Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 1.8e-99 365.9 184 100.0
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 1.8e-59 233.0 181 68.5
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 4.2e-56 221.9 181 67.4
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 6.0e-55 218.0 171 69.6
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 1.3e-54 216.9 175 69.1
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 2.3e-54 216.1 183 65.0
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 1.9e-53 213.0 171 66.1
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 5.6e-53 211.5 177 68.9
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 1.3e-52 210.3 163 68.7
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 1.6e-52 209.9 170 67.6
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 1.6e-52 209.9 163 68.7
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 2.1e-52 209.5 183 61.2
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 2.1e-52 209.5 170 66.5
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 2.8e-52 209.1 177 66.7
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 4.8e-52 208.4 163 68.7
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 2.4e-51 206.1 175 66.3
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 4.0e-51 205.3 176 65.3
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 5.3e-51 204.9 170 68.2
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 9.0e-51 204.1 170 66.5
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 9.0e-51 204.1 170 66.5
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 1.2e-50 203.8 149 66.4
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 2.6e-50 202.6 175 66.3
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 3.4e-50 202.2 143 73.4
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 3.4e-50 202.2 176 62.5
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 4.5e-50 201.8 143 73.4
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 1.3e-49 200.3 186 59.1
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 2.2e-49 199.5 172 64.5
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 2.2e-49 199.5 176 63.1
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 2.2e-49 199.5 171 62.0
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 2.9e-49 199.1 149 65.1
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 3.8e-49 198.7 174 62.6
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 4.9e-49 198.4 157 61.8
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 4.9e-49 198.4 173 64.7
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 4.9e-49 198.4 184 58.2
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 6.4e-49 198.0 114 82.5
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 1.4e-48 196.8 171 62.6
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 1.4e-48 196.8 171 64.9
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 2.4e-48 196.1 183 57.9
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 3.2e-48 195.7 116 80.2
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 5.4e-48 194.9 170 63.5
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 5.4e-48 194.9 106 85.8
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 5.4e-48 194.9 119 79.8
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 5.4e-48 194.9 117 81.2
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 9.3e-48 194.1 187 59.4
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 1.2e-47 193.7 121 76.0
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.2e-47 193.7 174 64.4
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 1.2e-47 193.7 171 62.0
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 1.2e-47 193.7 117 81.2
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 1.2e-47 193.7 120 77.5
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 2.1e-47 193.0 121 74.4
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 2.1e-47 193.0 121 74.4
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 2.1e-47 193.0 121 74.4
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 2.1e-47 193.0 183 56.8
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 2.1e-47 193.0 102 87.3
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 2.1e-47 193.0 195 55.9
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 2.1e-47 193.0 170 59.4
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 3.5e-47 192.2 171 62.0
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 4.6e-47 191.8 102 86.3
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 4.6e-47 191.8 136 68.4
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 6.0e-47 191.4 143 69.9
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 7.9e-47 191.0 174 64.4
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 1.0e-46 190.7 183 58.5
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 1.0e-46 190.7 98 90.8
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 1.3e-46 190.3 146 63.7
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 1.3e-46 190.3 146 65.8
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 1.8e-46 189.9 171 56.1
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.8e-46 189.9 174 63.2
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 3.0e-46 189.1 183 55.7
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 3.0e-46 189.1 161 60.2
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 3.0e-46 189.1 116 80.2
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 3.0e-46 189.1 116 80.2
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 5.1e-46 188.3 177 56.5
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 6.7e-46 188.0 98 88.8
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 6.7e-46 188.0 140 70.7
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 1.1e-45 187.2 185 55.7
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 2.5e-45 186.0 152 61.8
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 4.3e-45 185.3 137 68.6
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 4.3e-45 185.3 105 82.9
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 7.4e-45 184.5 115 78.3
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 7.4e-45 184.5 167 59.9
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 1.6e-44 183.3 174 58.0
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 2.1e-44 183.0 117 74.4
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 2.8e-44 182.6 116 73.3
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 2.8e-44 182.6 97 86.6
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 8.1e-44 181.0 174 58.6
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 1.1e-43 180.6 165 55.8
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 6.9e-43 177.9 98 86.7
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 1.5e-42 176.8 154 63.0
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 2.6e-42 176.0 103 76.7
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 3.8e-41 172.2 98 80.6
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 2.5e-40 169.5 136 61.0
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 7.1e-40 167.9 101 78.2
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 3.9e-38 162.2 110 65.5
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 7.4e-37 157.9 173 48.6
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 1.3e-36 157.1 100 71.0
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 3.1e-35 152.5 87 80.5
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 6.5e-33 144.8 171 52.6
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 2.1e-31 139.8 173 50.9
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 2.7e-31 139.4 179 48.0
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 4.6e-31 138.7 81 75.3
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 1.5e-29 133.7 114 64.9
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 1.9e-29 133.3 251 39.8
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 7.4e-29 131.3 71 78.9
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 9.7e-29 131.0 68 83.8
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 5.3e-27 125.2 66 80.3
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 2.6e-26 122.9 69 78.3
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 1.7e-25 120.2 166 45.2
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 4.6e-23 112.1 127 52.0
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 2.0e-18 96.7 92 52.2
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 6.5e-17 91.7 96 53.1
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 2.0e-13 80.1 41 80.5
SHI31775 Sapria himalayana HOM05D000002 ORTHO05D000001 9.7e-13 77.8 79 58.2


User provided reference genes

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