Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G043500 Manihot esculenta HOM05D003648 ORTHO05D004267 1.7e-177 625.9 323 100.0
Manes.09G036200 Manihot esculenta HOM05D003648 ORTHO05D004267 4.1e-99 365.5 345 66.4
Potri.006G193500 Populus trichocarpa HOM05D003648 ORTHO05D004267 1.3e-81 307.4 356 56.7
Potri.016G058100 Populus trichocarpa HOM05D003648 ORTHO05D004267 2.3e-81 306.6 348 58.0
Potri.006G193300 Populus trichocarpa HOM05D003648 ORTHO05D004267 5.2e-78 295.4 352 56.8
Sabra16G0061500 Salix brachista HOM05D003648 ORTHO05D004267 2.6e-77 293.1 344 57.6
Sabra16G0061400 Salix brachista HOM05D003648 ORTHO05D004267 1.8e-75 287.0 344 56.4
Sabra06G0148400 Salix brachista HOM05D003648 ORTHO05D004267 5.4e-75 285.4 357 55.7
Manes.08G043600 Manihot esculenta HOM05D003648 ORTHO05D004267 5.0e-73 278.9 341 54.5
CiPaw.09G029700 Carya illinoinensis HOM05D003648 ORTHO05D004267 2.5e-72 276.6 362 52.8
QL07p024078 Quercus lobata HOM05D003648 ORTHO05D004267 6.8e-70 268.5 375 50.7
Potri.016G058000 Populus trichocarpa HOM05D003648 ORTHO05D004267 9.8e-69 264.6 345 54.5
Cfa020157 Carpinus fangiana HOM05D003648 ORTHO05D004267 4.1e-67 259.2 361 52.4
Haze_20003 Corylus avellana HOM05D003648 ORTHO05D004267 2.3e-65 253.4 367 49.3
CiPaw.10G026000 Carya illinoinensis HOM05D003648 ORTHO05D004267 8.6e-65 251.5 373 49.1
Thecc.05G173300 Theobroma cacao HOM05D003648 ORTHO05D004267 3.1e-62 243.0 378 47.9
Sabra06G0148600 Salix brachista HOM05D003648 ORTHO05D004267 2.6e-61 240.0 344 51.5
Haze_20001 Corylus avellana HOM05D003648 ORTHO05D004267 4.1e-59 232.6 389 45.8
Duzib093G1879 Durio zibethinus HOM05D003648 ORTHO05D004267 3.6e-55 219.5 380 45.0
TPR.G18228 Trifolium pratense HOM05D003648 ORTHO05D004267 1.4e-54 217.6 356 46.6
Atru.chr8.1128 Acer truncatum HOM05D003648 ORTHO05D004267 1.8e-54 217.2 358 47.2
Medtr1g054175 Medicago truncatula HOM05D003648 ORTHO05D004267 2.0e-53 213.8 314 48.7
Duzib128G0816 Durio zibethinus HOM05D003648 ORTHO05D004267 5.8e-53 212.2 391 43.7
RcHm_v2.0_Chr3g0479411 Rosa chinensis HOM05D003648 ORTHO05D004267 3.8e-52 209.5 378 44.4
FAN02G2154 Fragaria x ananassa HOM05D003648 ORTHO05D004267 4.9e-52 209.1 379 45.4
Prupe.7G079000 Prunus persica HOM05D003648 ORTHO05D004267 6.4e-52 208.8 408 43.6
FvH4_6g22070 Fragaria vesca HOM05D003648 ORTHO05D004267 2.4e-51 206.8 384 46.9
FAN14G0601 Fragaria x ananassa HOM05D003648 ORTHO05D004267 2.4e-51 206.8 382 46.6
Gohir.A01G137604 Gossypium hirsutum HOM05D003648 ORTHO05D004267 5.4e-51 205.7 329 45.6
FAN05G4067 Fragaria x ananassa HOM05D003648 ORTHO05D004267 1.6e-50 204.1 387 45.2
MD14G1055800 Malus domestica HOM05D003648 ORTHO05D004267 2.1e-50 203.8 401 43.4
TWI77G0250 Tripterygium wilfordii HOM05D003648 ORTHO05D004267 2.1e-50 203.8 345 45.8
VMungo0720G1699 Vigna mungo HOM05D003648 ORTHO05D004267 2.7e-50 203.4 378 43.4
Lj1g0001044 Lotus japonicus HOM05D003648 ORTHO05D004267 4.6e-50 202.6 356 44.1
