Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G004100 Manihot esculenta HOM05D005542 ORTHO05D006708 1.7e-128 462.6 224 100.0
Manes.08G004101 Manihot esculenta HOM05D005542 ORTHO05D006708 1.1e-116 423.3 224 94.6
Manes.08G004113 Manihot esculenta HOM05D005542 ORTHO05D006708 1.1e-116 423.3 224 94.6
Manes.08G004123 Manihot esculenta HOM05D005542 ORTHO05D006708 1.1e-116 423.3 224 94.6
Manes.08G004124 Manihot esculenta HOM05D005542 ORTHO05D006708 1.1e-116 423.3 224 94.6
Manes.08G004129 Manihot esculenta HOM05D005542 ORTHO05D006708 1.1e-116 423.3 224 94.6
Potri.006G130700 Populus trichocarpa HOM05D005542 ORTHO05D006708 2.6e-100 369.0 221 80.5
Sed0012482 Sechium edule HOM05D005542 ORTHO05D006708 2.2e-96 355.9 224 77.2
Cfa017517 Carpinus fangiana HOM05D005542 ORTHO05D006708 5.0e-96 354.8 219 78.1
MD12G1123000 Malus domestica HOM05D005542 ORTHO05D006708 5.0e-96 354.8 217 77.9
Sabra06G0102700 Salix brachista HOM05D005542 ORTHO05D006708 1.1e-95 353.6 221 76.5
TAR623G0063 Trochodendron aralioides HOM05D005542 ORTHO05D006708 1.9e-95 352.8 219 77.6
Prupe.6G240200 Prunus persica HOM05D005542 ORTHO05D006708 2.5e-95 352.4 220 76.8
Gorai.001G248000 Gossypium raimondii HOM05D005542 ORTHO05D006708 9.4e-95 350.5 216 79.6
Sabra16G0093000 Salix brachista HOM05D005542 ORTHO05D006708 1.2e-94 350.1 219 76.7
RcHm_v2.0_Chr3g0468971 Rosa chinensis HOM05D005542 ORTHO05D006708 1.0e-93 347.1 219 77.2
Aqoxy4G03224 Aquilegia oxysepala HOM05D005542 ORTHO05D006708 5.2e-93 344.7 212 76.9
CANSAT80G0049 Cannabis sativa HOM05D005542 ORTHO05D006708 5.2e-93 344.7 211 77.7
Haze_20632 Corylus avellana HOM05D005542 ORTHO05D006708 5.2e-93 344.7 218 76.6
Sed0011219 Sechium edule HOM05D005542 ORTHO05D006708 5.2e-93 344.7 224 74.6
FAN14G1906 Fragaria x ananassa HOM05D005542 ORTHO05D006708 8.8e-93 344.0 216 75.0
Dinv37264 Davidia involucrata HOM05D005542 ORTHO05D006708 2.6e-92 342.4 218 75.2
FvH4_6g15490 Fragaria vesca HOM05D005542 ORTHO05D006708 2.6e-92 342.4 216 75.0
FAN09G2765 Fragaria x ananassa HOM05D005542 ORTHO05D006708 2.6e-92 342.4 216 75.0
Cfa017518 Carpinus fangiana HOM05D005542 ORTHO05D006708 1.3e-91 340.1 219 75.3
FAN02G2564 Fragaria x ananassa HOM05D005542 ORTHO05D006708 1.7e-91 339.7 216 75.0
FAN05G5506 Fragaria x ananassa HOM05D005542 ORTHO05D006708 2.2e-91 339.3 216 74.5
Potri.016G086700 Populus trichocarpa HOM05D005542 ORTHO05D006708 2.8e-91 339.0 219 74.9
Lj3P980T19 Lonicera japonica HOM05D005542 ORTHO05D006708 8.3e-91 337.4 220 73.6
THA.LOC104823241 Tarenaya hassleriana HOM05D005542 ORTHO05D006708 7.0e-90 334.3 222 73.0
Dinv35725 Davidia involucrata HOM05D005542 ORTHO05D006708 2.7e-89 332.4 221 73.8
