Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 5.5e-207 724.2 393 100.0
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 5.0e-200 701.0 393 97.5
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 5.2e-173 611.3 406 84.0
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 3.5e-153 545.4 354 87.3
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 7.8e-153 544.3 375 83.7
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 3.1e-149 532.3 408 77.9
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 6.9e-149 531.2 389 80.7
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 8.9e-149 530.8 384 81.2
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 1.6e-145 520.0 412 76.5
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 6.0e-145 518.1 402 77.1
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 7.3e-143 511.1 404 72.0
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 4.9e-131 471.9 383 71.3
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 1.6e-121 440.3 262 90.1
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 3.5e-84 316.2 257 75.1
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 1.3e-78 297.7 413 47.9
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 1.4e-77 294.3 428 45.8
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 2.3e-67 260.4 438 44.7
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 3.8e-67 259.6 430 45.8
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 4.0e-64 249.6 423 44.4
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 2.0e-63 247.3 426 45.1
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 9.8e-63 245.0 431 43.2
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 1.4e-61 241.1 421 43.7
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 1.4e-61 241.1 421 44.2
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 6.0e-60 235.7 422 41.7
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 6.6e-59 232.3 434 41.2
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 2.0e-55 220.7 416 40.1
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 3.4e-55 219.9 416 39.9
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 4.4e-55 219.5 424 39.9
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 7.5e-55 218.8 455 39.8
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 2.2e-54 217.2 438 39.5
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 2.2e-54 217.2 415 39.8
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 6.4e-54 215.7 388 44.1
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 4.1e-53 213.0 402 41.3
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 3.5e-52 209.9 445 39.3
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 3.0e-51 206.8 422 37.9
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 8.6e-51 205.3 422 37.2
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 5.6e-50 202.6 368 41.3
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 9.5e-50 201.8 335 41.2
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 9.5e-50 201.8 416 42.5
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 1.2e-49 201.4 419 40.3
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 3.1e-48 196.8 419 37.2
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 3.1e-48 196.8 413 42.4
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 4.0e-48 196.4 422 38.6
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 2.0e-47 194.1 399 39.3
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 7.5e-47 192.2 387 38.8
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 1.9e-45 187.6 313 40.9
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 9.2e-45 185.3 313 40.6
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 1.2e-44 184.9 467 36.0
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 3.5e-44 183.3 434 39.2
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 4.6e-44 183.0 300 40.7
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 5.1e-43 179.5 411 40.9
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 5.1e-43 179.5 425 36.9
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 3.3e-42 176.8 453 35.3
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 4.3e-42 176.4 457 36.8
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 6.2e-41 172.6 410 37.3
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 2.4e-40 170.6 436 36.0
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 2.0e-39 167.5 431 35.5
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 5.8e-39 166.0 395 38.0
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 7.6e-39 165.6 394 39.3
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.7e-38 164.5 439 38.7
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.7e-38 164.5 433 39.0
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 2.2e-38 164.1 422 36.5
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.6e-36 157.9 312 40.7
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 4.6e-36 156.4 480 34.0
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 7.8e-36 155.6 407 33.7
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 1.3e-35 154.8 410 37.6
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 3.0e-35 153.7 417 36.0
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 6.6e-35 152.5 369 36.6
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 2.1e-33 147.5 418 35.4
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 2.8e-33 147.1 418 35.4
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 3.6e-33 146.7 417 33.1
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 4.7e-33 146.4 259 38.2
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 2.0e-31 141.0 421 34.4
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 3.4e-31 140.2 408 35.0
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 5.8e-31 139.4 384 36.5
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 3.8e-30 136.7 413 34.1
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 4.9e-30 136.3 421 33.3
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 1.1e-29 135.2 419 34.6
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 5.4e-29 132.9 318 36.2
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 2.1e-28 131.0 416 35.8
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 3.5e-28 130.2 415 35.9
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 4.6e-28 129.8 401 35.7
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 1.0e-27 128.6 314 36.9
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 3.9e-27 126.7 283 38.9
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 2.5e-26 124.0 314 36.3
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 9.6e-26 122.1 251 38.6
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 6.2e-25 119.4 230 36.5
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 5.3e-24 116.3 265 38.1
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 3.2e-21 107.1 388 29.9
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 2.7e-20 104.0 335 34.0
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 1.8e-19 101.3 270 37.4
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 9.0e-16 89.0 116 45.7
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 9.0e-16 89.0 90 53.3
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 6.9e-08 62.8 168 34.5


User provided reference genes

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