Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 5.0e-208 727.6 395 100.0
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 4.9e-203 711.1 397 94.0
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 1.8e-165 586.3 427 81.5
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 1.2e-161 573.5 381 87.7
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 1.5e-159 566.6 408 82.4
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 3.3e-159 565.5 388 85.3
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 3.2e-154 548.9 432 77.8
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 4.8e-150 535.0 402 78.6
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 8.1e-150 534.3 365 84.4
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 1.1e-149 533.9 402 76.9
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 2.1e-145 519.6 402 77.1
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 1.4e-141 506.9 411 70.8
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 9.1e-117 424.5 258 92.2
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 6.1e-113 411.8 271 84.1
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 1.0e-75 288.1 381 51.2
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 2.9e-70 270.0 403 46.7
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 7.3e-66 255.4 416 44.2
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 4.4e-63 246.1 395 45.3
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 1.7e-62 244.2 423 43.7
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 1.7e-62 244.2 410 45.1
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 3.5e-60 236.5 401 45.1
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 3.6e-57 226.5 398 44.0
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 4.0e-56 223.0 406 43.1
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 2.0e-55 220.7 416 40.4
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 2.2e-54 217.2 401 41.4
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 1.1e-53 214.9 395 44.1
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 1.9e-53 214.2 395 40.8
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 5.4e-53 212.6 431 39.4
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 2.5e-50 203.8 396 41.9
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 4.3e-50 203.0 388 45.9
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 9.6e-50 201.8 402 39.8
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 2.8e-49 200.3 363 41.6
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 3.6e-49 199.9 411 37.5
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 6.2e-49 199.1 408 40.2
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 1.1e-48 198.4 414 39.6
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 1.2e-47 194.9 403 39.2
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 3.4e-47 193.4 415 40.2
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 5.8e-47 192.6 405 38.5
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 1.1e-45 188.3 393 43.8
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 1.9e-45 187.6 447 36.5
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 5.4e-45 186.0 410 41.2
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 2.1e-44 184.1 389 41.1
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 2.7e-44 183.7 465 35.9
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 1.1e-42 178.3 408 37.7
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 1.9e-42 177.6 400 38.0
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 2.5e-42 177.2 400 37.8
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 4.3e-42 176.4 391 37.3
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 1.6e-41 174.5 398 37.4
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 2.8e-41 173.7 316 40.2
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 3.6e-41 173.3 340 37.6
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 3.6e-41 173.3 319 38.6
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 1.1e-40 171.8 312 38.5
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 3.1e-40 170.2 387 35.9
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 2.0e-39 167.5 383 36.0
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 2.0e-39 167.5 402 35.8
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 3.4e-39 166.8 415 39.0
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 1.7e-38 164.5 391 37.6
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 1.7e-38 164.5 387 38.8
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 2.2e-38 164.1 392 38.3
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 8.4e-38 162.2 404 37.6
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 1.1e-37 161.8 413 36.1
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 1.4e-37 161.4 360 38.3
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 3.2e-37 160.2 372 37.9
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 7.1e-37 159.1 381 36.5
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 4.6e-36 156.4 407 38.3
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 5.1e-35 152.9 448 35.0
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 8.7e-35 152.1 261 48.3
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 3.3e-34 150.2 316 38.6
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 1.3e-33 148.3 238 39.9
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 1.1e-32 145.2 315 36.2
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 1.1e-32 145.2 395 34.9
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 2.4e-32 144.1 396 34.6
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 5.3e-32 142.9 398 33.9
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 9.0e-32 142.1 379 37.2
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 1.5e-31 141.4 390 37.2
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 2.6e-31 140.6 402 35.6
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 1.3e-30 138.3 392 36.2
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 1.3e-30 138.3 253 39.1
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 6.4e-30 136.0 398 33.7
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 1.1e-29 135.2 232 38.8
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 3.2e-29 133.7 388 33.0
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 5.5e-29 132.9 385 35.3
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 4.6e-28 129.8 398 35.4
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 1.0e-27 128.6 389 34.2
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 3.9e-27 126.7 332 36.4
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 7.4e-26 122.5 394 36.3
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 2.4e-24 117.5 240 39.2
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 1.1e-21 108.6 337 34.1
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 1.1e-21 108.6 466 29.6
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 1.0e-19 102.1 319 32.6
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 1.1e-18 98.6 116 47.4
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 2.2e-17 94.4 271 32.8
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 8.5e-14 82.4 95 48.4
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 3.9e-11 73.6 226 30.5
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 2.0e-07 61.2 120 38.3
SEGI_31561 Sequoiadendron giganteum HOM05D007360 ORTHO05D008235 2.0e-07 61.2 278 26.3


User provided reference genes

Program Settings