PGR142G2113 Punica granatum HOM05D005542 ORTHO05D006708 4.5e-89 331.6 223 71.7
MSTRG.10302 Avicennia marina HOM05D005542 ORTHO05D006708 2.9e-88 328.9 217 75.6
MSTRG.19142 Avicennia marina HOM05D005542 ORTHO05D006708 2.9e-88 328.9 217 73.7
CAN.G1676.11 Capsicum annuum HOM05D005542 ORTHO05D006708 5.0e-88 328.2 221 75.6
Migut.L01666 Erythranthe guttata HOM05D005542 ORTHO05D006708 5.0e-88 328.2 216 74.1
Hma1.2p1_0350F.1_g132800 Hydrangea macrophylla HOM05D005542 ORTHO05D006708 8.6e-88 327.4 218 72.0
HanXRQChr13g0399571 Helianthus annuus HOM05D005542 ORTHO05D006708 1.1e-87 327.0 215 74.4
MBI15_g16380_MAGBIO Magnolia biondii HOM05D005542 ORTHO05D006708 3.3e-87 325.5 218 73.4
Cc06_g03660 Coffea canephora HOM05D005542 ORTHO05D006708 4.3e-87 325.1 217 74.2
Hma1.2p1_0111F.1_g053980 Hydrangea macrophylla HOM05D005542 ORTHO05D006708 4.3e-87 325.1 212 75.0
TAR369G0130 Trochodendron aralioides HOM05D005542 ORTHO05D006708 8.0e-86 320.9 218 69.7
VMungo1309G1614 Vigna mungo HOM05D005542 ORTHO05D006708 8.0e-86 320.9 214 72.4
AL6G12370 Arabidopsis lyrata HOM05D005542 ORTHO05D006708 3.0e-85 318.9 213 72.3
Lsat_1_v5_gn_1_54060 Lactuca sativa HOM05D005542 ORTHO05D006708 8.9e-85 317.4 215 71.6
Lsat_1_v5_gn_6_30080 Lactuca sativa HOM05D005542 ORTHO05D006708 8.9e-85 317.4 215 73.5
Carub.0006s0187 Capsella rubella HOM05D005542 ORTHO05D006708 1.2e-84 317.0 213 72.8
Cpa.g.sc174.15 Carica papaya HOM05D005542 ORTHO05D006708 1.5e-84 316.6 225 69.8
Psat6g070280 Pisum sativum HOM05D005542 ORTHO05D006708 1.5e-84 316.6 216 71.8
TPR.G30255 Trifolium pratense HOM05D005542 ORTHO05D006708 1.5e-84 316.6 211 73.5
SGA_v2.0_scaffold94G28671 Striga asiatica HOM05D005542 ORTHO05D006708 2.0e-84 316.2 217 72.8
AT5G03080 Arabidopsis thaliana HOM05D005542 ORTHO05D006708 5.7e-84 314.7 213 72.3
AUR62040036 Chenopodium quinoa HOM05D005542 ORTHO05D006708 1.7e-83 313.2 220 69.1
BcaC06g32035 Brassica carinata HOM05D005542 ORTHO05D006708 3.7e-83 312.0 213 70.0
BolC9t60101H Brassica oleracea HOM05D005542 ORTHO05D006708 3.7e-83 312.0 213 70.0
AUR62042543 Chenopodium quinoa HOM05D005542 ORTHO05D006708 4.9e-83 311.6 220 68.6
THA.LOC104816326 Tarenaya hassleriana HOM05D005542 ORTHO05D006708 4.9e-83 311.6 219 69.9
C09p73660 Brassica napus HOM05D005542 ORTHO05D006708 1.1e-82 310.5 213 70.0
Thecc.05G055500 Theobroma cacao HOM05D005542 ORTHO05D006708 1.1e-82 310.5 222 71.2
BcaB05g21852 Brassica carinata HOM05D005542 ORTHO05D006708 1.4e-82 310.1 212 70.8
Thhalv10014320m.g Eutrema salsugineum HOM05D005542 ORTHO05D006708 1.8e-82 309.7 218 69.3
Lj5g0010386 Lotus japonicus HOM05D005542 ORTHO05D006708 3.2e-82 308.9 217 70.0