Glyma.09G110100 Glycine max HOM05D003648 ORTHO05D004267 7.8e-50 201.8 377 43.8
FAN09G0401 Fragaria x ananassa HOM05D003648 ORTHO05D004267 1.3e-49 201.1 376 43.9
Glyma.03G145500 Glycine max HOM05D003648 ORTHO05D004267 3.9e-49 199.5 375 46.1
Cpa.g.sc85.54 Carica papaya HOM05D003648 ORTHO05D004267 1.9e-48 197.2 381 44.9
Ciclev10012160m.g Citrus clementina HOM05D003648 ORTHO05D004267 7.3e-48 195.3 355 42.5
TWI53G1880 Tripterygium wilfordii HOM05D003648 ORTHO05D004267 9.6e-48 194.9 341 46.0
Gohir.A04G053800 Gossypium hirsutum HOM05D003648 ORTHO05D004267 1.6e-47 194.1 363 43.0
COL.COLO4_29331 Corchorus olitorius HOM05D003648 ORTHO05D004267 2.1e-47 193.7 394 40.9
Dinv14314 Davidia involucrata HOM05D003648 ORTHO05D004267 2.1e-47 193.7 279 50.9
Hma1.2p1_0431F.1_g151600 Hydrangea macrophylla HOM05D003648 ORTHO05D004267 3.6e-47 193.0 351 46.2
CSS0001516 Camellia sinensis var. sinensis HOM05D003648 ORTHO05D004267 6.2e-47 192.2 334 43.7
TPR.G15988 Trifolium pratense HOM05D003648 ORTHO05D004267 6.2e-47 192.2 254 50.4
Glyma.19G148700 Glycine max HOM05D003648 ORTHO05D004267 8.1e-47 191.8 386 44.0
Medtr7g093360 Medicago truncatula HOM05D003648 ORTHO05D004267 1.4e-46 191.0 357 44.5
Gohir.D04G089900 Gossypium hirsutum HOM05D003648 ORTHO05D004267 3.1e-46 189.9 363 42.4
MD12G1056100 Malus domestica HOM05D003648 ORTHO05D004267 6.9e-46 188.7 406 41.9
Gorai.002G156300 Gossypium raimondii HOM05D003648 ORTHO05D004267 2.6e-45 186.8 324 42.6
Glyma.02G171900 Glycine max HOM05D003648 ORTHO05D004267 3.4e-45 186.4 372 43.3
Lalb_Chr18g0047911 Lupinus albus HOM05D003648 ORTHO05D004267 3.4e-45 186.4 369 41.5
Lalb_Chr18g0047921 Lupinus albus HOM05D003648 ORTHO05D004267 9.9e-45 184.9 370 41.1
Gohir.D01G125600 Gossypium hirsutum HOM05D003648 ORTHO05D004267 2.2e-44 183.7 325 42.5
Phvul.007G260600 Phaseolus vulgaris HOM05D003648 ORTHO05D004267 2.2e-44 183.7 370 43.0
Nn2g15698 Nelumbo nucifera HOM05D003648 ORTHO05D004267 3.8e-44 183.0 332 41.3
Peaxi162Scf00480g00036 Petunia axillaris HOM05D003648 ORTHO05D004267 4.9e-44 182.6 337 42.7
Eucgr.A02456 Eucalyptus grandis HOM05D003648 ORTHO05D004267 3.2e-43 179.9 359 40.7
Medtr7g093350 Medicago truncatula HOM05D003648 ORTHO05D004267 2.7e-42 176.8 358 43.3
MELO3C009616.2 Cucumis melo HOM05D003648 ORTHO05D004267 7.8e-42 175.3 205 54.6
CsaV3_3G038720 Cucumis sativus L. HOM05D003648 ORTHO05D004267 7.8e-42 175.3 254 50.0
Actinidia32398 Actinidia chinensis HOM05D003648 ORTHO05D004267 1.5e-40 171.0 337 42.7
Nitab4.5_0003600g0010 Nicotiana tabacum HOM05D003648 ORTHO05D004267 1.9e-40 170.6 333 40.5
VMungo1383G3335 Vigna mungo HOM05D003648 ORTHO05D004267 1.9e-40 170.6 364 41.8
Sed0001893 Sechium edule HOM05D003648 ORTHO05D004267 2.5e-40 170.2 215 52.6
TAR369G0578 Trochodendron aralioides HOM05D003648 ORTHO05D004267 5.6e-40 169.1 280 46.8
DCAR_013539 Daucus carota HOM05D003648 ORTHO05D004267 7.3e-40 168.7 374 38.2
Nitab4.5_0006890g0010 Nicotiana tabacum HOM05D003648 ORTHO05D004267 1.6e-39 167.5 323 39.9
