Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G044100 Manihot esculenta HOM05D014635 ORTHO05D014310 2.3e-126 455.7 247 100.0
Sabra16G0062200 Salix brachista HOM05D014635 ORTHO05D014310 2.5e-19 100.1 241 33.6
Potri.016G059400 Populus trichocarpa HOM05D014635 ORTHO05D014310 3.5e-18 96.3 231 34.2
QL07p024385 Quercus lobata HOM05D046221 ORTHO05D014310 1.0e-12 78.2 207 34.8
Gohir.D01G179100 Gossypium hirsutum HOM05D014635 ORTHO05D014310 3.8e-12 76.3 193 32.6
COL.COLO4_29345 Corchorus olitorius HOM05D014635 ORTHO05D014310 1.1e-11 74.7 160 35.0
Duzib093G0164 Durio zibethinus HOM05D014635 ORTHO05D014310 1.2e-10 71.2 133 35.3
Actinidia22048 Actinidia chinensis HOM05D003648 ORTHO05D014310 1.6e-10 70.9 287 28.6
Gorai.002G223700 Gossypium raimondii HOM05D014635 ORTHO05D014310 1.1e-08 64.7 105 39.0
TAR623G0235 Trochodendron aralioides HOM05D003648 ORTHO05D004267 1.9e-08 63.9 182 33.0
Gohir.A01G137604 Gossypium hirsutum HOM05D003648 ORTHO05D004267 3.3e-08 63.2 122 39.3
Gohir.A01G190633 Gossypium hirsutum HOM05D014635 ORTHO05D014310 4.3e-08 62.8 171 32.2
Gohir.D01G125600 Gossypium hirsutum HOM05D003648 ORTHO05D004267 5.7e-08 62.4 104 43.3
Gorai.002G156300 Gossypium raimondii HOM05D003648 ORTHO05D004267 5.7e-08 62.4 104 43.3
Dinv16371 Davidia involucrata HOM05D003648 ORTHO05D004267 9.7e-08 61.6 238 27.3
RcHm_v2.0_Chr3g0479411 Rosa chinensis HOM05D003648 ORTHO05D004267 1.3e-07 61.2 209 29.2
Thecc.05G174100 Theobroma cacao HOM05D014635 ORTHO05D014310 1.3e-07 61.2 144 36.1
Duzib093G1879 Durio zibethinus HOM05D003648 ORTHO05D004267 2.8e-07 60.1 163 31.9
FAN05G4067 Fragaria x ananassa HOM05D003648 ORTHO05D004267 2.8e-07 60.1 199 31.2
QL07p024250 Quercus lobata HOM05D046221 ORTHO05D014310 2.8e-07 60.1 186 32.8
TAR369G0578 Trochodendron aralioides HOM05D003648 ORTHO05D004267 2.8e-07 60.1 207 29.5
MBI19_g03064_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 3.7e-07 59.7 153 32.0
Manes.08G043500 Manihot esculenta HOM05D003648 ORTHO05D004267 3.7e-07 59.7 159 32.1
Medtr7g093360 Medicago truncatula HOM05D003648 ORTHO05D004267 3.7e-07 59.7 161 32.3
FAN02G2154 Fragaria x ananassa HOM05D003648 ORTHO05D004267 1.8e-06 57.4 187 31.0
FAN14G0601 Fragaria x ananassa HOM05D003648 ORTHO05D004267 1.8e-06 57.4 209 29.2
Lj1g0001044 Lotus japonicus HOM05D003648 ORTHO05D004267 1.8e-06 57.4 174 27.0
FvH4_6g22070 Fragaria vesca HOM05D003648 ORTHO05D004267 3.1e-06 56.6 210 29.0
Sabra16G0061500 Salix brachista HOM05D003648 ORTHO05D004267 3.1e-06 56.6 158 32.3
CiPaw.09G029700 Carya illinoinensis HOM05D003648 ORTHO05D004267 4.1e-06 56.2 185 29.7
ATR0598G173 Amborella trichopoda HOM05D003648 ORTHO05D004267 5.3e-06 55.8 151 30.5
FAN09G0401 Fragaria x ananassa HOM05D003648 ORTHO05D004267 5.3e-06 55.8 199 30.2
Medtr1g054175 Medicago truncatula HOM05D003648 ORTHO05D004267 5.3e-06 55.8 182 31.3
Thecc.05G173300 Theobroma cacao HOM05D003648 ORTHO05D004267 5.3e-06 55.8 176 32.4
THA.LOC104824476 Tarenaya hassleriana HOM05D003648 ORTHO05D004267 6.9e-06 55.5 36 61.1
Psat3g068040 Pisum sativum HOM05D003648 ORTHO05D004267 9.0e-06 55.1 121 33.9


User provided reference genes

Program Settings