Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G004101 Manihot esculenta HOM05D005542 ORTHO05D006708 8.9e-119 430.3 212 100.0
Manes.08G004113 Manihot esculenta HOM05D005542 ORTHO05D006708 8.9e-119 430.3 212 100.0
Manes.08G004123 Manihot esculenta HOM05D005542 ORTHO05D006708 8.9e-119 430.3 212 100.0
Manes.08G004124 Manihot esculenta HOM05D005542 ORTHO05D006708 8.9e-119 430.3 212 100.0
Manes.08G004129 Manihot esculenta HOM05D005542 ORTHO05D006708 8.9e-119 430.3 212 100.0
Manes.08G004100 Manihot esculenta HOM05D005542 ORTHO05D006708 4.1e-116 421.4 224 94.6
Potri.006G130700 Populus trichocarpa HOM05D005542 ORTHO05D006708 5.4e-92 341.3 221 76.9
Sed0012482 Sechium edule HOM05D005542 ORTHO05D006708 7.8e-91 337.4 224 76.3
TAR623G0063 Trochodendron aralioides HOM05D005542 ORTHO05D006708 8.7e-90 334.0 219 75.8
Cfa017517 Carpinus fangiana HOM05D005542 ORTHO05D006708 4.3e-89 331.6 219 75.8
MD12G1123000 Malus domestica HOM05D005542 ORTHO05D006708 9.6e-89 330.5 217 75.1
CANSAT80G0049 Cannabis sativa HOM05D005542 ORTHO05D006708 3.6e-88 328.6 211 75.8
Sabra06G0102700 Salix brachista HOM05D005542 ORTHO05D006708 6.2e-88 327.8 221 73.8
Prupe.6G240200 Prunus persica HOM05D005542 ORTHO05D006708 8.1e-88 327.4 220 74.1
Dinv37264 Davidia involucrata HOM05D005542 ORTHO05D006708 3.1e-87 325.5 218 73.9
Sed0011219 Sechium edule HOM05D005542 ORTHO05D006708 3.1e-87 325.5 224 73.7
Gorai.001G248000 Gossypium raimondii HOM05D005542 ORTHO05D006708 5.3e-87 324.7 216 76.9
Lj3P980T19 Lonicera japonica HOM05D005542 ORTHO05D006708 2.6e-86 322.4 220 72.7
Haze_20632 Corylus avellana HOM05D005542 ORTHO05D006708 3.4e-86 322.0 218 74.3
Dinv35725 Davidia involucrata HOM05D005542 ORTHO05D006708 1.3e-85 320.1 221 72.4
Sabra16G0093000 Salix brachista HOM05D005542 ORTHO05D006708 1.3e-85 320.1 219 73.1
FAN14G1906 Fragaria x ananassa HOM05D005542 ORTHO05D006708 1.7e-85 319.7 216 72.2
THA.LOC104823241 Tarenaya hassleriana HOM05D005542 ORTHO05D006708 1.7e-85 319.7 222 72.1
RcHm_v2.0_Chr3g0468971 Rosa chinensis HOM05D005542 ORTHO05D006708 3.8e-85 318.5 219 73.5
Aqoxy4G03224 Aquilegia oxysepala HOM05D005542 ORTHO05D006708 4.9e-85 318.2 212 74.1
FvH4_6g15490 Fragaria vesca HOM05D005542 ORTHO05D006708 4.9e-85 318.2 216 72.2
FAN09G2765 Fragaria x ananassa HOM05D005542 ORTHO05D006708 4.9e-85 318.2 216 72.2
CAN.G1676.11 Capsicum annuum HOM05D005542 ORTHO05D006708 8.4e-85 317.4 221 75.1
Cfa017518 Carpinus fangiana HOM05D005542 ORTHO05D006708 1.1e-84 317.0 219 73.1
MSTRG.10302 Avicennia marina HOM05D005542 ORTHO05D006708 3.2e-84 315.5 217 75.1
FAN02G2564 Fragaria x ananassa HOM05D005542 ORTHO05D006708 3.2e-84 315.5 216 72.2
