Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G036100 Manihot esculenta HOM05D001890 ORTHO05D008163 9.8e-147 523.5 270 100.0
Potri.006G200900 Populus trichocarpa HOM05D001890 ORTHO05D008163 1.1e-86 323.9 285 66.0
Atru.chr8.1300 Acer truncatum HOM05D001890 ORTHO05D008163 2.4e-84 316.2 266 60.5
Sabra06G0154600 Salix brachista HOM05D001890 ORTHO05D008163 5.0e-82 308.5 284 63.4
TWI74G0853 Tripterygium wilfordii HOM05D001890 ORTHO05D008163 1.1e-81 307.4 282 61.0
Dinv11885 Davidia involucrata HOM05D001890 ORTHO05D008163 2.5e-81 306.2 222 69.8
Haze_20108 Corylus avellana HOM05D001890 ORTHO05D008163 8.8e-79 297.7 277 59.2
Ciclev10012448m.g Citrus clementina HOM05D001890 ORTHO05D008163 4.3e-78 295.4 277 57.0
Gorai.002G233900 Gossypium raimondii HOM05D001890 ORTHO05D008163 5.7e-78 295.0 276 61.2
QL07p026864 Quercus lobata HOM05D001890 ORTHO05D008163 9.7e-78 294.3 261 60.5
Actinidia03864 Actinidia chinensis HOM05D001890 ORTHO05D008163 2.8e-77 292.7 279 58.4
Actinidia03972 Actinidia chinensis HOM05D001890 ORTHO05D008163 6.3e-77 291.6 275 58.5
Thecc.05G108500 Theobroma cacao HOM05D001890 ORTHO05D008163 8.2e-77 291.2 277 58.8
GSVIVG01022555001 Vitis vinifera HOM05D001890 ORTHO05D008163 8.2e-77 291.2 269 59.5
Gohir.A01G200100 Gossypium hirsutum HOM05D001890 ORTHO05D008163 2.4e-76 289.7 276 60.1
Gohir.D01G190200 Gossypium hirsutum HOM05D001890 ORTHO05D008163 6.9e-76 288.1 276 60.1
MD12G1044000 Malus domestica HOM05D001890 ORTHO05D008163 2.6e-75 286.2 270 59.3
Rhsim03G0062200 Rhododendron simsii HOM05D001890 ORTHO05D008163 1.7e-74 283.5 282 58.9
Prupe.7G091100 Prunus persica HOM05D001890 ORTHO05D008163 8.5e-74 281.2 267 58.8
TPR.G21244 Trifolium pratense HOM05D001890 ORTHO05D003442 1.9e-73 280.0 268 58.6
TAR369G0922 Trochodendron aralioides HOM05D001890 ORTHO05D008163 9.4e-73 277.7 259 56.4
CiPaw.09G022900 Carya illinoinensis HOM05D001890 ORTHO05D008163 1.2e-72 277.3 224 63.8
MELO3C009561.2 Cucumis melo HOM05D001890 ORTHO05D008163 2.1e-72 276.6 217 66.4
MD14G1043000 Malus domestica HOM05D001890 ORTHO05D008163 2.1e-72 276.6 267 58.4
Glyma.02G193000 Glycine max HOM05D001890 ORTHO05D008163 2.7e-72 276.2 277 56.7
Nn2g14391 Nelumbo nucifera HOM05D001890 ORTHO05D008163 2.7e-72 276.2 210 65.2
Glyma.10G083800 Glycine max HOM05D001890 ORTHO05D008163 4.7e-72 275.4 275 56.4
SHI39226 Sapria himalayana HOM05D001890 ORTHO05D008163 6.1e-72 275.0 210 64.3
Eucgr.A02558 Eucalyptus grandis HOM05D001890 ORTHO05D008163 7.9e-72 274.6 275 56.4
PGSC0003DMG400021337 Solanum tuberosum HOM05D001890 ORTHO05D008163 7.9e-72 274.6 240 60.8
CsaV3_3G038180 Cucumis sativus L. HOM05D001890 ORTHO05D008163 1.0e-71 274.2 217 65.9
