Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 7.0e-219 763.8 441 100.0
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 8.9e-214 746.9 442 93.2
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 4.6e-194 681.4 442 93.0
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 6.7e-169 597.8 409 85.6
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 1.8e-158 563.1 406 82.5
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 2.1e-154 549.7 432 77.8
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 1.0e-153 547.4 387 83.5
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 1.0e-153 547.4 434 73.5
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 3.3e-152 542.3 458 70.7
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 4.5e-149 531.9 413 75.5
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 1.7e-148 530.0 412 77.4
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 1.4e-145 520.4 412 76.5
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 1.4e-121 440.7 292 84.2
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 2.3e-92 343.6 263 80.2
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 2.0e-72 277.3 408 47.8
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 4.0e-65 253.1 432 43.8
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 2.1e-61 240.7 426 43.2
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 1.3e-60 238.0 438 41.1
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 1.9e-59 234.2 428 45.6
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 2.8e-58 230.3 448 41.5
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 3.1e-57 226.9 435 43.9
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 1.0e-52 211.8 434 40.3
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 1.0e-52 211.8 444 38.5
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 3.3e-51 206.8 430 38.8
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 5.7e-51 206.1 419 39.4
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 7.4e-51 205.7 446 39.7
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 4.8e-50 203.0 450 37.6
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 4.8e-50 203.0 422 41.5
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 1.1e-49 201.8 434 40.8
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 1.1e-49 201.8 425 38.1
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 1.2e-48 198.4 441 38.5
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 1.5e-48 198.0 418 42.8
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 2.2e-47 194.1 468 37.4
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 5.0e-47 193.0 427 40.0
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 8.8e-44 182.2 427 38.4
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 1.1e-43 181.8 427 38.2
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 4.3e-43 179.9 426 37.6
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 5.7e-43 179.5 429 35.4
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 9.7e-43 178.7 434 37.8
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 1.7e-42 177.9 280 42.9
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 2.2e-42 177.6 428 41.8
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 2.8e-42 177.2 280 42.5
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 3.7e-42 176.8 449 39.2
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 1.1e-41 175.3 447 35.8
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 1.8e-41 174.5 419 38.2
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 2.4e-41 174.1 453 34.4
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 2.4e-41 174.1 426 35.0
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 4.1e-41 173.3 403 37.5
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 1.5e-40 171.4 280 42.9
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 3.4e-40 170.2 428 36.4
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 7.7e-40 169.1 421 41.3
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 1.7e-39 167.9 448 35.7
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 1.7e-39 167.9 375 37.3
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 2.5e-38 164.1 415 40.5
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 7.2e-38 162.5 460 35.9
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 2.7e-37 160.6 434 43.8
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 6.1e-37 159.5 258 45.0
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 1.8e-36 157.9 428 39.7
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 5.1e-36 156.4 411 36.3
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 1.5e-35 154.8 441 34.5
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 1.5e-35 154.8 410 35.6
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 2.6e-35 154.1 353 37.7
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 6.3e-34 149.4 432 36.8
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.1e-33 148.7 274 47.4
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 1.8e-33 147.9 421 37.1
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 2.6e-32 144.1 285 46.3
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 5.9e-32 142.9 412 33.7
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 1.7e-31 141.4 405 35.1
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 5.0e-31 139.8 277 39.0
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 1.9e-30 137.9 337 37.4
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 1.9e-30 137.9 426 34.0
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 7.2e-30 136.0 243 39.5
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 9.4e-30 135.6 424 35.1
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 5.2e-28 129.8 324 37.7
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 1.1e-27 128.6 412 35.7
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 1.5e-27 128.3 410 35.4
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 2.2e-26 124.4 411 36.0
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 4.1e-25 120.2 421 34.7
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 7.0e-25 119.4 268 44.0
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 9.1e-25 119.0 427 32.8
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 9.1e-25 119.0 415 34.7
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 5.0e-23 113.2 373 34.6
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 6.5e-23 112.8 432 34.5
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 2.5e-22 110.9 429 31.5
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 3.2e-22 110.5 459 29.4
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 5.5e-22 109.8 266 35.3
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 7.2e-22 109.4 252 37.3
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 6.1e-21 106.3 423 34.3
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 3.0e-20 104.0 272 35.3
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 5.2e-20 103.2 248 36.3
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 4.8e-18 96.7 291 33.3
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 1.9e-14 84.7 115 44.3
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 1.5e-11 75.1 99 45.5
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 9.2e-09 65.9 72 48.6
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 5.6e-06 56.6 110 39.1


User provided reference genes

Program Settings