelumbo nucifera HOM05D007911 ORTHO05D009536 1.0e-27 129.4 228 37.3
MSTRG.6410 Avicennia marina HOM05D007911 ORTHO05D009536 1.8e-27 128.6 697 25.5
FAN14G4000 Fragaria x ananassa HOM05D020102 ORTHO05D009536 3.0e-27 127.9 720 26.2
Rhsim03G0028700 Rhododendron simsii HOM05D007911 ORTHO05D009536 3.0e-27 127.9 227 37.4
Eucgr.A02312 Eucalyptus grandis HOM05D007911 ORTHO05D009536 2.6e-26 124.8 703 25.9
Medtr7g091040 Medicago truncatula HOM05D007911 ORTHO05D009536 2.6e-26 124.8 140 48.6
CANSAT80G2434 Cannabis sativa HOM05D007911 ORTHO05D009536 9.8e-26 122.9 709 26.1
Nitab4.5_0000826g0230 Nicotiana tabacum HOM05D017238 ORTHO05D009536 3.7e-25 120.9 129 49.6
Nitab4.5_0001618g0290 Nicotiana tabacum HOM05D017238 ORTHO05D009536 1.4e-24 119.0 129 49.6
Sed0016742 Sechium edule HOM05D007911 ORTHO05D009536 2.4e-24 118.2 657 25.7
VMungo0720G0307 Vigna mungo HOM05D007911 ORTHO05D009536 2.4e-24 118.2 120 50.0
Oeu035501.1 Olea europaea HOM05D007911 ORTHO05D009536 3.2e-24 117.9 703 27.6
arahy.Tifrunner.gnm1.ann1.XA9LH2 Arachis hypogaea HOM05D007911 ORTHO05D009536 4.1e-24 117.5 116 50.9
Duzib106G0470 Durio zibethinus HOM05D007911 ORTHO05D009536 1.6e-23 115.5 230 42.2
vmacro21970 Vaccinium macrocarpon HOM05D007911 ORTHO05D009536 2.0e-23 115.2 210 38.1
PGR004G0024 Punica granatum HOM05D007911 ORTHO05D009536 3.5e-23 114.4 148 43.2
FAN05G5247 Fragaria x ananassa HOM05D020102 ORTHO05D009536 2.9e-22 111.3 126 48.4
CsaV3_4G027600 Cucumis sativus L. HOM05D007911 ORTHO05D009536 3.9e-22 110.9 682 26.0
Aqoxy1G00297 Aquilegia oxysepala HOM05D007911 ORTHO05D009536 2.1e-20 105.1 189 37.6
SGA_v2.0_scaffold105G30375 Striga asiatica HOM05D007911 ORTHO05D009536 1.8e-19 102.1 127 43.3
Medtr2g012890 Medicago truncatula HOM05D007911 ORTHO05D009536 4.0e-19 100.9 244 32.4
Ciclev10004930m.g Citrus clementina HOM05D007911 ORTHO05D044634 8.9e-19 99.8 400 28.0
AUR62026093 Chenopodium quinoa HOM05D021336 ORTHO05D009536 2.6e-18 98.2 212 32.5
SGA_v2.0_scaffold69G23124 Striga asiatica HOM05D007911 ORTHO05D009536 2.9e-17 94.7 203 32.5
Solyc04g016290.3 Solanum lycopersicum HOM05D017238 ORTHO05D009536 3.7e-17 94.4 129 41.9
PSO339G2888 Papaver somniferum HOM05D007911 ORTHO05D009536 4.9e-17 94.0 150 39.3
EL10Ac3g07134 Beta vulgaris HOM05D021336 ORTHO05D009536 8.3e-17 93.2 380 31.6
Sopen04g008390 Solanum pennellii HOM05D017238 ORTHO05D009536 1.1e-16 92.8 129 42.6
SalBow6G0990 Salvia bowleyana HOM05D007911 ORTHO05D009536 1.4e-16 92.4 155 39.4
SalBow6G1456 Salvia bowleyana HOM05D007911 ORTHO05D009536 1.9e-16 92.0 155 39.4
Cc06_g17980 Coffea canephora HOM05D007911 ORTHO05D009536 4.6e-15 87.4 111 43.2
PSO384G4398 Papaver somniferum HOM05D007911 ORTHO05D009536 7.8e-15 86.7 150 39.3
Hund19135 Selenicereus undatus HOM05D021336 ORTHO05D009536 2.3e-14 85.1 130 39.2
AUR62024506 Chenopodium quinoa HOM05D021336 ORTHO05D009536 8.6e-14 83.2 349 28.4
Hund24682 Selenicereus undatus HOM05D007911 ORTHO05D009536 4.3e-13 80.9 208 28.8
QL07p005404 Quercus lobata HOM05D007911 ORTHO05D009536 9.5e-13 79.7 252 32.5
Sc13g0001600 Simmondsia chinensis HOM05D007911 ORTHO05D009536 2.1e-12 78.6 344 25.0
Ciclev10005612m.g Citrus clementina HOM05D007911 ORTHO05D044634 2.8e-12 78.2 219 32.4
CAN.G676.9 Capsicum annuum HOM05D017238 ORTHO05D009536 6.2e-12 77.0 685 24.4
Ah.04g151450 Amaranthus hybridus HOM05D021336 ORTHO05D009536 3.1e-11 74.7 111 38.7
Peaxi162Scf00130g00827 Petunia axillaris HOM05D017238 ORTHO05D009536 5.2e-11 73.9 691 25.6
HanXRQChr08g0234551 Helianthus annuus HOM05D007911 ORTHO05D009536 9.8e-10 69.7 135 37.8
ECA247G2582 Erigeron canadensis HOM05D007911 ORTHO05D009536 1.1e-08 66.2 132 36.4
Lsat_1_v5_gn_9_31060 Lactuca sativa HOM05D007911 ORTHO05D009536 3.2e-08 64.7 261 28.7
Nitab4.5_0000677g0260 Nicotiana tabacum HOM05D029882 ORTHO05D009536 5.4e-08 63.9 87 42.5
Atru.chr1.1238 Acer truncatum HOM05D007911 ORTHO05D009536 4.6e-07 60.8 115 33.0
THA.LOC104804815 Tarenaya hassleriana HOM05D012091 ORTHO05D013971 4.6e-07 60.8 68 52.9
arahy.Tifrunner.gnm1.ann1.808QWK Arachis hypogaea HOM05D007911 ORTHO05D009536 1.3e-06 59.3 61 44.3
Lalb_Chr25g0287301 Lupinus albus HOM05D007911 ORTHO05D009536 5.1e-06 57.4 180 32.2


User provided reference genes

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