Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 5.3e-151 537.7 284 100.0
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 8.2e-136 487.3 261 98.1
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 5.3e-135 484.6 261 97.7
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 5.3e-127 458.0 268 91.4
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 4.2e-124 448.4 293 84.6
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 7.2e-124 447.6 267 90.3
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 1.2e-123 446.8 269 90.0
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 1.2e-123 446.8 262 91.2
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 8.8e-122 440.7 292 84.2
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 1.5e-121 439.9 262 90.1
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 2.0e-113 412.9 271 84.1
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 3.4e-113 412.1 271 83.8
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 9.1e-103 377.5 263 79.8
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 3.5e-54 216.1 125 92.0
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 4.9e-48 195.7 271 49.4
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 1.3e-45 187.6 286 45.8
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 1.8e-42 177.2 281 45.9
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 1.8e-42 177.2 296 47.0
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 5.3e-42 175.6 288 49.3
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 1.5e-41 174.1 296 45.3
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 1.5e-41 174.1 285 48.4
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 4.5e-41 172.6 286 44.4
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 5.5e-39 165.6 280 46.4
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 1.2e-38 164.5 284 46.5
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 1.0e-37 161.4 295 42.7
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 3.9e-37 159.5 315 41.6
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 1.1e-36 157.9 297 42.4
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 9.6e-36 154.8 259 44.4
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 1.3e-35 154.5 259 44.0
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 1.6e-35 154.1 258 43.4
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 2.8e-35 153.3 290 41.4
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 8.2e-35 151.8 293 40.6
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 1.8e-34 150.6 293 41.0
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 4.1e-34 149.4 278 40.6
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 1.2e-33 147.9 294 41.5
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 1.7e-32 144.1 281 39.1
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 6.5e-32 142.1 225 44.0
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 8.5e-32 141.7 275 40.4
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 1.9e-31 140.6 303 40.3
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 3.9e-29 132.9 301 39.2
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 3.9e-29 132.9 281 39.5
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 8.7e-29 131.7 246 39.8
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 1.9e-28 130.6 252 42.5
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 2.5e-28 130.2 286 38.1
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 3.3e-28 129.8 277 39.7
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 4.3e-28 129.4 276 40.9
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 5.7e-28 129.0 296 37.2
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 7.4e-28 128.6 239 38.1
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 9.7e-28 128.3 195 43.1
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 2.8e-27 126.7 330 34.2
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 2.8e-27 126.7 291 37.1
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 2.8e-27 126.7 281 37.7
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 2.8e-27 126.7 239 38.1
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 3.7e-27 126.3 281 38.8
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 3.7e-27 126.3 293 36.9
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 1.8e-26 124.0 298 38.3
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 3.1e-26 123.2 326 35.3
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 3.1e-26 123.2 216 37.5
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 5.3e-26 122.5 151 52.3
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 1.2e-25 121.3 289 34.9
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 3.4e-25 119.8 321 33.6
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 4.5e-25 119.4 271 36.9
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.0e-24 118.2 168 50.0
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 2.9e-24 116.7 252 38.1
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 5.0e-24 115.9 285 36.5
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 6.5e-24 115.5 275 36.4
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 1.9e-23 114.0 261 34.9
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 2.5e-23 113.6 302 35.1
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 7.9e-22 108.6 261 36.8
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 1.4e-21 107.8 270 37.0
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 3.0e-21 106.7 278 34.5
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 6.7e-21 105.5 283 36.7
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 1.1e-20 104.8 280 35.0
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 4.3e-20 102.8 273 35.5
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 1.7e-19 100.9 279 36.2
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 6.3e-19 99.0 277 35.7
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 4.1e-18 96.3 282 34.4
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 9.1e-18 95.1 313 33.5
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 3.4e-17 93.2 283 36.7
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 5.9e-17 92.4 174 38.5
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 7.7e-17 92.0 284 34.5
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 1.0e-16 91.7 275 34.2
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 2.9e-16 90.1 282 34.8
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 6.5e-16 89.0 301 35.5
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 8.5e-16 88.6 118 43.2
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 2.5e-15 87.0 277 30.3
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 3.2e-15 86.7 264 32.6
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 4.2e-15 86.3 300 34.3
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 4.2e-15 86.3 121 45.5
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 1.7e-11 74.3 210 36.2
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 4.8e-11 72.8 120 41.7
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 1.8e-10 70.9 111 41.4
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 1.9e-07 60.8 112 39.3
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 4.7e-06 56.2 118 34.7


User provided reference genes

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