Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 8.1e-93 343.6 157 100.0
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 2.6e-59 232.3 163 69.9
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 5.9e-59 231.1 164 69.5
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 5.9e-59 231.1 147 70.1
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 1.0e-58 230.3 148 68.2
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.7e-58 229.6 148 68.2
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 1.9e-57 226.1 158 64.6
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 9.3e-57 223.8 167 62.3
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 4.6e-56 221.5 165 61.2
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 6.1e-56 221.1 148 66.2
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 1.3e-55 219.9 128 75.8
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 1.8e-55 219.5 120 79.2
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 2.3e-55 219.2 161 61.5
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 2.5e-54 215.7 151 62.9
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.3e-53 213.4 159 61.6
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 1.6e-53 213.0 162 61.1
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 1.6e-53 213.0 137 70.1
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 2.2e-53 212.6 146 64.4
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 2.2e-53 212.6 146 64.4
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 2.2e-53 212.6 115 75.7
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 3.7e-53 211.8 146 64.4
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 4.8e-53 211.5 116 77.6
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 6.3e-53 211.1 150 64.7
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 6.3e-53 211.1 132 68.9
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 1.1e-52 210.3 116 75.9
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 1.1e-52 210.3 119 73.9
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.1e-52 210.3 146 63.0
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 1.1e-52 210.3 119 73.1
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 1.4e-52 209.9 119 72.3
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 1.4e-52 209.9 154 61.0
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 1.8e-52 209.5 149 63.1
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 2.4e-52 209.1 116 75.9
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 3.1e-52 208.8 159 57.9
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 4.1e-52 208.4 110 79.1
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 5.3e-52 208.0 149 63.8
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 6.9e-52 207.6 116 74.1
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 9.1e-52 207.2 118 72.9
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 2.0e-51 206.1 136 65.4
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 2.0e-51 206.1 118 73.7
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 2.6e-51 205.7 119 71.4
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 2.6e-51 205.7 127 68.5
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 2.6e-51 205.7 160 60.6
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 2.6e-51 205.7 120 72.5
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 3.4e-51 205.3 145 62.1
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 4.5e-51 204.9 156 60.3
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 5.9e-51 204.5 173 56.6
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 1.0e-50 203.8 118 72.0
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 1.3e-50 203.4 147 59.2
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 1.3e-50 203.4 157 60.5
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 2.2e-50 202.6 121 68.6
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 2.2e-50 202.6 119 73.9
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 3.8e-50 201.8 119 71.4
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 5.0e-50 201.4 116 72.4
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 6.5e-50 201.1 118 70.3
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 6.5e-50 201.1 118 70.3
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 6.5e-50 201.1 118 70.3
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 6.5e-50 201.1 119 72.3
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 1.1e-49 200.3 116 72.4
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.9e-49 199.5 129 65.1
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 1.9e-49 199.5 113 72.6
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 2.5e-49 199.1 118 69.5
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 2.5e-49 199.1 118 69.5
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 2.5e-49 199.1 120 68.3
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 3.2e-49 198.7 119 70.6
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 5.5e-49 198.0 118 71.2
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 5.5e-49 198.0 118 70.3
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 7.2e-49 197.6 163 54.6
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 9.4e-49 197.2 155 58.1
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 1.2e-48 196.8 120 69.2
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 2.7e-48 195.7 156 57.1
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 2.7e-48 195.7 120 67.5
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 3.6e-48 195.3 123 65.9
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 1.8e-47 193.0 120 69.2
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 2.3e-47 192.6 137 62.8
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 3.9e-47 191.8 119 71.4
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 1.3e-45 186.8 128 64.1
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 2.8e-45 185.7 163 54.6
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 5.3e-44 181.4 144 57.6
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 2.0e-43 179.5 108 67.6
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 1.3e-42 176.8 96 78.1
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 1.0e-39 167.2 102 68.6
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 3.0e-39 165.6 96 72.9
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 6.7e-39 164.5 110 60.9
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 1.1e-38 163.7 132 57.6
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 1.5e-38 163.3 96 69.8
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 4.4e-38 161.8 102 66.7
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 8.2e-37 157.5 84 77.4
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 2.4e-36 156.0 112 58.9
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 3.1e-36 155.6 114 60.5
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 3.1e-36 155.6 114 55.3
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 1.6e-35 153.3 129 55.8
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 1.6e-35 153.3 130 56.2
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 5.0e-34 148.3 114 58.8
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 3.2e-33 145.6 80 76.2
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.1e-28 130.6 82 65.9
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 8.0e-24 114.4 61 72.1
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 4.2e-17 92.0 56 71.4
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 3.6e-16 89.0 75 61.3
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 2.4e-12 76.3 120 33.3
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 1.2e-11 73.9 40 75.0
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 1.0e-10 70.9 80 46.2


User provided reference genes

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