Phvul.001G143000 Phaseolus vulgaris HOM05D003648 ORTHO05D004267 2.1e-39 167.2 382 41.1
Actinidia22042 Actinidia chinensis HOM05D003648 ORTHO05D004267 3.6e-39 166.4 305 43.3
TAR633G0715 Trochodendron aralioides HOM05D003648 ORTHO05D004267 6.2e-39 165.6 368 38.9
Lj5g0018704 Lotus japonicus HOM05D003648 ORTHO05D004267 6.9e-38 162.2 351 41.6
Gohir.1Z049549 Gossypium hirsutum HOM05D003648 ORTHO05D004267 1.3e-36 157.9 194 56.2
arahy.Tifrunner.gnm1.ann1.SE7UXR Arachis hypogaea HOM05D003648 ORTHO05D004267 4.9e-36 156.0 413 35.6
Actinidia22043 Actinidia chinensis HOM05D003648 ORTHO05D004267 2.7e-34 150.2 353 38.5
Oeu007752.1 Olea europaea HOM05D003648 ORTHO05D004267 4.6e-34 149.4 320 38.8
Psat3g068040 Pisum sativum HOM05D003648 ORTHO05D004267 6.0e-34 149.1 282 45.0
Gorai.012G100300 Gossypium raimondii HOM05D003648 ORTHO05D004267 7.9e-34 148.7 238 46.2
arahy.Tifrunner.gnm1.ann1.D8BKSU Arachis hypogaea HOM05D003648 ORTHO05D004267 1.0e-33 148.3 349 38.4
Cc06_g15770 Coffea canephora HOM05D003648 ORTHO05D004267 1.3e-33 147.9 176 54.0
MSTRG.19911 Avicennia marina HOM05D003648 ORTHO05D004267 2.3e-33 147.1 324 39.5
arahy.Tifrunner.gnm1.ann1.AL1Y46 Arachis hypogaea HOM05D003648 ORTHO05D004267 3.0e-33 146.7 409 34.5
arahy.Tifrunner.gnm1.ann1.DZ4RFW Arachis hypogaea HOM05D003648 ORTHO05D004267 3.9e-33 146.4 337 37.4
Rhsim03G0005500 Rhododendron simsii HOM05D003648 ORTHO05D004267 3.9e-33 146.4 333 36.9
CANSAT64G1307 Cannabis sativa HOM05D003648 ORTHO05D004267 8.7e-33 145.2 435 34.7
Nn7g35986 Nelumbo nucifera HOM05D003648 ORTHO05D004267 1.1e-32 144.8 343 37.0
Nn7g35998 Nelumbo nucifera HOM05D003648 ORTHO05D004267 1.9e-32 144.1 305 40.0
PGSC0003DMG400023669 Solanum tuberosum HOM05D003648 ORTHO05D004267 2.5e-32 143.7 337 36.2
Lsat_1_v5_gn_9_26100 Lactuca sativa HOM05D003648 ORTHO05D004267 3.7e-31 139.8 356 36.5
Dinv24064 Davidia involucrata HOM05D003648 ORTHO05D004267 6.2e-31 139.0 282 41.1
CAN.G128.46 Capsicum annuum HOM05D003648 ORTHO05D004267 1.1e-30 138.3 288 37.8
Psat0s5171g0040 Pisum sativum HOM05D003648 ORTHO05D004267 1.1e-30 138.3 267 46.8
DCAR_017003 Daucus carota HOM05D003648 ORTHO05D004267 1.8e-30 137.5 363 35.0
Solyc10g080530.2 Solanum lycopersicum HOM05D003648 ORTHO05D004267 2.4e-30 137.1 341 37.0
THA.LOC104802623 Tarenaya hassleriana HOM05D003648 ORTHO05D004267 4.0e-30 136.3 327 37.0
MSTRG.6486 Avicennia marina HOM05D003648 ORTHO05D004267 1.7e-28 131.0 321 39.9
ClCG10G017600 Citrullus lanatus HOM05D003648 ORTHO05D004267 2.2e-28 130.6 118 60.2
Dinv16371 Davidia involucrata HOM05D003648 ORTHO05D004267 4.9e-28 129.4 193 44.6
GSVIVG01033479001 Vitis vinifera HOM05D003648 ORTHO05D004267 8.4e-28 128.6 317 38.8
CAN.G128.47 Capsicum annuum HOM05D003648 ORTHO05D004267 1.9e-27 127.5 340 35.3
Hund19206 Selenicereus undatus HOM05D003648 ORTHO05D004267 5.5e-27 125.9 335 37.0
TAR623G0235 Trochodendron aralioides HOM05D003648 ORTHO05D004267 5.5e-27 125.9 202 46.0
