Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 6.7e-66 253.8 125 100.0
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 3.3e-57 224.9 127 84.3
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 5.7e-57 224.2 125 83.2
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 4.8e-56 221.1 127 84.3
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 2.4e-55 218.8 125 80.0
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 2.4e-55 218.8 125 80.0
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 4.1e-55 218.0 125 79.2
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 9.1e-55 216.9 127 80.3
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.2e-54 216.5 125 79.2
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 1.6e-54 216.1 144 75.0
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 2.0e-54 215.7 128 79.7
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 4.5e-54 214.5 129 76.7
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 4.5e-54 214.5 125 83.2
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 1.7e-53 212.6 133 77.4
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 1.7e-53 212.6 128 81.2
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 2.9e-53 211.8 127 80.3
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 1.1e-52 209.9 127 75.6
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 1.1e-52 209.9 128 75.8
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 3.2e-52 208.4 127 76.4
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 5.5e-52 207.6 125 77.6
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 5.5e-52 207.6 127 77.2
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 5.5e-52 207.6 127 76.4
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 7.2e-52 207.2 130 76.9
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 9.4e-52 206.8 126 78.6
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 9.4e-52 206.8 127 75.6
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.2e-51 206.5 127 74.8
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 1.6e-51 206.1 125 74.4
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.6e-51 206.1 127 74.0
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 1.6e-51 206.1 128 76.6
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 2.7e-51 205.3 125 76.0
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 3.6e-51 204.9 129 77.5
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 3.6e-51 204.9 128 75.0
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 4.7e-51 204.5 129 75.2
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 8.0e-51 203.8 129 76.0
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 1.0e-50 203.4 125 76.0
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 1.0e-50 203.4 122 79.5
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 1.4e-50 203.0 122 78.7
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 1.8e-50 202.6 129 76.0
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 3.0e-50 201.8 128 77.3
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 3.0e-50 201.8 126 76.2
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 4.0e-50 201.4 125 73.6
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 5.2e-50 201.1 125 73.6
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 5.2e-50 201.1 125 71.2
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 6.7e-50 200.7 127 76.4
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 8.8e-50 200.3 125 72.8
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 1.5e-49 199.5 125 72.0
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 2.0e-49 199.1 126 73.8
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 2.0e-49 199.1 125 72.0
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 2.0e-49 199.1 125 72.0
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 3.3e-49 198.4 125 71.2
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 5.7e-49 197.6 124 75.0
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 7.5e-49 197.2 121 73.6
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 7.5e-49 197.2 127 74.8
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 7.5e-49 197.2 117 76.9
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 9.7e-49 196.8 128 75.0
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 1.7e-48 196.1 126 72.2
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 1.7e-48 196.1 126 72.2
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 1.7e-48 196.1 126 72.2
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 1.7e-48 196.1 127 75.6
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 2.8e-48 195.3 126 71.4
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 6.3e-48 194.1 125 72.0
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 8.2e-48 193.7 125 72.0
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 8.2e-48 193.7 127 70.1
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 1.1e-47 193.4 128 68.8
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 1.4e-47 193.0 127 73.2
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 1.4e-47 193.0 126 75.4
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 1.8e-47 192.6 131 72.5
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 3.1e-47 191.8 135 70.4
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 5.3e-47 191.0 120 75.0
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 7.0e-47 190.7 127 72.4
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 2.7e-46 188.7 136 69.9
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 4.5e-46 188.0 124 69.4
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 5.9e-46 187.6 170 60.0
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 7.7e-46 187.2 144 67.4
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 1.0e-45 186.8 126 73.0
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 1.7e-45 186.0 126 72.2
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 1.7e-45 186.0 126 69.0
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 6.5e-45 184.1 121 73.6
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 6.5e-45 184.1 120 71.7
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 1.9e-44 182.6 124 71.0
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 2.5e-44 182.2 118 70.3
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 4.2e-44 181.4 122 69.7
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 2.1e-43 179.1 105 78.1
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 1.0e-42 176.8 109 74.3
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 1.4e-42 176.4 118 67.8
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 8.8e-42 173.7 120 66.7
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 3.4e-41 171.8 112 68.8
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 5.7e-41 171.0 107 75.7
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 3.7e-40 168.3 109 69.7
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 8.3e-40 167.2 125 67.2
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 9.1e-39 163.7 110 71.8
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 1.3e-37 159.8 109 67.0
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.1e-35 152.5 104 66.3
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 5.2e-34 147.9 122 54.9
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 2.0e-33 146.0 104 62.5
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 2.8e-32 142.1 97 64.9
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 6.3e-32 141.0 122 53.3
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 9.2e-31 137.1 89 75.3
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 5.9e-30 134.4 77 79.2
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 2.9e-29 132.1 94 69.1
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 6.6e-29 131.0 96 68.8
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.2e-27 126.7 138 45.7
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 3.6e-27 125.2 118 48.3
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 4.7e-27 124.8 132 49.2
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 8.0e-27 124.0 87 67.8
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 8.0e-27 124.0 79 70.9
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 1.4e-26 123.2 131 48.9
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 3.0e-26 122.1 105 51.4
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 3.4e-25 118.6 116 50.0
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 1.4e-23 113.2 113 48.7
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 7.8e-22 107.5 65 70.8
arahy.Tifrunner.gnm1.ann1.Y93F21 Arachis hypogaea HOM05D006897 ORTHO05D008825 8.6e-21 104.0 129 49.6
Peaxi162Scf00658g00012 Petunia axillaris HOM05D006897 ORTHO05D008825 7.3e-20 100.9 131 49.6
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.6e-17 92.4 63 63.5
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 3.5e-14 82.0 49 81.6
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 3.0e-13 79.0 58 69.0
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 3.9e-13 78.6 43 83.7
Nitab4.5_0003762g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 1.1e-12 77.0 62 61.3
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 3.6e-11 72.0 39 82.1


User provided reference genes

Program Settings