Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G004500 Manihot esculenta HOM05D007569 ORTHO05D009268 6.6e-41 170.2 84 100.0
Manes.09G078021 Manihot esculenta HOM05D007569 ORTHO05D009268 6.2e-23 110.5 85 70.6
Sabra16G0093200 Salix brachista HOM05D007569 ORTHO05D009268 4.4e-21 104.4 91 60.4
Potri.016G087000 Populus trichocarpa HOM05D007569 ORTHO05D009268 9.9e-21 103.2 90 58.9
Potri.006G130400 Populus trichocarpa HOM05D007569 ORTHO05D009268 6.6e-17 90.5 90 54.4
Dinv35729 Davidia involucrata HOM05D007569 ORTHO05D009268 2.8e-15 85.1 92 57.6
CiPaw.10G136400 Carya illinoinensis HOM05D007569 ORTHO05D009268 3.6e-15 84.7 91 53.8
CiPaw.10G136600 Carya illinoinensis HOM05D007569 ORTHO05D009268 4.7e-15 84.3 91 53.8
Haze_20627 Corylus avellana HOM05D007569 ORTHO05D009268 2.6e-13 78.6 87 55.2
QL07p045078 Quercus lobata HOM05D007569 ORTHO05D009268 9.9e-13 76.6 89 50.6
Ciclev10013224m.g Citrus clementina HOM05D007569 ORTHO05D009268 1.3e-12 76.3 88 53.4
GSVIVG01025645001 Vitis vinifera HOM05D007569 ORTHO05D009268 6.4e-12 73.9 85 54.1
CiPaw.09G178900 Carya illinoinensis HOM05D007569 ORTHO05D009268 1.4e-11 72.8 95 50.5
Sabra06G0102400 Salix brachista HOM05D007569 ORTHO05D009268 1.9e-11 72.4 92 52.2
Prupe.6G240500 Prunus persica HOM05D007569 ORTHO05D009268 2.4e-11 72.0 91 47.3
Actinidia19698 Actinidia chinensis HOM05D007569 ORTHO05D009268 3.2e-11 71.6 91 51.6
RhsimUnG0115600 Rhododendron simsii HOM05D007569 ORTHO05D009268 5.4e-11 70.9 86 50.0
Medtr7g100860 Medicago truncatula HOM05D007569 ORTHO05D009268 9.2e-11 70.1 87 47.1
Duzib093G0005 Durio zibethinus HOM05D007569 ORTHO05D009268 2.7e-10 68.6 89 52.8
TWI74G0066 Tripterygium wilfordii HOM05D007569 ORTHO05D009268 3.5e-10 68.2 87 54.0
Thecc.05G055900 Theobroma cacao HOM05D007569 ORTHO05D009268 6.0e-10 67.4 86 50.0
CANSAT80G1933 Cannabis sativa HOM05D007569 ORTHO05D009268 3.0e-09 65.1 81 46.9
Lsat_1_v5_gn_6_30260 Lactuca sativa HOM05D007569 ORTHO05D009268 3.9e-09 64.7 99 48.5
CSS0032625 Camellia sinensis var. sinensis HOM05D007569 ORTHO05D009268 1.1e-08 63.2 94 47.9
A03p01020 Brassica napus HOM05D007569 ORTHO05D009268 1.5e-08 62.8 74 48.6
BraA03t09483Z Brassica rapa HOM05D007569 ORTHO05D009268 1.5e-08 62.8 74 48.6
TAR623G1008 Trochodendron aralioides HOM05D007569 ORTHO05D009268 1.9e-08 62.4 82 51.2
Cc06_g03690 Coffea canephora HOM05D007569 ORTHO05D009268 2.5e-08 62.0 88 47.7
Glyma.13G138100 Glycine max HOM05D007569 ORTHO05D009268 3.3e-08 61.6 99 40.4
Gohir.A01G216400 Gossypium hirsutum HOM05D007569 ORTHO05D009268 3.3e-08 61.6 88 44.3
AT5G03120 Arabidopsis thaliana HOM05D007569 ORTHO05D009268 4.3e-08 61.2 78 44.9
Glyma.10G050600 Glycine max HOM05D007569 ORTHO05D009268 4.3e-08 61.2 88 42.0
Nitab4.5_0003871g0030 Nicotiana tabacum HOM05D007569 ORTHO05D009268 4.3e-08 61.2 92 46.7
Lj5g0021553 Lotus japonicus HOM05D007569 ORTHO05D009268 5.6e-08 60.8 86 48.8
Lalb_Chr01g0018971 Lupinus albus HOM05D007569 ORTHO05D009268 9.6e-08 60.1 88 46.6
Medtr1g066720 Medicago truncatula HOM05D007569 ORTHO05D009268 9.6e-08 60.1 60 51.7
Gohir.A13G025100 Gossypium hirsutum HOM05D007569 ORTHO05D009268 1.2e-07 59.7 84 41.7
TPR.G28044 Trifolium pratense HOM05D007569 ORTHO05D009268 1.2e-07 59.7 92 41.3
AL6G12400 Arabidopsis lyrata HOM05D007569 ORTHO05D009268 1.6e-07 59.3 73 43.8
COL.COLO4_27060 Corchorus olitorius HOM05D007569 ORTHO05D009268 1.6e-07 59.3 88 46.6