vmacro07898 Vaccinium macrocarpon HOM05D003648 ORTHO05D004267 9.3e-27 125.2 122 57.4
Nn2g15714 Nelumbo nucifera HOM05D003648 ORTHO05D004267 7.9e-26 122.1 289 36.0
EL10Ac3g06898 Beta vulgaris HOM05D003648 ORTHO05D004267 1.3e-25 121.3 342 36.8
PGR004G0238 Punica granatum HOM05D003648 ORTHO05D004267 3.0e-25 120.2 336 36.6
C03p28080 Brassica napus HOM05D003648 ORTHO05D004267 5.6e-24 115.9 324 34.9
CARHR137130 Cardamine hirsuta HOM05D003648 ORTHO05D004267 9.6e-24 115.2 331 33.8
GSVIVG01033486001 Vitis vinifera HOM05D003648 ORTHO05D004267 9.6e-24 115.2 117 58.1
Oeu039811.1 Olea europaea HOM05D003648 ORTHO05D004267 1.3e-23 114.8 153 47.1
THA.LOC104824476 Tarenaya hassleriana HOM05D003648 ORTHO05D004267 1.3e-23 114.8 316 36.4
BolC3t15177H Brassica oleracea HOM05D003648 ORTHO05D004267 3.7e-23 113.2 128 51.6
BraA03t11571Z Brassica rapa HOM05D003648 ORTHO05D004267 3.7e-23 113.2 324 35.8
AL4G40410 Arabidopsis lyrata HOM05D003648 ORTHO05D004267 1.4e-22 111.3 315 35.9
AT2G42040 Arabidopsis thaliana HOM05D003648 ORTHO05D004267 4.0e-22 109.8 319 35.4
Ah.04g152510 Amaranthus hybridus HOM05D003648 ORTHO05D004267 5.3e-22 109.4 332 33.1
HanXRQChr10g0289891 Helianthus annuus HOM05D003648 ORTHO05D004267 5.3e-22 109.4 248 35.9
MBI19_g23209_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 5.3e-22 109.4 125 51.2
MBI19_g03064_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 6.9e-22 109.0 174 42.5
Migut.J01846 Erythranthe guttata HOM05D003648 ORTHO05D004267 1.2e-21 108.2 151 47.0
A03p23540 Brassica napus HOM05D003648 ORTHO05D004267 2.0e-21 107.5 324 34.6
Thhalv10017052m.g Eutrema salsugineum HOM05D003648 ORTHO05D004267 2.0e-21 107.5 319 35.1
BcaB01g03435 Brassica carinata HOM05D003648 ORTHO05D004267 2.6e-21 107.1 320 34.4
Aqoxy2G00100 Aquilegia oxysepala HOM05D003648 ORTHO05D004267 5.8e-21 105.9 291 33.0
CDE06G0452 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 7.6e-21 105.5 207 42.0
MBI13_g32435_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 1.0e-20 105.1 63 76.2
SpUn1032_0010 Schrenkiella parvula HOM05D003648 ORTHO05D004267 1.3e-20 104.8 111 56.8
Carub.0004s2437 Capsella rubella HOM05D003648 ORTHO05D004267 2.9e-20 103.6 316 33.5
BcaC01g05312 Brassica carinata HOM05D003648 ORTHO05D004267 4.9e-20 102.8 320 34.4
CDE05G0371 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 1.4e-19 101.3 201 38.8
CDE04G2150 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 1.9e-19 100.9 207 39.6
Ah.13g075770 Amaranthus hybridus HOM05D003648 ORTHO05D004267 3.2e-19 100.1 129 50.4
C04p69480 Brassica napus HOM05D003648 ORTHO05D004267 7.1e-19 99.0 116 52.6
SalBow6G7267 Salvia bowleyana HOM05D003648 ORTHO05D004267 9.3e-19 98.6 196 41.8
BcaC02g07267 Brassica carinata HOM05D003648 ORTHO05D004267 3.5e-18 96.7 113 52.2
BraA05t19262Z Brassica rapa HOM05D003648 ORTHO05D004267 3.5e-18 96.7 320 34.1
