Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G033000 Manihot esculenta HOM05D007097 ORTHO05D008131 5.6e-127 457.6 229 100.0
Manes.09G044900 Manihot esculenta HOM05D007097 ORTHO05D008131 5.7e-87 324.7 217 76.5
Sabra06G0157000 Salix brachista HOM05D007097 ORTHO05D008131 2.5e-58 229.6 230 57.4
TWI74G0793 Tripterygium wilfordii HOM05D007097 ORTHO05D008131 3.7e-54 215.7 224 51.8
CiPaw.09G020600 Carya illinoinensis HOM05D007097 ORTHO05D008131 8.6e-51 204.5 238 48.7
Gorai.006G149800 Gossypium raimondii HOM05D007097 ORTHO05D008131 1.9e-50 203.4 231 48.9
COL.COLO4_29582 Corchorus olitorius HOM05D007097 ORTHO05D008131 1.0e-48 197.6 231 45.0
MD12G1039700 Malus domestica HOM05D007097 ORTHO05D008131 1.0e-48 197.6 240 47.9
Cfa020025 Carpinus fangiana HOM05D007097 ORTHO05D008131 1.8e-48 196.8 235 48.9
Cpa.g.sc104.37 Carica papaya HOM05D007097 ORTHO05D008131 6.8e-48 194.9 226 49.1
Prupe.7G095200 Prunus persica HOM05D007097 ORTHO05D008131 8.9e-48 194.5 235 46.0
Haze_20191 Corylus avellana HOM05D007097 ORTHO05D008131 1.5e-47 193.7 231 48.1
Gohir.A09G134600 Gossypium hirsutum HOM05D007097 ORTHO05D008131 1.7e-46 190.3 235 46.4
Gohir.D09G131100 Gossypium hirsutum HOM05D007097 ORTHO05D008131 1.7e-46 190.3 235 46.0
Thecc.05G103600 Theobroma cacao HOM05D007097 ORTHO05D008131 2.8e-46 189.5 227 47.6
FvH4_6g20260 Fragaria vesca HOM05D007097 ORTHO05D008131 4.1e-45 185.7 246 44.7
FAN02G1136 Fragaria x ananassa HOM05D007097 ORTHO05D008131 2.7e-44 183.0 247 45.7
FAN14G0555 Fragaria x ananassa HOM05D007097 ORTHO05D008131 5.9e-44 181.8 231 45.5
FAN05G2168 Fragaria x ananassa HOM05D007097 ORTHO05D008131 7.8e-44 181.4 232 46.1
FAN05G0285 Fragaria x ananassa HOM05D007097 ORTHO05D008131 8.6e-43 177.9 247 45.3
FAN09G3875 Fragaria x ananassa HOM05D007097 ORTHO05D008131 1.6e-41 173.7 247 44.1
MD14G1038300 Malus domestica HOM05D007097 ORTHO05D008131 4.7e-41 172.2 238 42.9
Nn6g34702 Nelumbo nucifera HOM05D007097 ORTHO05D008131 1.1e-37 161.0 255 40.8
ClCG10G018390 Citrullus lanatus HOM05D007097 ORTHO05D008131 5.0e-35 152.1 241 39.4
Lalb_Chr01g0017871 Lupinus albus HOM05D007097 ORTHO05D008131 1.1e-34 151.0 231 42.4
RcHm_v2.0_Chr3g0475851 Rosa chinensis HOM05D007097 ORTHO05D008131 1.1e-34 151.0 238 39.1
Ciclev10012818m.g Citrus clementina HOM05D007097 ORTHO05D008131 4.3e-34 149.1 219 41.1
Atru.chr8.1373 Acer truncatum HOM05D007097 ORTHO05D008131 6.2e-33 145.2 213 40.8
Glyma.03G201700 Glycine max HOM05D007097 ORTHO05D008131 1.8e-32 143.7 215 39.5
QL07p036825 Quercus lobata HOM05D007097 ORTHO05D008131 5.2e-32 142.1 260 37.7
Lalb_Chr20g0111401 Lupinus albus HOM05D007097 ORTHO05D008131 2.9e-30 136.3 224 37.9
TAR633G2246 Trochodendron aralioides HOM05D007097 ORTHO05D008131 6.4e-30 135.2 238 36.6
VMungo0720G1866 Vigna mungo HOM05D007097 ORTHO05D008131 1.4e-29 134.0 217 36.9
Actinidia37742 Actinidia chinensis HOM05D007097 ORTHO05D008131 1.9e-29 133.7 250 35.2
Nn2g14294 Nelumbo nucifera HOM05D007097 ORTHO05D008131 4.1e-29 132.5 244 38.5
