Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.05G136900 Manihot esculenta HOM05D007605 ORTHO05D009572 1.9e-26 121.7 61 100.0
Manes.08G010900 Manihot esculenta HOM05D007605 ORTHO05D009572 1.9e-26 121.7 61 100.0
Cpa.g.sc9.378 Carica papaya HOM05D007605 ORTHO05D009572 4.6e-20 100.5 59 83.1
CSS0027032 Camellia sinensis var. sinensis HOM05D007605 ORTHO05D009572 6.1e-20 100.1 57 84.2
CSS0028313 Camellia sinensis var. sinensis HOM05D007605 ORTHO05D009572 6.1e-20 100.1 57 84.2
Atru.chr4.1455 Acer truncatum HOM05D007605 ORTHO05D009572 3.9e-19 97.4 61 75.4
SGA_v2.0_scaffold25G11005 Striga asiatica HOM05D000384 ORTHO05D009572 3.9e-19 97.4 59 78.0
CANSAT01G0287 Cannabis sativa HOM05D007605 ORTHO05D009572 5.1e-19 97.1 60 78.3
CiPaw.01G168900 Carya illinoinensis HOM05D007605 ORTHO05D009572 6.7e-19 96.7 60 76.7
Ciclev10023247m.g Citrus clementina HOM05D007605 ORTHO05D009572 6.7e-19 96.7 61 75.4
Lj6g0006319 Lotus japonicus HOM05D007605 ORTHO05D009572 6.7e-19 96.7 59 78.0
Lj6g0016727 Lotus japonicus HOM05D007605 ORTHO05D009572 6.7e-19 96.7 59 78.0
Haze_00851 Corylus avellana HOM05D007605 ORTHO05D009572 8.7e-19 96.3 60 75.0
Lj1g0002800 Lotus japonicus HOM05D007605 ORTHO05D009572 8.7e-19 96.3 59 78.0
Lj1g0021920 Lotus japonicus HOM05D007605 ORTHO05D009572 8.7e-19 96.3 59 78.0
Cfa015674 Carpinus fangiana HOM05D007605 ORTHO05D009572 1.5e-18 95.5 60 75.0
MELO3C011854.2 Cucumis melo HOM05D007605 ORTHO05D009572 1.5e-18 95.5 60 73.3
PGR142G0642 Punica granatum HOM05D007605 ORTHO05D009572 1.5e-18 95.5 55 81.8
DCAR_030842 Daucus carota HOM05D007605 ORTHO05D009572 1.9e-18 95.1 59 76.3
RcHm_v2.0_Chr4g0405791 Rosa chinensis HOM05D007605 ORTHO05D009572 1.9e-18 95.1 60 75.0
Sed0018718 Sechium edule HOM05D007605 ORTHO05D009572 1.9e-18 95.1 60 75.0
VMungo1383G0010 Vigna mungo HOM05D003647 ORTHO05D004182 1.9e-18 95.1 59 76.3
Carub.0004s2631 Capsella rubella HOM05D007605 ORTHO05D009572 2.5e-18 94.7 55 81.8
Migut.N03059 Erythranthe guttata HOM05D007605 ORTHO05D009572 2.5e-18 94.7 55 80.0
Glyma.18G297600 Glycine max HOM05D007605 ORTHO05D009572 2.5e-18 94.7 59 76.3
Potri.019G096500 Populus trichocarpa HOM05D007605 ORTHO05D009572 2.5e-18 94.7 55 81.8
Potri.019G096700 Populus trichocarpa HOM05D007605 ORTHO05D009572 2.5e-18 94.7 55 81.8
Sc13g0006890 Simmondsia chinensis HOM05D007605 ORTHO05D009572 2.5e-18 94.7 60 76.7
TWI63G1406 Tripterygium wilfordii HOM05D007605 ORTHO05D009572 2.5e-18 94.7 60 78.3
FAN05G0946 Fragaria x ananassa HOM05D007605 ORTHO05D009572 3.3e-18 94.4 60 75.0
FAN05G3507 Fragaria x ananassa HOM05D007605 ORTHO05D009572 3.3e-18 94.4 60 75.0
SalBow6G4154 Salvia bowleyana HOM05D007605 ORTHO05D009572 3.3e-18 94.4 59 78.0
Lalb_Chr04g0257371 Lupinus albus HOM05D007605 ORTHO05D009572 4.3e-18 94.0 57 80.7
Sabra19G0108500 Salix brachista HOM05D000005 ORTHO05D000012 4.3e-18 94.0 55 81.8
Thecc.04G164300 Theobroma cacao HOM05D007605 ORTHO05D009572 4.3e-18 94.0 60 78.3
Nn1g09550 Nelumbo nucifera HOM05D007605 ORTHO05D009572 5.7e-18 93.6 60 75.0
Glyma.08G364500 Glycine max HOM05D007605 ORTHO05D009572 7.4e-18 93.2 57 77.2