FAN05G5506 Fragaria x ananassa HOM05D005542 ORTHO05D006708 4.2e-84 315.1 216 71.8
Cc06_g03660 Coffea canephora HOM05D005542 ORTHO05D006708 9.3e-84 313.9 217 74.2
Potri.016G086700 Populus trichocarpa HOM05D005542 ORTHO05D006708 1.6e-83 313.2 219 72.1
MSTRG.19142 Avicennia marina HOM05D005542 ORTHO05D006708 2.1e-83 312.8 217 72.8
Hma1.2p1_0350F.1_g132800 Hydrangea macrophylla HOM05D005542 ORTHO05D006708 2.1e-83 312.8 218 71.1
HanXRQChr13g0399571 Helianthus annuus HOM05D005542 ORTHO05D006708 3.5e-83 312.0 215 73.0
Psat6g070280 Pisum sativum HOM05D005542 ORTHO05D006708 4.6e-83 311.6 213 72.8
Hma1.2p1_0111F.1_g053980 Hydrangea macrophylla HOM05D005542 ORTHO05D006708 7.9e-83 310.8 212 74.1
MBI15_g16380_MAGBIO Magnolia biondii HOM05D005542 ORTHO05D006708 1.0e-82 310.5 218 72.0
TPR.G30255 Trifolium pratense HOM05D005542 ORTHO05D006708 1.0e-82 310.5 208 74.0
Migut.L01666 Erythranthe guttata HOM05D005542 ORTHO05D006708 1.3e-82 310.1 216 72.2
VMungo1309G1614 Vigna mungo HOM05D005542 ORTHO05D006708 1.7e-82 309.7 214 72.0
Lsat_1_v5_gn_6_30080 Lactuca sativa HOM05D005542 ORTHO05D006708 4.3e-81 305.1 215 73.5
TAR369G0130 Trochodendron aralioides HOM05D005542 ORTHO05D006708 5.6e-81 304.7 218 68.3
AL6G12370 Arabidopsis lyrata HOM05D005542 ORTHO05D006708 7.3e-81 304.3 213 71.4
PGR142G2113 Punica granatum HOM05D005542 ORTHO05D006708 1.3e-80 303.5 223 68.2
SGA_v2.0_scaffold94G28671 Striga asiatica HOM05D005542 ORTHO05D006708 1.3e-80 303.5 217 71.9
Medtr1g066770 Medicago truncatula HOM05D005542 ORTHO05D006708 1.6e-80 303.1 212 70.8
Carub.0006s0187 Capsella rubella HOM05D005542 ORTHO05D006708 2.8e-80 302.4 213 71.8
AUR62040036 Chenopodium quinoa HOM05D005542 ORTHO05D006708 1.1e-79 300.4 220 67.7
AT5G03080 Arabidopsis thaliana HOM05D005542 ORTHO05D006708 1.4e-79 300.1 213 71.4
Cpa.g.sc174.15 Carica papaya HOM05D005542 ORTHO05D006708 1.8e-79 299.7 225 68.0
Lj5g0010386 Lotus japonicus HOM05D005542 ORTHO05D006708 2.4e-79 299.3 216 70.4
AUR62042543 Chenopodium quinoa HOM05D005542 ORTHO05D006708 3.1e-79 298.9 220 67.3
Lsat_1_v5_gn_1_54060 Lactuca sativa HOM05D005542 ORTHO05D006708 4.0e-79 298.5 215 69.8
BcaC06g32035 Brassica carinata HOM05D005542 ORTHO05D006708 6.9e-79 297.7 213 69.0
BolC9t60101H Brassica oleracea HOM05D005542 ORTHO05D006708 6.9e-79 297.7 213 69.0
THA.LOC104816326 Tarenaya hassleriana HOM05D005542 ORTHO05D006708 6.9e-79 297.7 219 68.9
Ah.01g009250 Amaranthus hybridus HOM05D005542 ORTHO05D006708 9.0e-79 297.4 209 69.9
BcaB05g21852 Brassica carinata HOM05D005542 ORTHO05D006708 2.0e-78 296.2 212 69.8
C09p73660 Brassica napus HOM05D005542 ORTHO05D006708 2.0e-78 296.2 213 69.0