CARHR207150 Cardamine hirsuta HOM05D001890 ORTHO05D008163 1.4e-71 273.9 209 63.6
FAN14G3769 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.8e-71 273.5 265 58.1
Lalb_Chr06g0173221 Lupinus albus HOM05D001890 ORTHO05D008163 2.3e-71 273.1 278 59.4
Lj5g0002159 Lotus japonicus HOM05D001890 ORTHO05D008163 3.0e-71 272.7 275 54.9
VMungo0251G0199 Vigna mungo HOM05D001890 ORTHO05D008163 3.0e-71 272.7 210 64.8
RcHm_v2.0_Chr3g0476781 Rosa chinensis HOM05D001890 ORTHO05D008163 3.9e-71 272.3 266 57.5
Aqoxy1G01947 Aquilegia oxysepala HOM05D001890 ORTHO05D008163 6.7e-71 271.6 270 55.2
Sopen01g002850 Solanum pennellii HOM05D001890 ORTHO05D008163 6.7e-71 271.6 241 61.0
CANSAT64G1416 Cannabis sativa HOM05D001890 ORTHO05D008163 8.8e-71 271.2 240 61.2
Solyc01g006860.3 Solanum lycopersicum HOM05D001890 ORTHO05D008163 1.5e-70 270.4 240 60.4
arahy.Tifrunner.gnm1.ann1.59XBIZ Arachis hypogaea HOM05D001890 ORTHO05D008163 2.0e-70 270.0 287 54.7
Hma1.2p1_2851F.1_g329460 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 2.0e-70 270.0 178 74.2
Aa31LG5G17190 Aethionema arabicum HOM05D001890 ORTHO05D008163 2.6e-70 269.6 202 62.4
COL.COLO4_29517 Corchorus olitorius HOM05D001890 ORTHO05D008163 2.6e-70 269.6 274 55.5
FAN05G2088 Fragaria x ananassa HOM05D001890 ORTHO05D008163 2.6e-70 269.6 196 67.9
FvH4_6g20780 Fragaria vesca HOM05D001890 ORTHO05D008163 3.3e-70 269.2 266 57.9
ECA233G0010 Erigeron canadensis HOM05D001890 ORTHO05D008163 4.4e-70 268.9 238 58.4
Migut.J00743 Erythranthe guttata HOM05D001890 ORTHO05D008163 4.4e-70 268.9 226 62.8
THA.LOC104816627 Tarenaya hassleriana HOM05D001890 ORTHO05D008163 4.4e-70 268.9 276 53.3
Cc06_g06850 Coffea canephora HOM05D001890 ORTHO05D008163 7.4e-70 268.1 233 61.8
SGA_v2.0_scaffold18G08441 Striga asiatica HOM05D001890 ORTHO05D008163 9.7e-70 267.7 204 64.2
MSTRG.19331 Avicennia marina HOM05D001890 ORTHO05D008163 1.3e-69 267.3 212 63.2
FAN09G2968 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.3e-69 267.3 258 58.1
DCAR_013451 Daucus carota HOM05D001890 ORTHO05D008163 1.7e-69 266.9 261 57.5
Sed0014416 Sechium edule HOM05D001890 ORTHO05D008163 1.7e-69 266.9 275 55.6
Lsat_1_v5_gn_6_34681 Lactuca sativa HOM05D001890 ORTHO05D008163 3.7e-69 265.8 275 53.5
HanXRQChr02g0053101 Helianthus annuus HOM05D001890 ORTHO05D008163 6.3e-69 265.0 270 54.4
BolC3t12860H Brassica oleracea HOM05D001890 ORTHO05D003442 1.4e-68 263.8 275 53.8
Phvul.007G266300 Phaseolus vulgaris HOM05D001890 ORTHO05D008163 4.1e-68 262.3 272 54.0
AL6G16500 Arabidopsis lyrata HOM05D001890 ORTHO05D008163 1.2e-67 260.8 222 58.6
arahy.Tifrunner.gnm1.ann1.XW59SW Arachis hypogaea HOM05D001890 ORTHO05D008163 1.2e-67 260.8 214 65.0
BraA10t45037Z Brassica rapa HOM05D001890 ORTHO05D008163 1.2e-67 260.8 277 52.3
