Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G002100 Manihot esculenta HOM05D007368 ORTHO05D009330 4.1e-104 381.3 185 100.0
Eucgr.A01185 Eucalyptus grandis HOM05D007368 ORTHO05D009330 2.1e-47 193.0 150 72.0
Atru.chr8.2541 Acer truncatum HOM05D007368 ORTHO05D009330 5.7e-45 184.9 144 67.4
Haze_20668 Corylus avellana HOM05D007368 ORTHO05D009330 3.7e-44 182.2 142 71.1
Cfa017494 Carpinus fangiana HOM05D007368 ORTHO05D009330 1.1e-43 180.6 142 70.4
Ciclev10013048m.g Citrus clementina HOM05D007368 ORTHO05D009330 1.4e-43 180.3 136 71.3
Prupe.6G242800 Prunus persica HOM05D007368 ORTHO05D009330 4.1e-43 178.7 121 74.4
MD12G1126200 Malus domestica HOM05D007368 ORTHO05D009330 9.1e-43 177.6 155 65.2
Potri.016G084000 Populus trichocarpa HOM05D007368 ORTHO05D009330 7.7e-42 174.5 109 78.0
QL07p045528 Quercus lobata HOM05D007368 ORTHO05D009330 7.7e-42 174.5 151 64.2
GSVIVG01025542001 Vitis vinifera HOM05D007368 ORTHO05D009330 1.0e-41 174.1 147 63.9
SGA_v2.0_scaffold35G14174 Striga asiatica HOM05D007368 ORTHO05D009330 5.0e-41 171.8 118 72.9
Lalb_Chr01g0019071 Lupinus albus HOM05D007368 ORTHO05D009330 1.1e-40 170.6 145 62.1
Nn2g10623 Nelumbo nucifera HOM05D007368 ORTHO05D009330 1.4e-40 170.2 127 68.5
TAR623G0445 Trochodendron aralioides HOM05D007368 ORTHO05D009330 1.4e-40 170.2 117 70.1
FAN05G3151 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.9e-40 169.9 144 66.0
RhsimUnG0119200 Rhododendron simsii HOM05D007368 ORTHO05D009330 4.2e-40 168.7 152 61.8
Duzib106G0389 Durio zibethinus HOM05D007368 ORTHO05D009330 9.4e-40 167.5 143 62.9
Thecc.05G052500 Theobroma cacao HOM05D007368 ORTHO05D009330 9.4e-40 167.5 144 62.5
TWI18G0236 Tripterygium wilfordii HOM05D007368 ORTHO05D009330 9.4e-40 167.5 113 73.5
FAN02G4571 Fragaria x ananassa HOM05D007368 ORTHO05D009330 1.6e-39 166.8 140 65.0
SalBow4G2292 Salvia bowleyana HOM05D007368 ORTHO05D009330 1.6e-39 166.8 116 73.3
Gohir.D04G116100 Gossypium hirsutum HOM05D007368 ORTHO05D009330 2.1e-39 166.4 145 62.1
PGR004G1717 Punica granatum HOM05D007368 ORTHO05D009330 2.1e-39 166.4 116 74.1
CsaV3_3G035440 Cucumis sativus L. HOM05D007368 ORTHO05D009330 3.6e-39 165.6 119 70.6
Gohir.A04G077000 Gossypium hirsutum HOM05D007368 ORTHO05D009330 3.6e-39 165.6 144 61.1
CSS0023324 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 4.6e-39 165.2 93 83.9
MBI05_g24570_MAGBIO Magnolia biondii HOM05D007368 ORTHO05D009330 4.6e-39 165.2 111 70.3
ClCG10G020660 Citrullus lanatus HOM05D007368 ORTHO05D009330 1.0e-38 164.1 87 89.7
FvH4_6g15150 Fragaria vesca HOM05D007368 ORTHO05D009330 1.0e-38 164.1 145 64.1
Aa31LG10G9720 Aethionema arabicum HOM05D007368 ORTHO05D009330 2.3e-38 162.9 115 69.6
RcHm_v2.0_Chr3g0468451 Rosa chinensis HOM05D007368 ORTHO05D009330 2.3e-38 162.9 115 73.0
THA.LOC104806520 Tarenaya hassleriana HOM05D007368 ORTHO05D009330 5.1e-38 161.8 121 66.9
