Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 1.7e-222 775.8 418 100.0
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 1.1e-213 746.5 442 93.2
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 5.7e-194 681.0 442 87.6
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 2.9e-174 615.5 385 90.9
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 8.0e-164 580.9 381 87.9
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 9.2e-160 567.4 408 82.4
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 1.6e-159 566.6 363 89.3
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 4.6e-159 565.1 410 77.8
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 1.9e-157 559.7 434 74.7
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 2.3e-155 552.7 389 80.7
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 9.2e-152 540.8 389 81.7
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 7.3e-149 531.2 389 80.7
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 7.8e-127 458.0 268 91.4
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 1.9e-93 347.1 263 79.8
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 4.4e-77 292.7 385 50.9
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 1.4e-70 271.2 409 46.7
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 1.4e-67 261.2 403 46.2
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 1.8e-67 260.8 417 45.3
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 1.3e-65 254.6 413 46.7
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 8.5e-65 251.9 423 44.4
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 1.6e-63 247.7 411 46.7
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 2.0e-58 230.7 406 42.9
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 3.5e-58 229.9 422 42.7
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 5.9e-58 229.2 410 42.7
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 2.9e-57 226.9 428 41.4
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 1.9e-56 224.2 399 44.4
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 9.5e-56 221.9 403 42.2
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 2.1e-55 220.7 405 41.5
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 8.0e-55 218.8 435 40.5
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 1.4e-54 218.0 417 41.2
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 1.2e-53 214.9 424 42.0
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 2.6e-53 213.8 406 42.9
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 5.7e-53 212.6 399 43.1
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 2.2e-52 210.7 461 38.6
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 1.3e-49 201.4 427 42.4
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 8.6e-49 198.7 406 40.6
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 1.1e-48 198.4 406 40.4
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 1.1e-48 198.4 402 38.1
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 5.6e-48 196.1 405 39.8
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 6.1e-47 192.6 458 36.7
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 1.4e-46 191.4 426 39.4
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 4.0e-46 189.9 393 40.5
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 5.2e-46 189.5 398 44.5
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 5.2e-46 189.5 436 37.6
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 5.2e-46 189.5 405 38.0
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 2.0e-45 187.6 404 39.4
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 7.5e-45 185.7 388 39.7
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 9.8e-45 185.3 402 37.6
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 9.8e-45 185.3 437 37.5
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 9.8e-45 185.3 366 38.0
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 2.9e-44 183.7 366 37.7
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 4.1e-43 179.9 447 37.8
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 5.4e-43 179.5 368 38.0
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 1.2e-42 178.3 365 39.5
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 4.6e-42 176.4 416 36.8
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 2.3e-41 174.1 391 37.1
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 8.6e-41 172.2 403 41.7
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 8.6e-41 172.2 410 40.2
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 1.5e-40 171.4 409 37.9
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 2.5e-40 170.6 331 40.2
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 2.5e-40 170.6 408 39.5
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 5.6e-40 169.5 390 37.7
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 7.3e-40 169.1 397 40.6
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 3.4e-37 160.2 320 40.6
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 9.8e-37 158.7 408 34.3
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 2.2e-36 157.5 381 37.5
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 4.9e-36 156.4 313 40.6
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 6.4e-36 156.0 400 39.5
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 2.4e-35 154.1 401 35.4
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 7.0e-35 152.5 400 37.0
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 2.1e-34 151.0 412 39.1
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 2.3e-33 147.5 301 40.9
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 3.3e-32 143.7 243 39.9
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 4.3e-32 143.3 386 37.8
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 5.6e-32 142.9 317 37.5
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 4.7e-31 139.8 396 37.6
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 1.8e-30 137.9 397 36.8
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 6.8e-30 136.0 398 36.7
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 7.5e-29 132.5 404 35.9
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 1.7e-28 131.3 401 35.7
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 1.9e-27 127.9 405 33.3
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 3.2e-27 127.1 398 36.7
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 9.2e-27 125.6 435 31.5
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 2.1e-26 124.4 356 36.2
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 1.3e-25 121.7 387 36.2
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 1.7e-25 121.3 401 36.2
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 5.6e-24 116.3 252 38.1
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 1.2e-23 115.2 266 35.7
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 3.6e-23 113.6 383 31.9
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 1.1e-22 112.1 268 35.8
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 1.7e-20 104.8 342 33.9
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 1.8e-14 84.7 115 44.3
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 1.9e-11 74.7 99 45.5
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 3.5e-10 70.5 111 40.5
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 1.6e-07 61.6 111 39.6
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 6.2e-07 59.7 127 36.2
SEGI_31561 Sequoiadendron giganteum HOM05D007360 ORTHO05D008235 9.0e-06 55.8 279 26.2


User provided reference genes

Program Settings