Medtr1g066770 Medicago truncatula HOM05D005542 ORTHO05D006708 3.2e-82 308.9 215 71.2
Duzib128G1803 Durio zibethinus HOM05D005542 ORTHO05D006708 4.1e-82 308.5 222 71.6
BcaC03g13032 Brassica carinata HOM05D005542 ORTHO05D006708 7.0e-82 307.8 211 69.7
BraA02t04743Z Brassica rapa HOM05D005542 ORTHO05D006708 7.0e-82 307.8 212 69.8
C02p00780 Brassica napus HOM05D005542 ORTHO05D006708 1.6e-81 306.6 212 69.3
BolC2t06076H Brassica oleracea HOM05D005542 ORTHO05D006708 1.6e-81 306.6 212 69.3
CARHR210250 Cardamine hirsuta HOM05D005542 ORTHO05D006708 5.9e-81 304.7 219 68.9
Ah.01g009250 Amaranthus hybridus HOM05D005542 ORTHO05D006708 1.7e-80 303.1 215 68.8
Eucgr.K03216 Eucalyptus grandis HOM05D005542 ORTHO05D006708 1.7e-80 303.1 220 67.7
DCAR_009281 Daucus carota HOM05D005542 ORTHO05D006708 5.0e-80 301.6 218 67.9
Nn2g10693 Nelumbo nucifera HOM05D005542 ORTHO05D006708 1.9e-79 299.7 218 67.0
HPP92_012051 Vanilla planifolia HOM05D005542 ORTHO05D006708 1.9e-79 299.7 217 68.7
Ciclev10012685m.g Citrus clementina HOM05D005542 ORTHO05D006708 1.2e-78 297.0 211 69.7
Gohir.D13G095800 Gossypium hirsutum HOM05D005542 ORTHO05D006708 2.8e-78 295.8 216 69.9
Nn2g10694 Nelumbo nucifera HOM05D005542 ORTHO05D006708 4.7e-78 295.0 219 66.7
MELO3C014679.2 Cucumis melo HOM05D005542 ORTHO05D006708 1.4e-77 293.5 219 67.1
MD04G1105500 Malus domestica HOM05D005542 ORTHO05D006708 4.0e-77 292.0 218 67.0
Aa31LG1G21960 Aethionema arabicum HOM05D005542 ORTHO05D006708 6.8e-77 291.2 212 68.9
ClCG02G023990 Citrullus lanatus HOM05D005542 ORTHO05D006708 8.9e-77 290.8 216 67.1
QL07p045114 Quercus lobata HOM05D005542 ORTHO05D006708 1.2e-76 290.4 219 66.2
Gohir.A13G082150 Gossypium hirsutum HOM05D005542 ORTHO05D006708 2.6e-76 289.3 216 69.0
CsaV3_4G023360 Cucumis sativus L. HOM05D005542 ORTHO05D006708 3.4e-76 288.9 219 66.7
SalBow3G3282 Salvia bowleyana HOM05D005542 ORTHO05D006708 3.4e-76 288.9 218 67.9
SalBow3G3389 Salvia bowleyana HOM05D005542 ORTHO05D006708 3.4e-76 288.9 218 67.9
Sc02g0001930 Simmondsia chinensis HOM05D005542 ORTHO05D006708 7.5e-76 287.7 215 66.5
unitig_26.g9217 Utricularia gibba HOM05D005542 ORTHO05D006708 9.8e-76 287.3 205 69.3
CiPaw.09G179200 Carya illinoinensis HOM05D005542 ORTHO05D006708 1.7e-75 286.6 219 66.2
Zm00001eb013250 Zea mays HOM05D005542 ORTHO05D006708 1.7e-75 286.6 215 66.0
CSS0028203 Camellia sinensis var. sinensis HOM05D005542 ORTHO05D006708 3.7e-75 285.4 218 65.6
BcaNung06917 Brassica carinata HOM05D005542 ORTHO05D006708 8.3e-75 284.3 212 66.5
Sopen09g002330 Solanum pennellii HOM05D005542 ORTHO05D006708 8.3e-75 284.3 221 66.5