Thhalv10014320m.g Eutrema salsugineum HOM05D005542 ORTHO05D006708 3.4e-78 295.4 218 68.3
BraA02t04743Z Brassica rapa HOM05D005542 ORTHO05D006708 1.3e-77 293.5 212 68.9
BcaC03g13032 Brassica carinata HOM05D005542 ORTHO05D006708 2.2e-77 292.7 211 68.7
C02p00780 Brassica napus HOM05D005542 ORTHO05D006708 2.9e-77 292.4 212 68.4
BolC2t06076H Brassica oleracea HOM05D005542 ORTHO05D006708 2.9e-77 292.4 212 68.4
HPP92_012051 Vanilla planifolia HOM05D005542 ORTHO05D006708 1.4e-76 290.0 217 68.7
CARHR210250 Cardamine hirsuta HOM05D005542 ORTHO05D006708 1.9e-76 289.7 219 67.6
DCAR_009281 Daucus carota HOM05D005542 ORTHO05D006708 5.4e-76 288.1 218 67.0
MD04G1105500 Malus domestica HOM05D005542 ORTHO05D006708 1.6e-75 286.6 210 68.6
Duzib128G1803 Durio zibethinus HOM05D005542 ORTHO05D006708 2.7e-75 285.8 222 68.9
Thecc.05G055500 Theobroma cacao HOM05D005542 ORTHO05D006708 7.9e-75 284.3 222 68.0
Sc02g0001930 Simmondsia chinensis HOM05D005542 ORTHO05D006708 2.3e-74 282.7 215 66.0
SalBow3G3282 Salvia bowleyana HOM05D005542 ORTHO05D006708 1.9e-73 279.6 218 67.4
SalBow3G3389 Salvia bowleyana HOM05D005542 ORTHO05D006708 1.9e-73 279.6 218 67.4
BcaNung06917 Brassica carinata HOM05D005542 ORTHO05D006708 5.6e-73 278.1 200 70.0
Zm00001eb013250 Zea mays HOM05D005542 ORTHO05D006708 5.6e-73 278.1 210 66.2
Nn2g10693 Nelumbo nucifera HOM05D005542 ORTHO05D006708 7.4e-73 277.7 218 64.7
Aa31LG1G21960 Aethionema arabicum HOM05D005542 ORTHO05D006708 1.6e-72 276.6 212 67.5
Ciclev10012685m.g Citrus clementina HOM05D005542 ORTHO05D006708 2.1e-72 276.2 211 67.8
Eucgr.K03216 Eucalyptus grandis HOM05D005542 ORTHO05D006708 2.8e-72 275.8 220 64.5
unitig_26.g9217 Utricularia gibba HOM05D005542 ORTHO05D006708 2.8e-72 275.8 205 68.3
SHI12539 Sapria himalayana HOM05D005542 ORTHO05D006708 6.2e-72 274.6 217 66.8
Os03g0288700 Oryza sativa ssp. japonica HOM05D005542 ORTHO05D006708 8.1e-72 274.2 210 66.2
MELO3C014679.2 Cucumis melo HOM05D005542 ORTHO05D006708 1.1e-71 273.9 219 66.2
Sopen09g002330 Solanum pennellii HOM05D005542 ORTHO05D006708 1.4e-71 273.5 221 66.5
Nn2g10694 Nelumbo nucifera HOM05D005542 ORTHO05D006708 1.8e-71 273.1 219 64.4
ClCG02G023990 Citrullus lanatus HOM05D005542 ORTHO05D006708 5.3e-71 271.6 216 66.2
QL07p045114 Quercus lobata HOM05D005542 ORTHO05D006708 1.2e-70 270.4 219 63.9
CSS0028203 Camellia sinensis var. sinensis HOM05D005542 ORTHO05D006708 2.0e-70 269.6 218 64.7
CsaV3_4G023360 Cucumis sativus L. HOM05D005542 ORTHO05D006708 2.0e-70 269.6 219 65.8
Gohir.D13G095800 Gossypium hirsutum HOM05D005542 ORTHO05D006708 2.0e-70 269.6 216 66.7
CSS0011727 Camellia sinensis var. sinensis HOM05D005542 ORTHO05D006708 5.8e-70 268.1 218 64.2
