Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G045900 Manihot esculenta HOM05D004698 ORTHO05D005699 9.7e-124 446.8 224 100.0
Manes.08G046200 Manihot esculenta HOM05D004698 ORTHO05D005699 2.0e-116 422.5 224 93.8
Ciclev10016541m.g Citrus clementina HOM05D004698 ORTHO05D005699 1.5e-84 316.6 225 67.1
Prupe.6G018000 Prunus persica HOM05D004698 ORTHO05D005699 2.0e-81 306.2 221 66.5
PSO339G6590 Papaver somniferum HOM05D004698 ORTHO05D005699 1.7e-80 303.1 220 67.7
MD03G1018500 Malus domestica HOM05D004698 ORTHO05D005699 6.6e-80 301.2 222 66.2
Actinidia40436 Actinidia chinensis HOM05D004698 ORTHO05D005699 1.1e-79 300.4 221 65.2
Aqoxy1G00174 Aquilegia oxysepala HOM05D004698 ORTHO05D005699 1.1e-79 300.4 221 65.2
Duzib168G2110 Durio zibethinus HOM05D004698 ORTHO05D005699 1.1e-79 300.4 219 67.1
MELO3C015673.2 Cucumis melo HOM05D004698 ORTHO05D005699 1.5e-79 300.1 221 65.6
CsaV3_1G042380 Cucumis sativus L. HOM05D004698 ORTHO05D005699 3.3e-79 298.9 221 65.2
RcHm_v2.0_Chr5g0080391 Rosa chinensis HOM05D004698 ORTHO05D005699 7.3e-79 297.7 225 64.4
arahy.Tifrunner.gnm1.ann1.5V818H Arachis hypogaea HOM05D004698 ORTHO05D005699 1.2e-78 297.0 221 67.0
arahy.Tifrunner.gnm1.ann1.Y8WF3A Arachis hypogaea HOM05D004698 ORTHO05D005699 1.2e-78 297.0 221 67.0
Manes.14G015500 Manihot esculenta HOM05D004698 ORTHO05D005699 1.2e-78 297.0 221 64.3
Actinidia22026 Actinidia chinensis HOM05D004698 ORTHO05D005699 4.7e-78 295.0 221 66.1
Hma1.2p1_0183F.1_g080820 Hydrangea macrophylla HOM05D004698 ORTHO05D005699 6.2e-78 294.7 219 66.2
FvH4_3g44090 Fragaria vesca HOM05D004698 ORTHO05D005699 8.0e-78 294.3 221 64.7
FAN16G2726 Fragaria x ananassa HOM05D004698 ORTHO05D005699 1.4e-77 293.5 221 64.3
FAN25G1145 Fragaria x ananassa HOM05D004698 ORTHO05D005699 1.4e-77 293.5 221 64.3
Glyma.20G247000 Glycine max HOM05D004698 ORTHO05D005699 1.4e-77 293.5 221 64.7
Sc09g0000410 Simmondsia chinensis HOM05D004698 ORTHO05D005699 1.8e-77 293.1 221 66.5
Nn2g15650 Nelumbo nucifera HOM05D004698 ORTHO05D005699 3.1e-77 292.4 221 62.9
Cfa009658 Carpinus fangiana HOM05D004698 ORTHO05D005699 4.0e-77 292.0 221 63.8
Thhalv10014585m.g Eutrema salsugineum HOM05D004698 ORTHO05D005699 4.0e-77 292.0 221 62.4
FAN11G2375 Fragaria x ananassa HOM05D004698 ORTHO05D005699 4.0e-77 292.0 221 64.3
QL01p009119 Quercus lobata HOM05D004698 ORTHO05D005699 6.8e-77 291.2 222 63.1
Hund21659 Selenicereus undatus HOM05D004698 ORTHO05D005699 6.8e-77 291.2 223 65.0
TWI60G0418 Tripterygium wilfordii HOM05D004698 ORTHO05D005699 6.8e-77 291.2 221 65.2
Dinv08060 Davidia involucrata HOM05D004698 ORTHO05D005699 1.2e-76 290.4 221 65.2
