Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 2.5e-176 622.1 327 100.0
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 1.4e-107 393.7 324 64.5
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 1.4e-99 367.1 328 63.4
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 5.1e-97 358.6 377 55.2
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 2.8e-95 352.8 324 60.8
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 7.6e-93 344.7 328 58.5
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 1.3e-92 344.0 323 56.3
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 2.1e-90 336.7 324 57.1
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.9e-88 330.1 326 56.7
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.3e-88 329.3 326 56.4
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 4.3e-88 328.9 326 59.5
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 3.6e-87 325.9 325 56.9
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 8.1e-87 324.7 329 58.1
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 1.1e-86 324.3 323 55.7
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 5.3e-86 322.0 324 56.2
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 3.4e-85 319.3 329 60.2
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 2.2e-84 316.6 325 56.6
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 2.1e-82 310.1 330 53.9
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 1.9e-80 303.5 328 53.0
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 7.3e-80 301.6 326 52.8
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 2.1e-79 300.1 309 55.0
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 1.8e-78 297.0 326 50.3
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 4.0e-78 295.8 325 53.2
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 5.3e-78 295.4 326 52.1
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 2.6e-77 293.1 343 51.9
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 9.9e-77 291.2 327 52.6
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 2.9e-76 289.7 287 55.1
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 3.8e-76 289.3 333 52.0
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 4.2e-75 285.8 375 46.9
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 4.6e-74 282.3 327 52.0
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 7.9e-74 281.6 259 59.8
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 7.9e-74 281.6 327 52.0
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 1.0e-73 281.2 325 52.6
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 1.8e-73 280.4 328 50.0
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 3.9e-73 279.3 331 48.6
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 2.5e-72 276.6 326 49.1
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 5.6e-72 275.4 323 54.8
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 9.6e-72 274.6 327 48.9
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 1.3e-71 274.2 325 49.5
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 6.2e-71 271.9 323 54.2
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 2.4e-70 270.0 257 56.8
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 3.1e-70 269.6 330 46.7
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 3.1e-70 269.6 334 47.6
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 9.0e-70 268.1 324 54.0
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 3.4e-69 266.2 322 47.2
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 2.2e-68 263.5 388 45.4
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 3.8e-68 262.7 332 47.0
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 8.4e-68 261.5 324 50.6
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 2.5e-67 260.0 323 52.9
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 2.5e-67 260.0 337 46.9
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 1.2e-66 257.7 331 45.6
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 2.1e-66 256.9 328 45.7
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 2.7e-66 256.5 328 45.7
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 3.5e-66 256.1 331 45.3
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 1.8e-65 253.8 326 48.5
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 2.3e-65 253.4 324 47.8
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 1.1e-64 251.1 291 51.9
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 1.3e-63 247.7 323 48.9
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 1.3e-60 237.7 287 49.1
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 1.3e-60 237.7 239 53.6
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 1.7e-60 237.3 327 45.0
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 5.0e-60 235.7 219 58.4
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 6.5e-60 235.3 323 48.0
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.9e-59 233.8 333 43.8
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 2.7e-58 229.9 329 43.8
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 2.7e-58 229.9 303 50.2
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 2.7e-58 229.9 322 43.5
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 3.5e-58 229.6 322 43.5
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 4.6e-58 229.2 360 38.6
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 7.9e-58 228.4 323 47.4
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 3.9e-57 226.1 260 51.5
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 3.9e-57 226.1 295 51.5
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 8.7e-57 224.9 323 45.8
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 9.0e-54 214.9 222 55.0
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 2.6e-53 213.4 322 41.6
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 4.5e-53 212.6 326 45.4
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 6.5e-52 208.8 331 42.3
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 3.2e-51 206.5 324 40.7
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 3.2e-51 206.5 333 41.7
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 7.9e-50 201.8 260 46.9
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 2.5e-48 196.8 248 50.4
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 3.3e-48 196.4 299 42.8
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 1.7e-47 194.1 270 44.4
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 1.1e-46 191.4 297 40.7
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 1.8e-46 190.7 365 35.6
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 1.5e-45 187.6 328 39.9
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 3.8e-44 183.0 293 41.3
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 4.7e-42 176.0 323 39.9
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 2.6e-40 170.2 323 39.0
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 2.0e-37 160.6 178 48.9
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 2.2e-36 157.1 185 56.2
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 8.0e-34 148.7 179 49.2
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.2e-31 140.6 160 50.6
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 1.0e-28 131.7 79 78.5
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 4.2e-27 126.3 109 57.8
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 6.8e-25 119.0 79 69.6
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.7e-23 113.2 122 52.5
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 6.3e-23 112.5 268 32.8
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 5.5e-19 99.4 74 68.9
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 9.4e-19 98.6 343 26.5
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 1.0e-17 95.1 89 58.4
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 1.2e-16 91.7 336 28.0
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 2.4e-14 84.0 399 22.3
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 4.1e-14 83.2 65 60.0
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 2.0e-13 80.9 66 63.6
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 2.7e-13 80.5 48 75.0
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 7.2e-11 72.4 66 60.6
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 1.2e-10 71.6 41 82.9
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 4.7e-10 69.7 69 53.6
Pp3c4_24350 Physcomitrium patens HOM05D007071 ORTHO05D008677 6.1e-10 69.3 401 21.4
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 2.9e-07 60.5 61 54.1
Mapoly0045s0075 Marchantia polymorpha HOM05D007071 ORTHO05D008677 1.4e-06 58.2 115 29.6
Actinidia26606 Actinidia chinensis HOM05D002116 ORTHO05D002438 1.8e-06 57.8 127 35.4


User provided reference genes

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