RcHm_v2.0_Chr7g0232231 Rosa chinensis HOM05D007605 ORTHO05D009572 7.4e-18 93.2 60 73.3
THA.LOC104802329 Tarenaya hassleriana HOM05D007605 ORTHO05D009572 7.4e-18 93.2 60 78.3
AL4G42650 Arabidopsis lyrata HOM05D007605 ORTHO05D009572 9.7e-18 92.8 55 81.8
arahy.Tifrunner.gnm1.ann1.FBG7WK Arachis hypogaea HOM05D007605 ORTHO05D009572 9.7e-18 92.8 59 74.6
arahy.Tifrunner.gnm1.ann1.MPL0H7 Arachis hypogaea HOM05D007605 ORTHO05D009572 9.7e-18 92.8 59 74.6
Ca_08431_v3 Cicer arietinum L. HOM05D007605 ORTHO05D009572 9.7e-18 92.8 59 71.2
Ca_14651_v3 Cicer arietinum L. HOM05D007605 ORTHO05D009572 9.7e-18 92.8 59 71.2
FvH4_6g21131 Fragaria vesca HOM05D007605 ORTHO05D009572 9.7e-18 92.8 60 73.3
FAN14G0446 Fragaria x ananassa HOM05D007605 ORTHO05D009572 9.7e-18 92.8 60 73.3
Sabra13G0106700 Salix brachista HOM05D007605 ORTHO05D009572 9.7e-18 92.8 55 80.0
AT2G43780 Arabidopsis thaliana HOM05D007605 ORTHO05D009572 1.3e-17 92.4 55 81.8
Duzib212G0337 Durio zibethinus HOM05D007605 ORTHO05D009572 1.3e-17 92.4 60 76.7
Medtr7g091060 Medicago truncatula HOM05D007605 ORTHO05D009572 1.3e-17 92.4 59 71.2
Phvul.008G005000 Phaseolus vulgaris HOM05D007605 ORTHO05D009572 1.3e-17 92.4 59 74.6
Prupe.4G204500 Prunus persica HOM05D007605 ORTHO05D009572 1.3e-17 92.4 60 71.7
Eucgr.H04449 Eucalyptus grandis HOM05D007605 ORTHO05D009572 1.6e-17 92.0 61 75.4
MD03G1210800 Malus domestica HOM05D007605 ORTHO05D009572 1.6e-17 92.0 60 71.7
COL.COLO4_38114 Corchorus olitorius HOM05D007605 ORTHO05D009572 2.8e-17 91.3 60 75.0
MD11G1225700 Malus domestica HOM05D007605 ORTHO05D009572 2.8e-17 91.3 60 73.3
Rhsim09G0008600 Rhododendron simsii HOM05D007605 ORTHO05D009572 2.8e-17 91.3 54 79.6
TPR.G18242 Trifolium pratense HOM05D007605 ORTHO05D009572 2.8e-17 91.3 56 75.0
Atru.chr12.2308 Acer truncatum HOM05D007605 ORTHO05D009572 6.3e-17 90.1 61 73.8
Ah.07g202920 Amaranthus hybridus HOM05D007605 ORTHO05D009572 8.2e-17 89.7 55 80.0
Glyma.19G073500 Glycine max HOM05D007605 ORTHO05D009572 8.2e-17 89.7 57 73.7
MBI07_g11492_MAGBIO Magnolia biondii HOM05D007605 ORTHO05D009572 1.1e-16 89.4 59 74.6
Aa31LG1G25490 Aethionema arabicum HOM05D005323 ORTHO05D006820 1.4e-16 89.0 55 78.2
Os12g0611700 Oryza sativa ssp. japonica HOM05D007605 ORTHO05D009572 1.4e-16 89.0 52 80.8
AUR62002411 Chenopodium quinoa HOM05D007605 ORTHO05D009572 1.8e-16 88.6 60 70.0
Peaxi162Scf00579g00018 Petunia axillaris HOM05D007605 ORTHO05D009572 1.8e-16 88.6 60 70.0
Gohir.A10G144600 Gossypium hirsutum HOM05D007605 ORTHO05D009572 2.4e-16 88.2 58 70.7
Lsat_1_v5_gn_1_21060 Lactuca sativa HOM05D007605 ORTHO05D009572 2.4e-16 88.2 52 80.8
Psat3g074320 Pisum sativum HOM05D007605 ORTHO05D009572 2.4e-16 88.2 59 67.8
CARHR138960 Cardamine hirsuta HOM05D007605 ORTHO05D009572 3.1e-16 87.8 55 78.2
Sp4g25850 Schrenkiella parvula HOM05D007605 ORTHO05D009572 4.1e-16 87.4 55 76.4
Sopen06g018580 Solanum pennellii HOM05D007605 ORTHO05D009572 4.1e-16 87.4 60 70.0
BcaB01g03362 Brassica carinata HOM05D007605 ORTHO05D009572 9.0e-16 86.3 55 76.4