Thecc.09G219100 Theobroma cacao HOM05D004698 ORTHO05D005699 1.2e-76 290.4 220 65.5
ATR0605G157 Amborella trichopoda HOM05D004698 ORTHO05D005699 1.5e-76 290.0 216 66.2
MSTRG.26088 Avicennia marina HOM05D004698 ORTHO05D005699 2.0e-76 289.7 220 62.7
VMungo0720G2032 Vigna mungo HOM05D004698 ORTHO05D005699 2.0e-76 289.7 221 63.8
Duzib150G1219 Durio zibethinus HOM05D004698 ORTHO05D005699 2.6e-76 289.3 221 64.3
CARHR193280 Cardamine hirsuta HOM05D004698 ORTHO05D005699 3.4e-76 288.9 221 62.9
Migut.K00041 Erythranthe guttata HOM05D004698 ORTHO05D005699 3.4e-76 288.9 221 62.9
CAN.G649.13 Capsicum annuum HOM05D004698 ORTHO05D005699 4.4e-76 288.5 226 62.8
FAN21G3006 Fragaria x ananassa HOM05D004698 ORTHO05D005699 4.4e-76 288.5 221 63.8
Atru.chr3.2431 Acer truncatum HOM05D004698 ORTHO05D005699 5.8e-76 288.1 221 63.8
BolC3t13583H Brassica oleracea HOM05D004698 ORTHO05D005699 5.8e-76 288.1 221 63.3
Eucgr.B03647 Eucalyptus grandis HOM05D004698 ORTHO05D005699 5.8e-76 288.1 223 61.0
Aa31LG7G13160 Aethionema arabicum HOM05D004698 ORTHO05D005699 7.5e-76 287.7 221 62.4
AL6G31140 Arabidopsis lyrata HOM05D004698 ORTHO05D005699 7.5e-76 287.7 222 61.7
C03p11130 Brassica napus HOM05D004698 ORTHO05D005699 7.5e-76 287.7 221 63.3
Phvul.007G003200 Phaseolus vulgaris HOM05D004698 ORTHO05D005699 7.5e-76 287.7 220 65.5
Atru.chr3.2436 Acer truncatum HOM05D004698 ORTHO05D005699 9.8e-76 287.3 221 63.3
BcaB01g04838 Brassica carinata HOM05D004698 ORTHO05D005699 9.8e-76 287.3 221 62.9
Lalb_Chr06g0164501 Lupinus albus HOM05D004698 ORTHO05D005699 9.8e-76 287.3 214 65.4
Ah.06g193310 Amaranthus hybridus HOM05D004698 ORTHO05D005699 1.7e-75 286.6 220 63.6
ClCG03G013670 Citrullus lanatus HOM05D004698 ORTHO05D005699 2.2e-75 286.2 210 65.2
THA.LOC104811123 Tarenaya hassleriana HOM05D004698 ORTHO05D005699 2.2e-75 286.2 222 63.1
TAR633G2590 Trochodendron aralioides HOM05D004698 ORTHO05D005699 2.2e-75 286.2 221 62.0
Lj5g0001870 Lotus japonicus HOM05D004698 ORTHO05D005699 2.9e-75 285.8 220 65.0
Sed0023233 Sechium edule HOM05D004698 ORTHO05D005699 3.7e-75 285.4 221 62.0
Carub.0006s1798 Capsella rubella HOM05D004698 ORTHO05D005699 6.4e-75 284.6 221 60.6
SGA_v2.0_scaffold94G28426 Striga asiatica HOM05D004698 ORTHO05D005699 1.1e-74 283.9 221 59.7
Zm00001eb252760 Zea mays HOM05D004698 ORTHO05D005699 1.1e-74 283.9 227 62.6
AT5G19630 Arabidopsis thaliana HOM05D004698 ORTHO05D005699 1.4e-74 283.5 222 60.8
EL10Ac4g10324 Beta vulgaris HOM05D004698 ORTHO05D005699 1.9e-74 283.1 220 63.2
Os02g0717100 Oryza sativa ssp. japonica HOM05D004698 ORTHO05D005699 1.9e-74 283.1 224 62.5
Lju124A28T33 Lonicera japonica HOM05D004698 ORTHO05D005699 2.4e-74 282.7 224 63.8