Nitab4.5_0009788g0030 Nicotiana tabacum HOM05D001890 ORTHO05D008163 2.6e-67 259.6 218 60.6
BcaB01g05992 Brassica carinata HOM05D001890 ORTHO05D008163 5.9e-67 258.5 274 53.6
AT5G06410 Arabidopsis thaliana HOM05D001890 ORTHO05D008163 7.7e-67 258.1 270 53.0
EL10Ac5g11823 Beta vulgaris HOM05D001890 ORTHO05D008163 7.7e-67 258.1 227 60.8
A03p02720 Brassica napus HOM05D001890 ORTHO05D008163 1.0e-66 257.7 276 52.9
C03p03150 Brassica napus HOM05D001890 ORTHO05D003442 1.0e-66 257.7 274 53.6
BraA03t09635Z Brassica rapa HOM05D001890 ORTHO05D008163 2.2e-66 256.5 275 52.7
MBI05_g37895_MAGBIO Magnolia biondii HOM05D001890 ORTHO05D008163 2.2e-66 256.5 210 60.5
BolC9t59784H Brassica oleracea HOM05D001890 ORTHO05D008163 2.9e-66 256.1 272 51.1
vmacro07500 Vaccinium macrocarpon HOM05D001890 ORTHO05D008163 5.0e-66 255.4 291 54.3
Medtr1g055300 Medicago truncatula HOM05D001890 ORTHO05D008163 6.5e-66 255.0 259 54.8
PSO170G4460 Papaver somniferum HOM05D001890 ORTHO05D008163 1.5e-65 253.8 269 50.9
Thhalv10014422m.g Eutrema salsugineum HOM05D001890 ORTHO05D008163 2.5e-65 253.1 270 51.5
SGA_v2.0_scaffold116G32259 Striga asiatica HOM05D001890 ORTHO05D008163 2.5e-65 253.1 230 57.4
PSO407G0155 Papaver somniferum HOM05D001890 ORTHO05D008163 7.2e-65 251.5 273 50.5
Nitab4.5_0005218g0010 Nicotiana tabacum HOM05D001890 ORTHO05D008163 2.1e-64 250.0 209 61.7
Oeu045017.1 Olea europaea HOM05D001890 ORTHO05D008163 6.1e-64 248.4 239 55.6
CAN.G911.27 Capsicum annuum HOM05D001890 ORTHO05D008163 9.7e-62 241.1 250 57.6
PGR004G2365 Punica granatum HOM05D001890 ORTHO05D008163 2.2e-61 240.0 268 49.6
Ah.12g054380 Amaranthus hybridus HOM05D001890 ORTHO05D008163 8.2e-61 238.0 197 62.4
Oeu020166.1 Olea europaea HOM05D001890 ORTHO05D008163 8.2e-61 238.0 204 57.4
ClCG10G018120 Citrullus lanatus HOM05D001890 ORTHO05D008163 4.1e-60 235.7 282 51.8
ATR0697G265 Amborella trichopoda HOM05D001890 ORTHO05D008163 1.2e-59 234.2 195 59.0
unitig_578.g15805 Utricularia gibba HOM05D001890 ORTHO05D008163 2.2e-58 229.9 265 49.1
HPP92_018252 Vanilla planifolia HOM05D001890 ORTHO05D008163 3.8e-58 229.2 234 51.3
Psat6g128200 Pisum sativum HOM05D001890 ORTHO05D008163 2.5e-57 226.5 298 47.0
Zm00001eb161520 Zea mays HOM05D001890 ORTHO05D008163 2.7e-56 223.0 191 59.2
CSS0004156 Camellia sinensis var. sinensis HOM05D001890 ORTHO05D008163 2.3e-55 219.9 154 72.7
Dinv25069 Davidia involucrata HOM05D001890 ORTHO05D003442 5.7e-54 215.3 197 59.4
RcHm_v2.0_Chr3g0476751 Rosa chinensis HOM05D001890 ORTHO05D008163 5.7e-54 215.3 267 50.2
FAN02G4586 Fragaria x ananassa HOM05D001890 ORTHO05D003442 2.8e-53 213.0 165 66.7
Os12g0456200 Oryza sativa ssp. japonica HOM05D001890 ORTHO05D008163 1.1e-52 211.1 167 62.9