PSO384G2936 Papaver somniferum HOM05D007368 ORTHO05D009330 6.7e-38 161.4 145 59.3
MELO3C009303.2 Cucumis melo HOM05D007368 ORTHO05D009330 1.1e-37 160.6 113 70.8
vmacro20068 Vaccinium macrocarpon HOM05D007368 ORTHO05D009330 1.1e-37 160.6 88 86.4
Glyma.03G177200 Glycine max HOM05D007368 ORTHO05D009330 1.5e-37 160.2 146 63.0
Glyma.19G177900 Glycine max HOM05D007368 ORTHO05D009330 1.5e-37 160.2 149 61.1
Lsat_1_v5_gn_2_109820 Lactuca sativa HOM05D007368 ORTHO05D009330 1.5e-37 160.2 126 69.0
Medtr7g100570 Medicago truncatula HOM05D007368 ORTHO05D009330 1.5e-37 160.2 145 59.3
Peaxi162Scf00005g05110 Petunia axillaris HOM05D007368 ORTHO05D009330 2.0e-37 159.8 134 64.2
Nitab4.5_0000848g0200 Nicotiana tabacum HOM05D007368 ORTHO05D009330 2.6e-37 159.5 107 72.0
Gorai.009G420700 Gossypium raimondii HOM05D007368 ORTHO05D009330 4.4e-37 158.7 170 52.9
PSO339G6044 Papaver somniferum HOM05D007368 ORTHO05D009330 4.4e-37 158.7 128 62.5
Migut.L01655 Erythranthe guttata HOM05D007368 ORTHO05D009330 5.7e-37 158.3 141 61.0
Psat3g046880 Pisum sativum HOM05D007368 ORTHO05D009330 5.7e-37 158.3 144 61.1
FAN14G0355 Fragaria x ananassa HOM05D007368 ORTHO05D009330 7.4e-37 157.9 143 63.6
Os03g0285100 Oryza sativa ssp. japonica HOM05D007368 ORTHO05D009330 7.4e-37 157.9 111 71.2
Aqoxy4G03165 Aquilegia oxysepala HOM05D007368 ORTHO05D009330 9.7e-37 157.5 92 80.4
FAN09G3524 Fragaria x ananassa HOM05D007368 ORTHO05D009330 9.7e-37 157.5 132 64.4
Nitab4.5_0006316g0030 Nicotiana tabacum HOM05D007368 ORTHO05D009330 9.7e-37 157.5 107 72.0
AL5G34390 Arabidopsis lyrata HOM05D007368 ORTHO05D009330 1.7e-36 156.8 140 60.0
Thhalv10010814m.g Eutrema salsugineum HOM05D007368 ORTHO05D009330 2.2e-36 156.4 140 60.7
BcaC07g39711 Brassica carinata HOM05D007368 ORTHO05D009330 2.8e-36 156.0 140 59.3
C08p28830 Brassica napus HOM05D007368 ORTHO05D009330 2.8e-36 156.0 140 59.3
Cc06_g03400 Coffea canephora HOM05D007368 ORTHO05D009330 3.7e-36 155.6 121 67.8
Sabra16G0091100 Salix brachista HOM05D007368 ORTHO05D009330 3.7e-36 155.6 90 82.2
Lj1g0027781 Lotus japonicus HOM05D007368 ORTHO05D009330 6.3e-36 154.8 88 83.0
EL10Ac7g17332 Beta vulgaris HOM05D007368 ORTHO05D009330 1.1e-35 154.1 135 63.0
A09p46480 Brassica napus HOM05D007368 ORTHO05D009330 1.1e-35 154.1 140 58.6
BolC8t50485H Brassica oleracea HOM05D007368 ORTHO05D009330 1.8e-35 153.3 143 57.3
CANSAT80G2753 Cannabis sativa HOM05D007368 ORTHO05D009330 1.8e-35 153.3 91 83.5
HanXRQChr07g0195701 Helianthus annuus HOM05D007368 ORTHO05D009330 1.8e-35 153.3 128 62.5
Sp5g08870 Schrenkiella parvula HOM05D007368 ORTHO05D009330 1.8e-35 153.3 119 64.7
AT3G53470 Arabidopsis thaliana HOM05D007368 ORTHO05D009330 2.4e-35 152.9 141 60.3
BcaB01g00269 Brassica carinata HOM05D007368 ORTHO05D009330 2.4e-35 152.9 140 58.6
AUR62002707 Chenopodium quinoa HOM05D007368 ORTHO05D009330 4.1e-35 152.1 90 82.2
BraA09t40112Z Brassica rapa HOM05D007368 ORTHO05D009330 6.9e-35 151.4 143 56.6
