Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 2.9e-154 548.5 273 100.0
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 3.1e-100 369.0 277 70.0
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 5.9e-99 364.8 277 70.0
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 5.2e-95 351.7 272 68.8
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 1.5e-94 350.1 272 68.4
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 4.1e-92 342.0 272 66.5
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 5.0e-90 335.1 272 65.4
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 6.5e-90 334.7 277 63.2
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 1.1e-89 334.0 274 63.9
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 4.2e-89 332.0 277 63.9
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 9.4e-89 330.9 276 63.8
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 6.1e-88 328.2 277 64.3
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 1.5e-86 323.6 275 62.5
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 7.5e-86 321.2 277 60.6
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 2.2e-85 319.7 280 61.4
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 6.3e-85 318.2 280 62.5
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 1.1e-84 317.4 278 62.6
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 4.5e-83 312.0 275 61.5
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 5.9e-83 311.6 275 61.8
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 7.7e-83 311.2 280 60.0
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 7.7e-83 311.2 280 60.0
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 7.7e-83 311.2 277 59.2
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 1.3e-82 310.5 275 61.8
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 1.1e-81 307.4 277 61.4
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 3.3e-81 305.8 212 68.4
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 4.2e-81 305.4 280 59.3
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 9.5e-81 304.3 202 71.3
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 2.1e-80 303.1 273 59.3
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 4.7e-80 302.0 279 58.8
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 1.3e-77 293.9 274 60.6
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 1.3e-77 293.9 236 62.3
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 1.7e-77 293.5 276 57.6
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 2.8e-77 292.7 209 67.9
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 4.9e-77 292.0 202 69.3
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 1.8e-76 290.0 193 74.1
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 5.4e-76 288.5 245 62.0
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 5.4e-76 288.5 282 54.3
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 7.0e-76 288.1 255 56.1
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 9.2e-76 287.7 275 54.9
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 1.6e-75 287.0 231 61.5
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 2.7e-75 286.2 235 63.0
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 3.5e-75 285.8 214 64.0
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 1.0e-74 284.3 225 62.2
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 1.0e-74 284.3 274 56.6
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.7e-74 283.5 245 60.8
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 2.9e-74 282.7 273 53.8
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 1.9e-73 280.0 280 55.7
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 4.3e-73 278.9 261 55.2
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 1.6e-72 276.9 273 56.0
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 1.6e-72 276.9 269 56.5
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 2.1e-72 276.6 218 61.5
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 6.1e-72 275.0 231 62.8
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 8.0e-72 274.6 275 53.8
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 1.0e-71 274.2 227 62.1
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 1.8e-71 273.5 237 61.2
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 2.3e-71 273.1 267 56.2
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 6.8e-71 271.6 249 59.0
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 6.8e-71 271.6 266 54.1
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 1.2e-70 270.8 271 56.8
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 1.5e-70 270.4 249 58.6
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 1.5e-70 270.4 272 54.8
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 1.5e-70 270.4 262 53.4
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 4.4e-70 268.9 249 55.4
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 7.5e-70 268.1 262 53.8
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 1.7e-69 266.9 249 58.6
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.7e-69 266.9 267 53.2
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 3.7e-69 265.8 280 55.7
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 1.1e-68 264.2 211 61.1
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 1.9e-68 263.5 271 56.8
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 1.9e-68 263.5 269 53.9
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 7.0e-68 261.5 272 52.6
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 9.2e-68 261.2 269 53.5
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 6.0e-67 258.5 246 56.9
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 6.0e-67 258.5 271 54.2
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 1.3e-66 257.3 213 61.0
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 3.9e-66 255.8 271 53.9
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 3.9e-66 255.8 271 53.9
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 3.9e-66 255.8 271 53.9
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 8.6e-66 254.6 252 53.6
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 3.3e-65 252.7 276 50.7
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 3.6e-64 249.2 204 63.7
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.1e-63 247.7 204 63.7
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 1.5e-62 243.8 206 60.2
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 2.6e-62 243.0 253 51.8
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 3.4e-62 242.7 209 59.8
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 2.9e-61 239.6 254 52.4
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 2.9e-61 239.6 217 54.4
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 1.1e-60 237.7 275 51.6
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 3.2e-60 236.1 251 50.2
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 3.5e-59 232.6 250 53.2
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 4.6e-59 232.3 199 59.3
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 6.0e-59 231.9 211 57.3
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 1.6e-56 223.8 192 54.2
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 6.2e-56 221.9 194 57.7
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 9.9e-54 214.5 205 55.6
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 6.0e-51 205.3 230 52.2
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.0e-50 204.5 221 50.2
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 2.3e-50 203.4 275 43.6
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 5.6e-49 198.7 214 45.8
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 3.6e-48 196.1 214 44.9
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 1.5e-46 190.7 197 51.3
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 1.3e-45 187.6 156 58.3
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 2.9e-45 186.4 208 54.3
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.4e-31 141.0 135 55.6
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 1.8e-31 140.6 213 38.0
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 2.6e-30 136.7 187 39.6
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 2.4e-23 113.6 191 38.7
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 4.9e-21 105.9 178 33.7
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 1.0e-18 98.2 187 32.6
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 5.1e-18 95.9 75 60.0
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 1.3e-16 91.3 124 39.5
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 3.1e-15 86.7 63 65.1
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 1.2e-14 84.7 162 33.3
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.7e-13 80.9 68 52.9
C02p16600 Brassica napus HOM05D006815 ORTHO05D008536 2.7e-11 73.6 71 54.9
BolC2t07761H Brassica oleracea HOM05D006815 ORTHO05D008536 1.8e-10 70.9 71 53.5
Nn3g21845 Nelumbo nucifera HOM05D006815 ORTHO05D008536 7.7e-06 55.5 42 57.1


User provided reference genes

Program Settings