Lalb_Chr25g0288011 Lupinus albus HOM05D007097 ORTHO05D008131 1.2e-28 131.0 232 37.9
Sed0025399 Sechium edule HOM05D007097 ORTHO05D008131 6.0e-28 128.6 225 36.4
Sed0014531 Sechium edule HOM05D007097 ORTHO05D008131 1.3e-27 127.5 251 35.5
DCAR_020707 Daucus carota HOM05D007097 ORTHO05D008131 3.0e-27 126.3 220 35.9
Dinv31755 Davidia involucrata HOM05D007097 ORTHO05D008131 3.0e-27 126.3 238 35.3
CAN.G1245.7 Capsicum annuum HOM05D007097 ORTHO05D008131 1.5e-26 124.0 238 36.1
PGSC0003DMG400028148 Solanum tuberosum HOM05D007097 ORTHO05D008131 3.3e-26 122.9 234 34.6
Sopen10g032440 Solanum pennellii HOM05D007097 ORTHO05D008131 4.3e-26 122.5 236 35.6
Solyc10g081930.1 Solanum lycopersicum HOM05D007097 ORTHO05D008131 5.6e-26 122.1 236 35.6
Glyma.10G081100 Glycine max HOM05D007097 ORTHO05D008131 2.1e-25 120.2 224 35.3
Cc06_g06500 Coffea canephora HOM05D007097 ORTHO05D008131 4.7e-25 119.0 267 31.1
Ca_11701_v3 Cicer arietinum L. HOM05D007097 ORTHO05D008131 1.1e-24 117.9 214 34.1
CsaV3_3G037910 Cucumis sativus L. HOM05D007097 ORTHO05D008131 1.1e-24 117.9 242 33.9
Lsat_1_v5_gn_1_57020 Lactuca sativa HOM05D007097 ORTHO05D008131 1.1e-24 117.9 242 34.7
AUR62006282 Chenopodium quinoa HOM05D007097 ORTHO05D008131 1.8e-24 117.1 256 35.5
HPP92_026079 Vanilla planifolia HOM05D007097 ORTHO05D008131 5.2e-24 115.5 258 31.4
HPP92_025143 Vanilla planifolia HOM05D007097 ORTHO05D008131 6.8e-24 115.2 258 31.4
Peaxi162Scf00211g00105 Petunia axillaris HOM05D007097 ORTHO05D008131 8.9e-24 114.8 232 33.2
MELO3C009534.2 Cucumis melo HOM05D007097 ORTHO05D008131 1.2e-23 114.4 243 32.9
Rhsim03G0065800 Rhododendron simsii HOM05D007097 ORTHO05D008131 7.6e-23 111.7 232 33.6
TAR623G1722 Trochodendron aralioides HOM05D007097 ORTHO05D008131 1.3e-22 110.9 253 33.2
Lsat_1_v5_gn_2_55400 Lactuca sativa HOM05D007097 ORTHO05D008131 2.2e-22 110.2 225 32.0
Nitab4.5_0005325g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 4.9e-22 109.0 242 32.6
Lj5g0024854 Lotus japonicus HOM05D007097 ORTHO05D008131 1.9e-21 107.1 230 32.6
Nitab4.5_0000020g0090 Nicotiana tabacum HOM05D007097 ORTHO05D008131 2.4e-21 106.7 251 32.3
Glyma.02G197300 Glycine max HOM05D007097 ORTHO05D008131 3.2e-21 106.3 217 30.9
Migut.J00707 Erythranthe guttata HOM05D007097 ORTHO05D008131 4.1e-21 105.9 263 30.4
Medtr1g057600 Medicago truncatula HOM05D007097 ORTHO05D008131 5.4e-21 105.5 218 29.4
Psat6g114400 Pisum sativum HOM05D007097 ORTHO05D008131 7.1e-21 105.1 219 33.3
Nitab4.5_0001287g0020 Nicotiana tabacum HOM05D007097 ORTHO05D008131 6.0e-20 102.1 225 33.3
ATR0772G224 Amborella trichopoda HOM05D007097 ORTHO05D008131 7.8e-20 101.7 226 34.5
PGSC0003DMG400016423 Solanum tuberosum HOM05D007097 ORTHO05D008131 1.0e-19 101.3 244 30.7
SGA_v2.0_scaffold13G06627 Striga asiatica HOM05D007097 ORTHO05D008131 1.0e-19 101.3 274 29.6
Sopen01g003170 Solanum pennellii HOM05D007097 ORTHO05D008131 1.3e-19 100.9 241 30.7
