Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 3.5e-57 224.6 99 100.0
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 5.0e-48 194.1 99 83.8
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 6.5e-48 193.7 99 83.8
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 7.2e-47 190.3 100 83.0
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 3.6e-46 188.0 99 80.8
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 4.7e-46 187.6 100 82.0
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 4.7e-46 187.6 100 82.0
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 4.7e-46 187.6 100 82.0
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 8.0e-46 186.8 100 82.0
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 1.4e-45 186.0 100 81.0
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 1.8e-45 185.7 100 81.0
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 3.0e-45 184.9 100 81.0
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 1.2e-44 183.0 100 79.0
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 2.6e-44 181.8 99 76.8
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 4.4e-44 181.0 100 79.0
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 5.7e-44 180.6 99 75.8
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 7.5e-44 180.3 100 77.0
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 1.3e-43 179.5 99 75.8
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 1.3e-43 179.5 100 78.0
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 1.7e-43 179.1 98 78.6
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 1.7e-43 179.1 100 78.0
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 2.2e-43 178.7 99 75.8
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 2.2e-43 178.7 99 73.7
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 2.2e-43 178.7 99 73.7
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 2.2e-43 178.7 99 77.8
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 2.2e-43 178.7 100 77.0
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 2.8e-43 178.3 99 75.8
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 2.8e-43 178.3 100 78.0
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 2.8e-43 178.3 100 79.0
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 2.8e-43 178.3 100 79.0
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 2.8e-43 178.3 99 76.8
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 3.7e-43 177.9 99 76.8
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 4.8e-43 177.6 99 73.7
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 4.8e-43 177.6 100 78.0
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 4.8e-43 177.6 100 77.0
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 8.3e-43 176.8 100 75.0
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 1.1e-42 176.4 99 75.8
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 1.4e-42 176.0 99 75.8
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 1.8e-42 175.6 99 75.8
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 1.8e-42 175.6 99 75.8
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 1.8e-42 175.6 100 75.0
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 1.8e-42 175.6 100 75.0
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 1.8e-42 175.6 100 75.0
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 1.8e-42 175.6 100 75.0
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 2.4e-42 175.3 99 73.7
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 2.4e-42 175.3 98 77.6
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 2.4e-42 175.3 100 74.0
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 3.1e-42 174.9 100 77.0
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 3.1e-42 174.9 99 74.7
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 3.1e-42 174.9 100 74.0
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 4.1e-42 174.5 98 77.6
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 5.4e-42 174.1 100 74.0
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 5.4e-42 174.1 95 76.8
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 7.0e-42 173.7 99 74.7
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 7.0e-42 173.7 99 74.7
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 7.0e-42 173.7 99 74.7
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 7.0e-42 173.7 99 74.7
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 7.0e-42 173.7 99 74.7
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 7.0e-42 173.7 100 75.0
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 9.1e-42 173.3 98 75.5
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 9.1e-42 173.3 100 74.0
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 2.0e-41 172.2 100 76.0
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 2.0e-41 172.2 100 73.0
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 2.0e-41 172.2 100 74.0
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 3.5e-41 171.4 97 72.2
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 5.9e-41 170.6 99 72.7
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 5.9e-41 170.6 99 71.7
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 1.3e-40 169.5 99 72.7
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 1.3e-40 169.5 99 72.7
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 2.3e-40 168.7 97 73.2
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 2.3e-40 168.7 99 71.7
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 8.6e-40 166.8 100 72.0
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 1.1e-39 166.4 100 71.0
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 1.2e-38 162.9 100 70.0
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 1.6e-38 162.5 100 70.0
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 6.1e-38 160.6 88 80.7
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 6.1e-38 160.6 100 69.0
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 1.8e-37 159.1 98 69.4
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 2.3e-37 158.7 98 68.4
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 1.7e-35 152.5 85 77.6
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 4.9e-35 151.0 134 56.0
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 2.4e-34 148.7 110 60.9
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 3.1e-34 148.3 98 64.3
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 5.4e-34 147.5 99 60.6
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 7.0e-34 147.1 99 60.6
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 7.8e-33 143.7 87 69.0
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 1.3e-32 142.9 100 66.0
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 1.3e-32 142.9 100 66.0
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 1.1e-31 139.8 98 61.2
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 1.9e-31 139.0 169 42.6
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 5.6e-31 137.5 99 60.6
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 5.7e-28 127.5 99 55.6
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 8.3e-27 123.6 70 74.3
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 1.0e-24 116.7 101 54.5
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 4.0e-21 104.8 101 51.5
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 9.8e-20 100.1 102 52.0
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 2.9e-19 98.6 58 74.1
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 1.6e-17 92.8 100 47.0
Nn2g15280 Nelumbo nucifera HOM05D007373 ORTHO05D009192 6.4e-11 70.9 40 72.5
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 1.9e-10 69.3 37 78.4
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 1.6e-09 66.2 31 87.1


User provided reference genes

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