MD04G1102400 Malus domestica HOM05D007569 ORTHO05D009268 1.6e-07 59.3 85 41.2
Gorai.002G249500 Gossypium raimondii HOM05D007569 ORTHO05D009268 2.1e-07 58.9 88 42.0
Gohir.D13G023800 Gossypium hirsutum HOM05D007569 ORTHO05D009268 2.8e-07 58.5 79 48.1
Peaxi162Scf00005g00394 Petunia axillaris HOM05D007569 ORTHO05D009268 2.8e-07 58.5 93 41.9
EL10Ac7g16512 Beta vulgaris HOM05D007569 ORTHO05D009268 3.6e-07 58.2 75 40.0
BcaC03g13030 Brassica carinata HOM05D007569 ORTHO05D009268 3.6e-07 58.2 65 53.8
C02p00800 Brassica napus HOM05D004310 ORTHO05D009268 3.6e-07 58.2 65 53.8
BraA02t04745Z Brassica rapa HOM05D007569 ORTHO05D009268 3.6e-07 58.2 65 53.8
Gorai.013G026900 Gossypium raimondii HOM05D007569 ORTHO05D009268 4.7e-07 57.8 78 44.9
Nitab4.5_0006156g0030 Nicotiana tabacum HOM05D007569 ORTHO05D009268 4.7e-07 57.8 93 39.8
PGSC0003DMG400001743 Solanum tuberosum HOM05D007569 ORTHO05D009268 4.7e-07 57.8 89 46.1
Psat3g044160 Pisum sativum HOM05D007569 ORTHO05D009268 6.2e-07 57.4 59 49.2
Migut.L01668 Erythranthe guttata HOM05D007569 ORTHO05D009268 8.1e-07 57.0 86 46.5
Sp6g39590 Schrenkiella parvula HOM05D007569 ORTHO05D009268 8.1e-07 57.0 60 53.3
Nitab4.5_0008568g0070 Nicotiana tabacum HOM05D007569 ORTHO05D009268 1.1e-06 56.6 77 46.8
Psat6g070160 Pisum sativum HOM05D007569 ORTHO05D009268 1.1e-06 56.6 91 42.9
Actinidia05265 Actinidia chinensis HOM05D007569 ORTHO05D009268 1.4e-06 56.2 90 41.1
arahy.Tifrunner.gnm1.ann1.PY3JPZ Arachis hypogaea HOM05D007569 ORTHO05D009268 1.4e-06 56.2 91 42.9
FvH4_6g15530 Fragaria vesca HOM05D007569 ORTHO05D009268 1.4e-06 56.2 93 44.1
FAN14G4266 Fragaria x ananassa HOM05D007569 ORTHO05D009268 1.4e-06 56.2 93 44.1
Lalb_Chr25g0289201 Lupinus albus HOM05D007569 ORTHO05D009268 1.4e-06 56.2 52 61.5
Phvul.007G107600 Phaseolus vulgaris HOM05D007569 ORTHO05D009268 1.4e-06 56.2 97 44.3
RcHm_v2.0_Chr3g0469031 Rosa chinensis HOM05D007569 ORTHO05D009268 1.8e-06 55.8 62 58.1
BcaB01g05860 Brassica carinata HOM05D007569 ORTHO05D009268 2.4e-06 55.5 75 44.0
BcaB05g21850 Brassica carinata HOM05D007569 ORTHO05D009268 2.4e-06 55.5 75 45.3
C03p01310 Brassica napus HOM05D007569 ORTHO05D009268 2.4e-06 55.5 75 44.0
BolC3t12690H Brassica oleracea HOM05D007569 ORTHO05D009268 2.4e-06 55.5 75 44.0
Nitab4.5_0000669g0110 Nicotiana tabacum HOM05D007569 ORTHO05D009268 2.4e-06 55.5 95 41.1
BolC2t06078H Brassica oleracea HOM05D004310 ORTHO05D009268 3.1e-06 55.1 74 47.3
Cpa.g.sc368.3 Carica papaya HOM05D007569 ORTHO05D009268 3.1e-06 55.1 63 55.6
Thhalv10015759m.g Eutrema salsugineum HOM05D007569 ORTHO05D009268 3.1e-06 55.1 60 53.3
Oeu026850.1 Olea europaea HOM05D007569 ORTHO05D009268 3.1e-06 55.1 95 43.2
ECA248G1179 Erigeron canadensis HOM05D007569 ORTHO05D009268 4.0e-06 54.7 84 41.7
Peaxi162Scf00472g00312 Petunia axillaris HOM05D007569 ORTHO05D009268 4.0e-06 54.7 93 41.9
PGR004G0018 Punica granatum HOM05D007569 ORTHO05D009268 4.0e-06 54.7 96 38.5
Aqoxy4G03229 Aquilegia oxysepala HOM05D007569 ORTHO05D009268 5.2e-06 54.3 75 42.7
Gohir.D01G205200 Gossypium hirsutum HOM05D007569 ORTHO05D009268 5.2e-06 54.3 88 39.8
Lsat_1_v5_gn_1_54200 Lactuca sativa HOM05D007569 ORTHO05D009268 5.2e-06 54.3 64 46.9
arahy.Tifrunner.gnm1.ann1.4H2E4D Arachis hypogaea HOM05D007569 ORTHO05D009268 6.9e-06 53.9 69 47.8
Carub.0006s0192 Capsella rubella HOM05D007569 ORTHO05D009268 6.9e-06 53.9 64 46.9


User provided reference genes

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