Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 2.5e-216 755.4 437 100.0
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 7.0e-195 684.1 442 87.6
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 9.2e-195 683.7 442 93.0
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 3.1e-190 668.7 404 92.6
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 1.4e-171 606.7 401 86.8
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 8.7e-169 597.4 383 88.5
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 1.8e-166 589.7 427 81.5
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 4.4e-165 585.1 429 77.4
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 3.3e-160 568.9 453 72.8
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 6.9e-158 561.2 408 78.7
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 7.1e-155 551.2 408 79.4
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 3.1e-150 535.8 408 77.9
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 1.0e-124 451.1 293 84.6
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 8.3e-103 378.3 258 86.0
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 7.3e-75 285.4 402 47.0
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 4.1e-70 269.6 427 44.0
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 7.8e-61 238.8 445 40.9
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 1.0e-60 238.4 441 40.8
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 1.3e-60 238.0 426 45.1
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 1.7e-60 237.7 419 42.5
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 2.4e-57 227.3 430 43.3
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 8.4e-55 218.8 430 41.2
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 1.4e-54 218.0 420 41.0
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 2.1e-53 214.2 439 38.0
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 6.6e-52 209.1 428 38.1
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 8.7e-52 208.8 453 37.1
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 1.9e-51 207.6 436 38.3
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 3.3e-51 206.8 417 41.5
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 1.3e-50 204.9 419 37.9
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 4.8e-50 203.0 409 38.4
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 3.1e-49 200.3 434 39.4
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 4.0e-49 199.9 413 42.4
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 5.3e-49 199.5 429 39.9
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 1.1e-46 191.8 423 41.8
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 7.1e-46 189.1 385 38.7
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 6.0e-45 186.0 468 35.5
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 5.6e-43 179.5 416 41.6
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 9.6e-43 178.7 451 33.7
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 1.6e-42 177.9 428 34.8
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 2.1e-42 177.6 426 35.9
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 8.1e-42 175.6 422 36.7
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 1.1e-41 175.3 422 36.5
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 5.3e-41 172.9 421 35.9
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 6.9e-41 172.6 427 36.1
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 9.0e-41 172.2 433 38.6
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 1.2e-40 171.8 275 40.7
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 2.6e-40 170.6 422 39.3
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 5.8e-40 169.5 412 36.9
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 5.8e-40 169.5 429 43.4
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 1.7e-39 167.9 420 37.4
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 4.9e-39 166.4 370 35.7
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 6.4e-39 166.0 415 40.5
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 1.1e-38 165.2 370 36.2
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 1.4e-38 164.9 435 34.9
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 2.4e-38 164.1 434 34.1
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 3.2e-38 163.7 257 44.0
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 4.6e-37 159.8 416 37.7
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 6.0e-37 159.5 275 41.1
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 2.3e-36 157.5 355 36.6
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 8.7e-36 155.6 272 47.4
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 2.5e-35 154.1 459 34.4
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 5.6e-35 152.9 283 46.6
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 5.6e-35 152.9 427 36.5
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 9.6e-35 152.1 434 33.2
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 9.6e-35 152.1 398 35.4
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 1.6e-34 151.4 337 38.0
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 3.7e-34 150.2 420 34.3
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 6.9e-33 146.0 405 34.6
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 4.9e-31 139.8 415 33.7
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 1.1e-30 138.7 400 34.0
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 7.1e-30 136.0 289 38.8
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 4.6e-29 133.3 266 43.6
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 6.0e-29 132.9 421 34.2
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 6.0e-29 132.9 454 30.4
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 1.0e-28 132.1 272 36.4
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 1.8e-28 131.3 406 35.2
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 3.0e-28 130.6 411 35.5
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 3.9e-28 130.2 238 37.4
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 6.7e-28 129.4 405 34.8
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 4.1e-25 120.2 369 33.6
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 4.1e-25 120.2 230 37.0
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 5.3e-25 119.8 408 33.1
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 1.2e-24 118.6 251 37.1
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 1.5e-24 118.2 419 32.0
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 3.4e-24 117.1 368 33.4
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 2.9e-23 114.0 427 34.2
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 3.2e-22 110.5 424 30.9
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 4.6e-21 106.7 418 33.3
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 4.6e-21 106.7 346 31.5
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 1.1e-19 102.1 234 37.2
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 2.5e-19 100.9 301 32.9
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 2.0e-16 91.3 112 46.4
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 4.3e-11 73.6 99 43.4
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 5.3e-09 66.6 72 47.2
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 1.7e-07 61.6 149 30.2
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 8.5e-07 59.3 120 37.5


User provided reference genes

Program Settings