Lalb_Chr02g0144411 Lupinus albus HOM05D004698 ORTHO05D005699 4.1e-74 282.0 215 64.2
PGR102G0099 Punica granatum HOM05D004698 ORTHO05D005699 4.1e-74 282.0 222 62.2
CDE10G0673 Ceratophyllum demersum HOM05D004698 ORTHO05D005699 5.4e-74 281.6 221 61.5
Lsat_1_v5_gn_9_26700 Lactuca sativa HOM05D004698 ORTHO05D005699 5.4e-74 281.6 222 61.3
Nitab4.5_0001146g0120 Nicotiana tabacum HOM05D004698 ORTHO05D005699 5.4e-74 281.6 222 62.2
Sp6g24760 Schrenkiella parvula HOM05D004698 ORTHO05D005699 5.4e-74 281.6 221 61.5
Gohir.A13G214800 Gossypium hirsutum HOM05D004698 ORTHO05D005699 7.0e-74 281.2 221 63.8
Nitab4.5_0013751g0010 Nicotiana tabacum HOM05D004698 ORTHO05D005699 7.0e-74 281.2 218 61.5
Gorai.013G249300 Gossypium raimondii HOM05D004698 ORTHO05D005699 9.2e-74 280.8 221 63.3
Medtr8g092560 Medicago truncatula HOM05D004698 ORTHO05D005699 1.2e-73 280.4 216 65.7
A03p09560 Brassica napus HOM05D004698 ORTHO05D005699 2.0e-73 279.6 221 62.0
BraA03t10273Z Brassica rapa HOM05D004698 ORTHO05D005699 2.0e-73 279.6 221 62.0
AUR62000051 Chenopodium quinoa HOM05D004698 ORTHO05D005699 2.0e-73 279.6 220 61.8
SalBow1G8278 Salvia bowleyana HOM05D004698 ORTHO05D005699 2.0e-73 279.6 223 61.0
Peaxi162Scf00403g00114 Petunia axillaris HOM05D004698 ORTHO05D005699 2.7e-73 279.3 210 62.9
Hund07554 Selenicereus undatus HOM05D004698 ORTHO05D005699 3.5e-73 278.9 221 63.3
CiPaw.13G168500 Carya illinoinensis HOM05D004698 ORTHO05D005699 4.6e-73 278.5 210 63.3
Potri.001G013700 Populus trichocarpa HOM05D004698 ORTHO05D005699 4.6e-73 278.5 221 60.6
PGSC0003DMG400032153 Solanum tuberosum HOM05D004698 ORTHO05D005699 4.6e-73 278.5 232 59.9
TPR.G32598 Trifolium pratense HOM05D004698 ORTHO05D005699 4.6e-73 278.5 215 62.3
CANSAT54G0070 Cannabis sativa HOM05D004698 ORTHO05D005699 7.8e-73 277.7 211 63.0
Manes.06G169600 Manihot esculenta HOM05D004698 ORTHO05D005699 7.8e-73 277.7 221 60.6
Peaxi162Scf00258g00313 Petunia axillaris HOM05D004698 ORTHO05D005699 1.7e-72 276.6 219 61.2
ECA247G2042 Erigeron canadensis HOM05D004698 ORTHO05D005699 3.0e-72 275.8 219 59.8
Sabra03G0155400 Salix brachista HOM05D004698 ORTHO05D005699 3.0e-72 275.8 221 60.6
Ca_11410_v3 Cicer arietinum L. HOM05D004698 ORTHO05D005699 5.0e-72 275.0 222 64.4
Sabra03G0158600 Salix brachista HOM05D004698 ORTHO05D005699 5.0e-72 275.0 221 60.6
Solyc01g006480.3 Solanum lycopersicum HOM05D004698 ORTHO05D005699 5.0e-72 275.0 232 59.5
Sopen01g002460 Solanum pennellii HOM05D004698 ORTHO05D005699 5.0e-72 275.0 232 59.5
Gohir.D05G069500 Gossypium hirsutum HOM05D004698 ORTHO05D005699 6.6e-72 274.6 221 61.5
HanXRQChr10g0300701 Helianthus annuus HOM05D004698 ORTHO05D005699 1.1e-71 273.9 222 60.4