SEGI_25149 Sequoiadendron giganteum HOM05D001890 ORTHO05D008163 7.7e-51 204.9 208 48.1
Sc22g0003100 Simmondsia chinensis HOM05D001890 ORTHO05D008163 5.0e-50 202.2 153 67.3
FAN05G2830 Fragaria x ananassa HOM05D001890 ORTHO05D008163 1.9e-49 200.3 144 70.1
AUR62036336 Chenopodium quinoa HOM05D001890 ORTHO05D008163 4.2e-49 199.1 154 63.6
Lj3C241T9 Lonicera japonica HOM05D001890 ORTHO05D008163 4.0e-47 192.6 142 66.2
Hund10835 Selenicereus undatus HOM05D001890 ORTHO05D008163 1.2e-46 191.0 177 58.2
CDE06G1636 Ceratophyllum demersum HOM05D001890 ORTHO05D000511 2.6e-46 189.9 275 40.7
Psat2g142840 Pisum sativum HOM05D001890 ORTHO05D008163 2.8e-45 186.4 199 53.3
Actinidia37766 Actinidia chinensis HOM05D001890 ORTHO05D008163 1.1e-44 184.5 184 56.0
Sp6g36440 Schrenkiella parvula HOM05D001890 ORTHO05D008163 3.5e-43 179.5 203 50.2
AagrBONN_evm.TU.Sc2ySwM_117.1093 Anthoceros agrestis HOM05D001890 ORTHO05D008163 1.0e-42 177.9 204 43.1
Cpa.g.sc104.2 Carica papaya HOM05D001890 ORTHO05D008163 2.5e-41 173.3 183 55.7
Pp3c16_9340 Physcomitrium patens HOM05D001890 ORTHO05D008163 2.8e-40 169.9 188 45.2
Hma1.2p1_2851F.1_g329450 Hydrangea macrophylla HOM05D001890 ORTHO05D008163 4.9e-37 159.1 267 42.3
AUR62030695 Chenopodium quinoa HOM05D001890 ORTHO05D008163 1.9e-33 147.1 113 62.8
CBR_g70174 Chara braunii HOM05D001890 ORTHO05D008163 2.3e-31 140.2 201 40.8
Mapoly0055s0040 Marchantia polymorpha HOM05D001890 ORTHO05D008163 8.9e-31 138.3 190 39.5
Psat1g223560 Pisum sativum HOM05D001890 ORTHO05D008163 7.3e-25 118.6 118 50.0
Cre11.g467718 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 6.8e-23 112.1 193 35.2
Cre12.g507559 Chlamydomonas reinhardtii HOM05D001890 ORTHO05D008163 6.8e-23 112.1 193 35.2
Peaxi162Scf00675g00610 Petunia axillaris HOM05D001890 ORTHO05D008163 1.2e-22 111.3 112 54.5
Lj1g0015991 Lotus japonicus HOM05D001890 ORTHO05D008163 5.4e-20 102.4 82 67.1
SMO353G0218 Selaginella moellendorffii HOM05D001890 ORTHO05D008163 2.1e-16 90.5 123 35.8
MCO10G285 Micromonas commoda HOM05D001890 ORTHO05D008163 1.8e-15 87.4 225 28.9
Peaxi162Scf00675g00611 Petunia axillaris HOM05D001890 ORTHO05D008163 9.9e-14 81.6 100 47.0
Lj3C241T8 Lonicera japonica HOM05D001890 ORTHO05D008163 1.4e-12 77.8 121 42.1
Lalb_Chr25g0282121 Lupinus albus HOM05D001890 ORTHO05D008163 1.9e-12 77.4 103 45.6
CBR_g31284 Chara braunii HOM05D001890 ORTHO05D008163 4.6e-11 72.8 174 30.5
Peaxi162Scf00767g00522 Petunia axillaris HOM05D001890 ORTHO05D008163 3.1e-07 60.1 211 28.4
SalBow1G6520 Salvia bowleyana HOM05D001890 ORTHO05D008163 7.6e-06 55.5 47 53.2


User provided reference genes

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