Aa31LG1G24140 Aethionema arabicum HOM05D003648 ORTHO05D004267 4.6e-18 96.3 316 32.6
A05p02700 Brassica napus HOM05D003648 ORTHO05D004267 7.9e-18 95.5 320 33.8
BcaC02g12455 Brassica carinata HOM05D003648 ORTHO05D004267 1.8e-17 94.4 320 33.4
C04p03220 Brassica napus HOM05D003648 ORTHO05D004267 1.8e-17 94.4 320 33.4
BolC4t21960H Brassica oleracea HOM05D003648 ORTHO05D004267 1.8e-17 94.4 320 33.4
AUR62015354 Chenopodium quinoa HOM05D003648 ORTHO05D004267 3.0e-17 93.6 114 53.5
MBI19_g43859_MAGBIO Magnolia biondii HOM05D003648 ORTHO05D004267 6.7e-17 92.4 161 41.0
BraA04t18655Z Brassica rapa HOM05D003648 ORTHO05D004267 1.1e-16 91.7 119 46.2
A04p31970 Brassica napus HOM05D003648 ORTHO05D004267 4.3e-16 89.7 113 46.9
HPP92_016181 Vanilla planifolia HOM05D003648 ORTHO05D004267 7.4e-16 89.0 113 46.0
HPP92_026735 Vanilla planifolia HOM05D003648 ORTHO05D004267 7.4e-16 89.0 113 46.0
ATR0598G173 Amborella trichopoda HOM05D003648 ORTHO05D004267 9.7e-16 88.6 190 34.2
BolC4t28447H Brassica oleracea HOM05D003648 ORTHO05D004267 9.7e-16 88.6 328 31.7
CDE11G0439 Ceratophyllum demersum HOM05D003648 ORTHO05D004267 9.7e-16 88.6 52 75.0
ECA247G1467 Erigeron canadensis HOM05D003648 ORTHO05D004267 1.6e-15 87.8 152 44.1
Actinidia22048 Actinidia chinensis HOM05D003648 ORTHO05D014310 8.2e-15 85.5 188 37.2
Os02g0773600 Oryza sativa ssp. japonica HOM05D003648 ORTHO05D004267 8.2e-15 85.5 49 83.7
BcaB06g29223 Brassica carinata HOM05D003648 ORTHO05D004267 1.1e-14 85.1 111 48.6
Os06g0207600 Oryza sativa ssp. japonica HOM05D003648 ORTHO05D004267 3.1e-14 83.6 54 72.2
Nn7g36026 Nelumbo nucifera HOM05D003648 ORTHO05D004267 1.7e-12 77.8 103 46.6
Rhsim03G0005000 Rhododendron simsii HOM05D003648 ORTHO05D014310 5.5e-11 72.8 191 32.5
Zm00001eb193290 Zea mays HOM05D003648 ORTHO05D004267 5.5e-11 72.8 95 46.3
Dinv36431 Davidia involucrata HOM05D003648 ORTHO05D004267 1.8e-09 67.8 87 47.1
SEGI_34260 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 1.8e-09 67.8 110 40.0
SEGI_22789 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 3.9e-09 66.6 97 46.4
Sabra16G0062200 Salix brachista HOM05D014635 ORTHO05D014310 5.1e-09 66.2 142 34.5
QL07p024250 Quercus lobata HOM05D046221 ORTHO05D014310 6.7e-09 65.9 179 34.1
SEGI_21966 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 8.8e-09 65.5 258 29.8
Manes.08G044100 Manihot esculenta HOM05D014635 ORTHO05D014310 1.5e-08 64.7 159 32.1
Potri.016G059400 Populus trichocarpa HOM05D014635 ORTHO05D014310 4.3e-08 63.2 156 34.0
SEGI_09004 Sequoiadendron giganteum HOM05D003648 ORTHO05D004267 2.8e-07 60.5 168 34.5
QL07p024385 Quercus lobata HOM05D046221 ORTHO05D014310 6.3e-07 59.3 294 27.9
AUR62012019 Chenopodium quinoa HOM05D003648 ORTHO05D004267 1.1e-06 58.5 356 29.2
Duzib093G0164 Durio zibethinus HOM05D014635 ORTHO05D014310 1.8e-06 57.8 152 30.9
Thecc.05G174100 Theobroma cacao HOM05D014635 ORTHO05D014310 2.4e-06 57.4 301 27.6


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