BcaC03g13695 Brassica carinata HOM05D004698 ORTHO05D005699 1.5e-71 273.5 221 59.3
DCAR_003213 Daucus carota HOM05D004698 ORTHO05D005699 1.5e-71 273.5 220 60.9
Pp3c25_340 Physcomitrium patens HOM05D004698 ORTHO05D005699 2.5e-71 272.7 224 58.5
SEGI_09892 Sequoiadendron giganteum HOM05D004698 ORTHO05D005699 2.5e-71 272.7 220 61.8
Gorai.009G070500 Gossypium raimondii HOM05D004698 ORTHO05D005699 3.3e-71 272.3 221 61.1
MD11G1019500 Malus domestica HOM05D004698 ORTHO05D005699 4.3e-71 271.9 246 56.5
unitig_0.g767 Utricularia gibba HOM05D004698 ORTHO05D005699 4.3e-71 271.9 220 59.5
Potri.003G212400 Populus trichocarpa HOM05D004698 ORTHO05D005699 5.6e-71 271.6 221 59.7
Potri.T056064 Populus trichocarpa HOM05D004698 ORTHO05D005699 5.6e-71 271.6 221 59.7
Gohir.A05G066748 Gossypium hirsutum HOM05D004698 ORTHO05D005699 1.2e-70 270.4 221 61.1
AUR62019223 Chenopodium quinoa HOM05D004698 ORTHO05D005699 2.8e-70 269.2 220 60.5
Lj2C370G0 Lonicera japonica HOM05D004698 ORTHO05D005699 1.1e-69 267.3 228 58.8
PGSC0003DMG400033344 Solanum tuberosum HOM05D004698 ORTHO05D005699 2.3e-69 266.2 219 58.9
Nitab4.5_0000324g0230 Nicotiana tabacum HOM05D004698 ORTHO05D005699 6.8e-69 264.6 219 58.4
AagrBONN_evm.TU.Sc2ySwM_228.4678 Anthoceros agrestis HOM05D004698 ORTHO05D005699 8.9e-69 264.2 223 57.0
Nitab4.5_0003890g0030 Nicotiana tabacum HOM05D004698 ORTHO05D005699 2.0e-68 263.1 219 58.4
Solyc03g063290.3 Solanum lycopersicum HOM05D004698 ORTHO05D005699 2.9e-67 259.2 219 58.4
Sopen03g015850 Solanum pennellii HOM05D004698 ORTHO05D005699 3.7e-67 258.8 219 58.4
CAN.G364.5 Capsicum annuum HOM05D004698 ORTHO05D005699 4.9e-67 258.5 219 56.2
Mapoly0046s0043 Marchantia polymorpha HOM05D004698 ORTHO05D005699 4.9e-67 258.5 223 56.1
Pp3c7_25270 Physcomitrium patens HOM05D004698 ORTHO05D005699 4.9e-67 258.5 211 58.8
Psat6g242840 Pisum sativum HOM05D004698 ORTHO05D005699 2.4e-66 256.1 222 59.9
SMO117G0218 Selaginella moellendorffii HOM05D004698 ORTHO05D005699 1.2e-65 253.8 212 57.1
COL.COLO4_10392 Corchorus olitorius HOM05D004698 ORTHO05D005699 2.1e-65 253.1 322 45.0
vmacro07926 Vaccinium macrocarpon HOM05D004698 ORTHO05D005699 1.0e-64 250.8 308 46.1
Psat2g056640 Pisum sativum HOM05D004698 ORTHO05D005699 6.6e-64 248.1 222 58.6
SHI30529 Sapria himalayana HOM05D004698 ORTHO05D005699 5.2e-61 238.4 223 54.7
BcaB05g23400 Brassica carinata HOM05D004698 ORTHO05D005699 8.9e-61 237.7 221 53.8
Sabra01G0010100 Salix brachista HOM05D004698 ORTHO05D005699 1.2e-57 227.3 353 38.2
MBI01_g33892_MAGBIO Magnolia biondii HOM05D004698 ORTHO05D005699 2.7e-57 226.1 175 64.0