CSS0011727 Camellia sinensis var. sinensis HOM05D005542 ORTHO05D006708 1.1e-74 283.9 218 65.1
Oeu060090.1 Olea europaea HOM05D005542 ORTHO05D006708 1.4e-74 283.5 220 65.0
SHI12539 Sapria himalayana HOM05D005542 ORTHO05D006708 2.4e-74 282.7 219 67.1
ATR0314G039 Amborella trichopoda HOM05D005542 ORTHO05D006708 5.4e-74 281.6 215 65.1
Os03g0288700 Oryza sativa ssp. japonica HOM05D005542 ORTHO05D006708 1.6e-73 280.0 215 65.6
PSO063G7551 Papaver somniferum HOM05D005542 ORTHO05D006708 3.5e-73 278.9 218 63.3
PSO339G3338 Papaver somniferum HOM05D005542 ORTHO05D006708 3.5e-73 278.9 218 63.3
Actinidia19704 Actinidia chinensis HOM05D005542 ORTHO05D006708 1.0e-72 277.3 186 72.0
Solyc09g007450.3 Solanum lycopersicum HOM05D005542 ORTHO05D006708 2.3e-72 276.2 221 65.2
Phvul.007G164600 Phaseolus vulgaris HOM05D005542 ORTHO05D006708 1.1e-71 273.9 216 63.0
SEGI_14044 Sequoiadendron giganteum HOM05D005542 ORTHO05D006708 1.5e-71 273.5 212 60.8
HanXRQChr13g0399561 Helianthus annuus HOM05D005542 ORTHO05D006708 3.3e-71 272.3 210 65.2
Glyma.10G050300 Glycine max HOM05D005542 ORTHO05D006708 2.1e-70 269.6 219 62.6
Nitab4.5_0000669g0160 Nicotiana tabacum HOM05D005542 ORTHO05D006708 4.7e-70 268.5 218 64.7
Mapoly0060s0060 Marchantia polymorpha HOM05D005542 ORTHO05D006708 8.1e-70 267.7 211 61.1
Sp6g39610 Schrenkiella parvula HOM05D005542 ORTHO05D006708 1.1e-69 267.3 213 63.4
HanXRQChr11g0350001 Helianthus annuus HOM05D005542 ORTHO05D006708 1.4e-69 266.9 215 62.3
COL.COLO4_27064 Corchorus olitorius HOM05D005542 ORTHO05D006708 4.4e-68 261.9 168 77.4
Glyma.13G137800 Glycine max HOM05D005542 ORTHO05D006708 4.4e-68 261.9 221 60.6
A10p32790 Brassica napus HOM05D005542 ORTHO05D006708 7.5e-68 261.2 213 61.5
BraA10t45313Z Brassica rapa HOM05D005542 ORTHO05D006708 7.5e-68 261.2 213 61.5
Lalb_Chr21g0314711 Lupinus albus HOM05D005542 ORTHO05D006708 2.2e-67 259.6 216 60.6
COL.COLO4_27065 Corchorus olitorius HOM05D005542 ORTHO05D006708 3.2e-66 255.8 169 74.6
SMO367G0756 Selaginella moellendorffii HOM05D005542 ORTHO05D006708 2.1e-65 253.1 210 58.6
CiPaw.10G136900 Carya illinoinensis HOM05D005542 ORTHO05D006708 3.5e-65 252.3 224 56.7
Oeu029419.1 Olea europaea HOM05D005542 ORTHO05D006708 1.5e-63 246.9 167 73.1
CDE02G2407 Ceratophyllum demersum HOM05D000280 ORTHO05D000632 1.9e-63 246.5 163 74.2
PGR004G0770 Punica granatum HOM05D005542 ORTHO05D006708 4.7e-62 241.9 219 58.9
Pp3c16_13170 Physcomitrium patens HOM05D005542 ORTHO05D006708 8.1e-62 241.1 211 54.0
Gohir.A04G076100 Gossypium hirsutum HOM05D005542 ORTHO05D006708 2.3e-61 239.6 161 75.2
Pp3c5_750 Physcomitrium patens HOM05D005542 ORTHO05D006708 8.9e-61 237.7 212 53.3