CiPaw.09G179200 Carya illinoinensis HOM05D005542 ORTHO05D006708 5.8e-70 268.1 219 64.8
ATR0314G039 Amborella trichopoda HOM05D005542 ORTHO05D006708 1.0e-69 267.3 215 64.2
Oeu060090.1 Olea europaea HOM05D005542 ORTHO05D006708 2.2e-69 266.2 220 63.6
Solyc09g007450.3 Solanum lycopersicum HOM05D005542 ORTHO05D006708 3.8e-69 265.4 221 65.2
Lalb_Chr21g0314711 Lupinus albus HOM05D005542 ORTHO05D006708 1.1e-68 263.8 204 64.2
Gohir.A13G082150 Gossypium hirsutum HOM05D005542 ORTHO05D006708 1.9e-68 263.1 216 65.7
Phvul.007G164600 Phaseolus vulgaris HOM05D005542 ORTHO05D006708 2.5e-68 262.7 216 62.5
Actinidia19704 Actinidia chinensis HOM05D005542 ORTHO05D006708 5.5e-68 261.5 186 71.0
HanXRQChr13g0399561 Helianthus annuus HOM05D005542 ORTHO05D006708 9.3e-68 260.8 210 64.3
PSO063G7551 Papaver somniferum HOM05D005542 ORTHO05D006708 9.3e-68 260.8 218 61.0
PSO339G3338 Papaver somniferum HOM05D005542 ORTHO05D006708 9.3e-68 260.8 218 61.0
SEGI_14044 Sequoiadendron giganteum HOM05D005542 ORTHO05D006708 2.1e-67 259.6 212 60.4
Glyma.10G050300 Glycine max HOM05D005542 ORTHO05D006708 3.5e-67 258.8 219 62.1
Mapoly0060s0060 Marchantia polymorpha HOM05D005542 ORTHO05D006708 1.9e-65 253.1 211 59.7
Nitab4.5_0000669g0160 Nicotiana tabacum HOM05D005542 ORTHO05D006708 1.9e-65 253.1 218 63.8
Sp6g39610 Schrenkiella parvula HOM05D005542 ORTHO05D006708 1.9e-65 253.1 213 62.4
Glyma.13G137800 Glycine max HOM05D005542 ORTHO05D006708 7.4e-65 251.1 221 60.2
HanXRQChr11g0350001 Helianthus annuus HOM05D005542 ORTHO05D006708 2.8e-64 249.2 215 60.9
A10p32790 Brassica napus HOM05D005542 ORTHO05D006708 1.4e-63 246.9 213 60.6
BraA10t45313Z Brassica rapa HOM05D005542 ORTHO05D006708 1.4e-63 246.9 213 60.6
SMO367G0756 Selaginella moellendorffii HOM05D005542 ORTHO05D006708 4.5e-62 241.9 210 58.6
COL.COLO4_27064 Corchorus olitorius HOM05D005542 ORTHO05D006708 2.9e-61 239.2 168 73.2
CDE02G2407 Ceratophyllum demersum HOM05D000280 ORTHO05D000632 8.4e-61 237.7 163 73.6
CiPaw.10G136900 Carya illinoinensis HOM05D005542 ORTHO05D006708 6.1e-59 231.5 224 54.5
PGR004G0770 Punica granatum HOM05D005542 ORTHO05D006708 1.0e-58 230.7 211 59.7
COL.COLO4_27065 Corchorus olitorius HOM05D005542 ORTHO05D006708 3.0e-58 229.2 169 69.8
Oeu029419.1 Olea europaea HOM05D005542 ORTHO05D006708 3.0e-58 229.2 167 71.3
Pp3c16_13170 Physcomitrium patens HOM05D005542 ORTHO05D006708 1.9e-57 226.5 211 54.0
Pp3c5_750 Physcomitrium patens HOM05D005542 ORTHO05D006708 3.7e-56 222.2 212 51.9
Peaxi162Scf00005g04018 Petunia axillaris HOM05D005542 ORTHO05D006708 1.1e-55 220.7 199 60.8
Gohir.A04G076100 Gossypium hirsutum HOM05D005542 ORTHO05D006708 1.0e-53 214.2 161 70.8