SGA_v2.0_scaffold31G12846 Striga asiatica HOM05D007097 ORTHO05D008131 1.7e-19 100.5 262 29.8
Solyc01g007190.3 Solanum lycopersicum HOM05D007097 ORTHO05D008131 3.0e-19 99.8 258 29.8
Phvul.007G268300 Phaseolus vulgaris HOM05D007097 ORTHO05D008131 3.9e-19 99.4 221 30.8
Sc02g0000610 Simmondsia chinensis HOM05D007097 ORTHO05D008131 3.9e-19 99.4 177 37.3
HanXRQChr01g0025661 Helianthus annuus HOM05D007097 ORTHO05D008131 6.6e-19 98.6 220 30.9
AUR62026332 Chenopodium quinoa HOM05D007097 ORTHO05D008131 5.6e-18 95.5 222 32.0
SalBow5G4860 Salvia bowleyana HOM05D007097 ORTHO05D008131 9.6e-18 94.7 213 30.5
HanXRQChr13g0398381 Helianthus annuus HOM05D007097 ORTHO05D008131 1.2e-17 94.4 241 28.6
HanXRQChr09g0239941 Helianthus annuus HOM05D007097 ORTHO05D008131 2.8e-17 93.2 228 26.8
TPR.G2776 Trifolium pratense HOM05D007097 ORTHO05D008131 3.6e-17 92.8 251 27.5
Ah.08g210070 Amaranthus hybridus HOM05D007097 ORTHO05D008131 4.7e-17 92.4 246 32.1
Eucgr.K02617 Eucalyptus grandis HOM05D007097 ORTHO05D008131 1.1e-16 91.3 233 30.9
ECA248G2186 Erigeron canadensis HOM05D007097 ORTHO05D008131 1.4e-16 90.9 254 29.1
unitig_578.g16474 Utricularia gibba HOM05D007097 ORTHO05D008131 1.4e-16 90.9 258 28.7
Lsat_1_v5_gn_1_58041 Lactuca sativa HOM05D007097 ORTHO05D008131 1.8e-16 90.5 240 28.3
Actinidia06180 Actinidia chinensis HOM05D000517 ORTHO05D008131 2.4e-16 90.1 220 30.5
Actinidia37743 Actinidia chinensis HOM05D007097 ORTHO05D008131 2.4e-16 90.1 101 46.5
SGA_v2.0_scaffold35G14013 Striga asiatica HOM05D007097 ORTHO05D008131 4.0e-16 89.4 228 28.5
Zm00001eb065580 Zea mays HOM05D007097 ORTHO05D008131 5.2e-16 89.0 265 29.8
unitig_22.g5144 Utricularia gibba HOM05D007097 ORTHO05D008131 6.8e-16 88.6 252 27.8
Os04g0685700 Oryza sativa ssp. japonica HOM05D007097 ORTHO05D008131 1.2e-15 87.8 247 27.9
DCAR_009176 Daucus carota HOM05D007097 ORTHO05D008131 2.0e-15 87.0 213 32.4
Nn1g01483 Nelumbo nucifera HOM05D007097 ORTHO05D008131 5.8e-15 85.5 137 42.3
GSVIVG01033951001 Vitis vinifera HOM05D009231 ORTHO05D010800 2.9e-14 83.2 198 33.3
Nitab4.5_0010913g0010 Nicotiana tabacum HOM05D007097 ORTHO05D008131 1.6e-12 77.4 223 30.5
HanXRQChr16g0532971 Helianthus annuus HOM05D007097 ORTHO05D008131 1.9e-10 70.5 151 32.5
Nn2g13712 Nelumbo nucifera HOM05D007097 ORTHO05D008131 9.6e-10 68.2 134 37.3
Zm00001eb434190 Zea mays HOM05D007097 ORTHO05D008131 1.6e-09 67.4 250 25.6
Nn8g40734 Nelumbo nucifera HOM05D007097 ORTHO05D008131 8.1e-09 65.1 188 31.4
Mapoly0048s0108 Marchantia polymorpha HOM05D017347 ORTHO05D008131 4.0e-08 62.8 107 36.4
Pp3c10_10040 Physcomitrium patens HOM05D017347 ORTHO05D008131 7.6e-07 58.5 107 36.4
SMO119G0030 Selaginella moellendorffii HOM05D017347 ORTHO05D008131 7.6e-07 58.5 108 34.3
SEGI_34425 Sequoiadendron giganteum HOM05D017347 ORTHO05D008131 9.9e-07 58.2 111 33.3
Peaxi162Scf00388g01015 Petunia axillaris HOM05D007097 ORTHO05D008131 4.9e-06 55.8 88 38.6


User provided reference genes

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