Nitab4.5_0007474g0060 Nicotiana tabacum HOM05D007605 ORTHO05D009572 1.2e-15 85.9 60 68.3
BcaC01g05214 Brassica carinata HOM05D007605 ORTHO05D009572 1.5e-15 85.5 55 74.5
BcaC02g12364 Brassica carinata HOM05D005323 ORTHO05D006820 1.5e-15 85.5 55 74.5
C03p29150 Brassica napus HOM05D007605 ORTHO05D009572 1.5e-15 85.5 55 74.5
C04p04730 Brassica napus HOM05D005323 ORTHO05D006820 1.5e-15 85.5 55 74.5
BolC3t15267H Brassica oleracea HOM05D007605 ORTHO05D009572 1.5e-15 85.5 55 74.5
BolC4t22103H Brassica oleracea HOM05D005323 ORTHO05D006820 1.5e-15 85.5 55 74.5
BcaB02g08902 Brassica carinata HOM05D005323 ORTHO05D006820 2.0e-15 85.1 55 74.5
A03p24460 Brassica napus HOM05D007605 ORTHO05D009572 2.0e-15 85.1 55 74.5
A05p03980 Brassica napus HOM05D005323 ORTHO05D006820 2.0e-15 85.1 55 72.7
BraA03t11655Z Brassica rapa HOM05D007605 ORTHO05D009572 2.0e-15 85.1 55 74.5
ECA248G2718 Erigeron canadensis HOM05D007605 ORTHO05D009572 2.0e-15 85.1 50 80.0
Nitab4.5_0004700g0030 Nicotiana tabacum HOM05D001130 ORTHO05D001052 2.0e-15 85.1 60 68.3
PGSC0003DMG400016297 Solanum tuberosum HOM05D007605 ORTHO05D009572 2.0e-15 85.1 60 68.3
Aqoxy4G02871 Aquilegia oxysepala HOM05D007605 ORTHO05D009572 2.6e-15 84.7 47 85.1
EL10Ac3g06103 Beta vulgaris HOM05D007605 ORTHO05D009572 2.6e-15 84.7 60 68.3
Os05g0103800 Oryza sativa ssp. japonica HOM05D007605 ORTHO05D009572 2.6e-15 84.7 55 78.2
PSO573G0041 Papaver somniferum HOM05D007605 ORTHO05D009572 2.6e-15 84.7 59 71.2
BcaB05g23281 Brassica carinata HOM05D007605 ORTHO05D009572 3.4e-15 84.3 55 72.7
Thhalv10001711m.g Eutrema salsugineum HOM05D007605 ORTHO05D009572 3.4e-15 84.3 55 74.5
BraA05t19386Z Brassica rapa HOM05D005323 ORTHO05D006820 4.5e-15 84.0 55 72.7
ClCG11G013540 Citrullus lanatus HOM05D007605 ORTHO05D009572 1.0e-14 82.8 50 78.0
Gohir.D10G122400 Gossypium hirsutum HOM05D007605 ORTHO05D009572 1.7e-14 82.0 59 67.8
Gorai.011G134700 Gossypium raimondii HOM05D007605 ORTHO05D009572 1.7e-14 82.0 59 67.8
ATR0743G065 Amborella trichopoda HOM05D007605 ORTHO05D009572 2.9e-14 81.3 55 67.3
QL10p056550 Quercus lobata HOM05D007605 ORTHO05D009572 1.1e-13 79.3 52 76.9
Glyma.19G030600 Glycine max HOM05D007605 ORTHO05D009572 1.4e-13 79.0 57 71.9
CsaV3_5G030160 Cucumis sativus L. HOM05D007605 ORTHO05D009572 9.4e-13 76.3 46 76.1
Glyma.17G205632 Glycine max HOM05D007605 ORTHO05D009572 1.2e-12 75.9 61 60.7
GSVIVG01038176001 Vitis vinifera HOM05D007605 ORTHO05D009572 1.6e-12 75.5 56 67.9
Lj6C218G0 Lonicera japonica HOM05D000384 ORTHO05D000468 4.6e-12 73.9 42 81.0
Lsat_1_v5_gn_1_74540 Lactuca sativa HOM05D007605 ORTHO05D009572 2.3e-11 71.6 47 70.2
vmacro23387 Vaccinium macrocarpon HOM05D007605 ORTHO05D009572 5.1e-11 70.5 39 84.6
Mapoly0044s0040 Marchantia polymorpha HOM05D007605 ORTHO05D009572 1.4e-08 62.4 44 68.2
BcaC05g29066 Brassica carinata HOM05D007605 ORTHO05D009572 1.8e-08 62.0 46 63.0
Pp3c9_12740 Physcomitrium patens HOM05D007605 ORTHO05D009572 4.5e-07 57.4 55 58.2


User provided reference genes

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