EL10Ac7g16508 Beta vulgaris HOM05D005542 ORTHO05D006708 1.1e-52 210.7 171 64.3
Gohir.D04G115201 Gossypium hirsutum HOM05D005542 ORTHO05D006708 1.0e-50 204.1 213 55.4
BolC9t60096H Brassica oleracea HOM05D005542 ORTHO05D006708 1.4e-50 203.8 163 64.4
Lalb_Chr06g0171481 Lupinus albus HOM05D005542 ORTHO05D006708 1.7e-48 196.8 204 52.9
Nitab4.5_0007806g0040 Nicotiana tabacum HOM05D005542 ORTHO05D006708 4.5e-46 188.7 221 50.7
MD04G1102900 Malus domestica HOM05D005542 ORTHO05D006708 5.9e-46 188.3 137 69.3
Ca_11456_v3 Cicer arietinum L. HOM05D005542 ORTHO05D006708 2.1e-43 179.9 130 71.5
Atru.chr5.2634 Acer truncatum HOM05D005542 ORTHO05D006708 5.7e-41 171.8 128 68.8
Gorai.009G419800 Gossypium raimondii HOM05D005542 ORTHO05D006708 8.2e-40 167.9 205 48.3
VMungo0720G1693 Vigna mungo HOM05D005542 ORTHO05D006708 8.5e-37 157.9 128 62.5
Cpa.g.c48297 Carica papaya HOM05D005542 ORTHO05D006708 3.0e-34 149.4 101 70.3
Rhsim04G0149700 Rhododendron simsii HOM05D005542 ORTHO05D006708 6.5e-29 131.7 87 73.6
ECA233G4004 Erigeron canadensis HOM05D005542 ORTHO05D006708 1.0e-26 124.4 87 72.4
Cre06.g272400 Chlamydomonas reinhardtii HOM05D005542 ORTHO05D006708 2.3e-18 96.7 209 34.4
Lalb_Chr05g0212641 Lupinus albus HOM05D003144 ORTHO05D003539 2.2e-08 63.5 128 28.9
Glyma.11G071400 Glycine max HOM05D003144 ORTHO05D003539 2.4e-07 60.1 132 31.8
HanXRQChr16g0530671 Helianthus annuus HOM05D003144 ORTHO05D003539 2.4e-07 60.1 149 29.5
Actinidia19199 Actinidia chinensis HOM05D003144 ORTHO05D003539 4.1e-07 59.3 122 29.5
Potri.005G120400 Populus trichocarpa HOM05D003144 ORTHO05D003539 4.1e-07 59.3 120 29.2
AUR62004087 Chenopodium quinoa HOM05D003144 ORTHO05D003539 5.4e-07 58.9 150 28.7
Potri.007G021600 Populus trichocarpa HOM05D003144 ORTHO05D003539 9.2e-07 58.2 122 28.7
AUR62004088 Chenopodium quinoa HOM05D003144 ORTHO05D003539 1.2e-06 57.8 149 26.8
Medtr8g077115 Medicago truncatula HOM05D003144 ORTHO05D003539 1.2e-06 57.8 131 32.1
Nn1g04916 Nelumbo nucifera HOM05D003144 ORTHO05D003539 1.2e-06 57.8 137 30.7
Lsat_1_v5_gn_3_75940 Lactuca sativa HOM05D003144 ORTHO05D003539 1.6e-06 57.4 128 29.7
PRCOL_00003536 Prasinoderma coloniale HOM05D003144 ORTHO05D003539 2.0e-06 57.0 112 33.0
Glyma.01G171800 Glycine max HOM05D003144 ORTHO05D003539 2.7e-06 56.6 150 29.3
PGR102G0163 Punica granatum HOM05D003144 ORTHO05D003539 3.5e-06 56.2 133 27.8
HPP92_013478 Vanilla planifolia HOM05D003144 ORTHO05D003539 3.5e-06 56.2 123 31.7
Actinidia35629 Actinidia chinensis HOM05D003144 ORTHO05D003539 7.8e-06 55.1 146 27.4
Haze_15060 Corylus avellana HOM05D003144 ORTHO05D003539 7.8e-06 55.1 129 29.5


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