CARHR163370 Cardamine hirsuta HOM05D007368 ORTHO05D009330 6.9e-35 151.4 127 61.4
Carub.0005s2004 Capsella rubella HOM05D007368 ORTHO05D009330 1.2e-34 150.6 142 57.0
Cpa.g.sc114.58 Carica papaya HOM05D007368 ORTHO05D009330 1.2e-34 150.6 127 64.6
VMungo1383G1325 Vigna mungo HOM05D007368 ORTHO05D009330 2.0e-34 149.8 139 60.4
Zm00001eb013060 Zea mays HOM05D007368 ORTHO05D009330 2.6e-34 149.4 111 67.6
A07p02830 Brassica napus HOM05D007368 ORTHO05D009330 7.7e-34 147.9 110 65.5
BraA07t28082Z Brassica rapa HOM05D007368 ORTHO05D009330 7.7e-34 147.9 110 65.5
Zm00001eb039440 Zea mays HOM05D007368 ORTHO05D009330 7.7e-34 147.9 108 68.5
Zm00001eb039470 Zea mays HOM05D007368 ORTHO05D009330 1.3e-33 147.1 106 68.9
Medtr7g061255 Medicago truncatula HOM05D007368 ORTHO05D009330 2.9e-33 146.0 87 79.3
Sc20g0004140 Simmondsia chinensis HOM05D007368 ORTHO05D009330 2.9e-33 146.0 96 75.0
Zm00001eb039540 Zea mays HOM05D007368 ORTHO05D009330 5.0e-33 145.2 108 67.6
CDE07G1273 Ceratophyllum demersum HOM05D007368 ORTHO05D009330 6.5e-33 144.8 138 54.3
HPP92_003604 Vanilla planifolia HOM05D007368 ORTHO05D009330 1.4e-32 143.7 112 63.4
CSS0022034 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 4.2e-32 142.1 88 79.5
BcaC03g13096 Brassica carinata HOM05D007368 ORTHO05D009330 7.2e-32 141.4 134 56.7
BolC2t05999H Brassica oleracea HOM05D007368 ORTHO05D009330 7.2e-32 141.4 134 56.7
Phvul.001G174100 Phaseolus vulgaris HOM05D007368 ORTHO05D009330 6.7e-30 134.8 90 75.6
AUR62030166 Chenopodium quinoa HOM05D007368 ORTHO05D009330 1.5e-29 133.7 66 90.9
Actinidia11231 Actinidia chinensis HOM05D007368 ORTHO05D009330 9.7e-29 131.0 125 56.0
Dinv37241 Davidia involucrata HOM05D007368 ORTHO05D009330 9.7e-29 131.0 66 87.9
arahy.Tifrunner.gnm1.ann1.FER711 Arachis hypogaea HOM05D007368 ORTHO05D009330 1.4e-27 127.1 82 73.2
arahy.Tifrunner.gnm1.ann1.XWNT9U Arachis hypogaea HOM05D007368 ORTHO05D009330 3.1e-27 125.9 71 80.3
Sopen09g002110 Solanum pennellii HOM05D007368 ORTHO05D009330 4.5e-26 122.1 137 54.0
Solyc09g007240.3 Solanum lycopersicum HOM05D007368 ORTHO05D009330 1.7e-25 120.2 137 53.3
SEGI_06625 Sequoiadendron giganteum HOM05D007368 ORTHO05D009330 5.5e-24 115.2 101 56.4
CSS0036054 Camellia sinensis var. sinensis HOM05D007368 ORTHO05D009330 8.0e-23 111.3 88 67.0
Sed0014476 Sechium edule HOM05D007368 ORTHO05D009330 5.2e-22 108.6 129 51.2
ECA238G4406 Erigeron canadensis HOM05D001465 ORTHO05D001434 7.0e-19 98.2 73 68.5
TAR369G0858 Trochodendron aralioides HOM05D000391 ORTHO05D011523 2.2e-12 76.6 78 53.8
Mapoly0019s0018 Marchantia polymorpha HOM05D007368 ORTHO05D009330 4.8e-12 75.5 101 44.6
Pp3c5_6130 Physcomitrium patens HOM05D007368 ORTHO05D009330 1.0e-09 67.8 108 39.8
SMO180G0004 Selaginella moellendorffii HOM05D007368 ORTHO05D009330 1.9e-08 63.5 80 37.5


User provided reference genes

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