GSVIVG01025354001 Vitis vinifera HOM05D004698 ORTHO05D005699 4.7e-54 215.3 152 66.4
SalBow1G8507 Salvia bowleyana HOM05D004698 ORTHO05D005699 2.4e-53 213.0 176 59.7
BNapus_Darmor_BZH_scaffold_38p02250 Brassica napus HOM05D004698 ORTHO05D005699 5.2e-53 211.8 151 65.6
Cc06_g16050 Coffea canephora HOM05D004698 ORTHO05D005699 5.2e-53 211.8 152 65.1
HPP92_022782 Vanilla planifolia HOM05D004698 ORTHO05D005699 2.7e-49 199.5 166 60.8
BolC2t06975H Brassica oleracea HOM05D004698 ORTHO05D005699 3.5e-49 199.1 151 62.3
Dinv36316 Davidia involucrata HOM05D004698 ORTHO05D005699 5.3e-45 185.3 139 63.3
Cc01_g03800 Coffea canephora HOM05D004698 ORTHO05D005699 2.0e-44 183.3 130 70.0
TAR636G0496 Trochodendron aralioides HOM05D004698 ORTHO05D005699 5.8e-44 181.8 123 68.3
Glyma.18G020100 Glycine max HOM05D004698 ORTHO05D005699 2.1e-41 173.3 198 48.0
CSS0002150 Camellia sinensis var. sinensis HOM05D004698 ORTHO05D005699 3.9e-40 169.1 108 71.3
A02p05700 Brassica napus HOM05D004698 ORTHO05D005699 4.5e-36 155.6 110 65.5
BraA02t05522Z Brassica rapa HOM05D004698 ORTHO05D005699 4.5e-36 155.6 110 65.5
Haze_23028 Corylus avellana HOM05D004698 ORTHO05D005699 9.9e-36 154.5 221 41.2
PRCOL_00006777 Prasinoderma coloniale HOM05D004698 ORTHO05D005699 5.5e-34 148.7 199 40.2
Cpa.g.sc117.1 Carica papaya HOM05D004698 ORTHO05D005699 2.7e-33 146.4 99 66.7
Manes.10G126700 Manihot esculenta HOM05D004698 ORTHO05D005699 5.1e-32 142.1 115 60.9
Nn7g36023 Nelumbo nucifera HOM05D004698 ORTHO05D005699 1.5e-31 140.6 116 59.5
Eucgr.L01569 Eucalyptus grandis HOM05D004698 ORTHO05D005699 6.2e-30 135.2 116 56.0
MD03G1017600 Malus domestica HOM05D004698 ORTHO05D005699 8.1e-30 134.8 95 63.2
Duzib170G0131 Durio zibethinus HOM05D004698 ORTHO05D005699 1.1e-29 134.4 116 60.3
RcHm_v2.0_Chr5g0080421 Rosa chinensis HOM05D004698 ORTHO05D005699 7.1e-26 121.7 80 72.5
MD03G1115900 Malus domestica HOM05D004698 ORTHO05D005699 2.3e-24 116.7 141 47.5
Ca_11408_v3 Cicer arietinum L. HOM05D004119 ORTHO05D004797 5.9e-20 102.1 106 53.8
Dinv15836 Davidia involucrata HOM05D004698 ORTHO05D005699 1.0e-19 101.3 81 60.5
MCO08G354 Micromonas commoda HOM05D004698 ORTHO05D005699 1.2e-17 94.4 201 30.3
Potri.006G191700 Populus trichocarpa HOM05D004698 ORTHO05D005699 1.0e-16 91.3 78 60.3
Sabra16G0026900 Salix brachista HOM05D004698 ORTHO05D005699 1.0e-16 91.3 126 45.2
RcHm_v2.0_Chr1g0343461 Rosa chinensis HOM05D004698 ORTHO05D005699 1.6e-14 84.0 57 73.7
MD03G1017500 Malus domestica HOM05D004698 ORTHO05D005699 1.3e-11 74.3 47 76.6
MD13G1112600 Malus domestica HOM05D000829 ORTHO05D000690 5.7e-07 58.9 48 60.4


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