Gohir.D04G115201 Gossypium hirsutum HOM05D005542 ORTHO05D006708 6.0e-57 224.9 216 57.4
EL10Ac7g16508 Beta vulgaris HOM05D005542 ORTHO05D006708 8.6e-56 221.1 171 65.5
BolC9t60096H Brassica oleracea HOM05D005542 ORTHO05D006708 7.3e-55 218.0 163 65.6
Peaxi162Scf00005g04018 Petunia axillaris HOM05D005542 ORTHO05D006708 1.2e-54 217.2 211 57.3
MD04G1102900 Malus domestica HOM05D005542 ORTHO05D006708 1.4e-53 213.8 137 74.5
Nitab4.5_0007806g0040 Nicotiana tabacum HOM05D005542 ORTHO05D006708 1.1e-50 204.1 221 51.6
Lalb_Chr06g0171481 Lupinus albus HOM05D005542 ORTHO05D006708 3.3e-47 192.6 216 50.0
Atru.chr5.2634 Acer truncatum HOM05D005542 ORTHO05D006708 7.3e-47 191.4 128 71.1
Gorai.009G419800 Gossypium raimondii HOM05D005542 ORTHO05D006708 1.1e-45 187.6 217 51.6
Ca_11456_v3 Cicer arietinum L. HOM05D005542 ORTHO05D006708 9.0e-45 184.5 133 69.9
VMungo0720G1693 Vigna mungo HOM05D005542 ORTHO05D006708 1.6e-38 163.7 133 60.9
Cpa.g.c48297 Carica papaya HOM05D005542 ORTHO05D006708 3.2e-34 149.4 101 70.3
Rhsim04G0149700 Rhododendron simsii HOM05D005542 ORTHO05D006708 8.1e-30 134.8 89 73.0
ECA233G4004 Erigeron canadensis HOM05D005542 ORTHO05D006708 1.3e-27 127.5 89 71.9
Cre06.g272400 Chlamydomonas reinhardtii HOM05D005542 ORTHO05D006708 1.5e-20 104.0 209 35.9
PRCOL_00003536 Prasinoderma coloniale HOM05D003144 ORTHO05D003539 5.1e-08 62.4 112 35.7
AUR62004087 Chenopodium quinoa HOM05D003144 ORTHO05D003539 6.7e-08 62.0 158 29.1
Lalb_Chr05g0212641 Lupinus albus HOM05D003144 ORTHO05D003539 2.0e-07 60.5 133 28.6
AUR62004088 Chenopodium quinoa HOM05D003144 ORTHO05D003539 4.4e-07 59.3 157 28.0
Glyma.11G071400 Glycine max HOM05D003144 ORTHO05D003539 4.4e-07 59.3 139 30.2
Potri.005G120400 Populus trichocarpa HOM05D003144 ORTHO05D003539 4.4e-07 59.3 124 29.8
HanXRQChr16g0530671 Helianthus annuus HOM05D003144 ORTHO05D003539 7.4e-07 58.5 153 30.1
Lsat_1_v5_gn_3_75940 Lactuca sativa HOM05D003144 ORTHO05D003539 7.4e-07 58.5 130 30.8
Potri.007G021600 Populus trichocarpa HOM05D003144 ORTHO05D003539 9.7e-07 58.2 130 27.7
Hund13998 Selenicereus undatus HOM05D003144 ORTHO05D003539 1.3e-06 57.8 151 25.8
Actinidia19199 Actinidia chinensis HOM05D003144 ORTHO05D003539 2.2e-06 57.0 131 27.5
Nn1g04916 Nelumbo nucifera HOM05D003144 ORTHO05D003539 2.8e-06 56.6 145 30.3
SalBow1G3910 Salvia bowleyana HOM05D007612 ORTHO05D009468 2.8e-06 56.6 134 33.6
Glyma.01G171800 Glycine max HOM05D003144 ORTHO05D003539 4.8e-06 55.8 152 27.0
HPP92_013478 Vanilla planifolia HOM05D003144 ORTHO05D003539 4.8e-06 55.8 127 32.3
Duzib205G1442 Durio zibethinus HOM05D007612 ORTHO05D009468 6.3e-06 55.5 126 31.7


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