Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G142750 Manihot esculenta HOM05D001184 ORTHO05D008450 1.0e-99 366.7 176 100.0
Manes.07G141100 Manihot esculenta HOM05D001184 ORTHO05D008450 2.3e-51 206.1 101 100.0
Manes.07G143201 Manihot esculenta HOM05D001184 ORTHO05D008450 2.3e-51 206.1 101 100.0
Manes.07G144101 Manihot esculenta HOM05D001184 ORTHO05D008450 5.0e-51 204.9 101 99.0
Potri.019G058700 Populus trichocarpa HOM05D001184 ORTHO05D008450 5.4e-37 158.3 100 77.0
Sabra19G0074000 Salix brachista HOM05D001184 ORTHO05D008450 7.8e-36 154.5 100 76.0
Duzib128G0215 Durio zibethinus HOM05D001184 ORTHO05D008450 8.9e-32 141.0 100 70.0
Thecc.10G179100 Theobroma cacao HOM05D001184 ORTHO05D008450 3.4e-31 139.0 100 70.0
Gohir.A10G180150 Gossypium hirsutum HOM05D001184 ORTHO05D008450 2.2e-30 136.3 100 71.0
QL08p064889 Quercus lobata HOM05D001184 ORTHO05D008450 2.9e-30 136.0 100 65.0
Gohir.D10G187100 Gossypium hirsutum HOM05D001184 ORTHO05D008450 6.4e-30 134.8 100 70.0
Gorai.011G209900 Gossypium raimondii HOM05D001184 ORTHO05D008450 6.4e-30 134.8 100 70.0
Ciclev10031719m.g Citrus clementina HOM05D001184 ORTHO05D008450 2.4e-29 132.9 100 64.0
Cfa001206 Carpinus fangiana HOM05D001184 ORTHO05D008450 2.1e-28 129.8 100 62.0
Eucgr.J00111 Eucalyptus grandis HOM05D001184 ORTHO05D008450 2.1e-28 129.8 100 62.0
TWI73G1243 Tripterygium wilfordii HOM05D001184 ORTHO05D008450 3.5e-28 129.0 97 62.9
Atru.chr12.216 Acer truncatum HOM05D001184 ORTHO05D008450 3.9e-27 125.6 100 61.0
TAR623G1554 Trochodendron aralioides HOM05D001184 ORTHO05D008450 3.9e-27 125.6 100 59.0
CANSAT56G1814 Cannabis sativa HOM05D001184 ORTHO05D008450 4.3e-26 122.1 100 61.0
COL.COLO4_19421 Corchorus olitorius HOM05D001184 ORTHO05D008450 4.3e-26 122.1 100 62.0
MD07G1234000 Malus domestica HOM05D001184 ORTHO05D008450 4.3e-26 122.1 100 56.0
Hund13448 Selenicereus undatus HOM05D001184 ORTHO05D008450 5.6e-26 121.7 100 59.0
GSVIVG01032669001 Vitis vinifera HOM05D001184 ORTHO05D008450 7.3e-26 121.3 100 59.0
CsaV3_5G011010 Cucumis sativus L. HOM05D001184 ORTHO05D008450 1.6e-25 120.2 95 62.1
MD01G1168000 Malus domestica HOM05D001184 ORTHO05D008450 1.6e-25 120.2 100 55.0
Sp4g22990 Schrenkiella parvula HOM05D001184 ORTHO05D008450 1.6e-25 120.2 101 54.5
Sed0004820 Sechium edule HOM05D001184 ORTHO05D008450 2.8e-25 119.4 95 57.9
FAN10G0995 Fragaria x ananassa HOM05D001184 ORTHO05D008450 3.6e-25 119.0 100 58.0
ClCG07G005160 Citrullus lanatus HOM05D001184 ORTHO05D008450 8.1e-25 117.9 112 53.6
Dinv34490 Davidia involucrata HOM05D001184 ORTHO05D008450 1.1e-24 117.5 100 59.0
Thhalv10016505m.g Eutrema salsugineum HOM05D001184 ORTHO05D008450 1.1e-24 117.5 100 54.0
C04p02140 Brassica napus HOM05D001184 ORTHO05D008450 1.8e-24 116.7 101 53.5
BolC4t21862H Brassica oleracea HOM05D001184 ORTHO05D008450 1.8e-24 116.7 101 53.5
FAN01G0629 Fragaria x ananassa HOM05D001184 ORTHO05D008450 1.8e-24 116.7 100 57.0
Glyma.06G142400 Glycine max HOM05D001184 ORTHO05D008450 1.8e-24 116.7 100 57.0
Carub.0004s2295 Capsella rubella HOM05D001184 ORTHO05D008450 2.4e-24 116.3 100 54.0
Nn2g10295 Nelumbo nucifera HOM05D001184 ORTHO05D008450 3.1e-24 115.9 99 55.6
FvH4_7g25960 Fragaria vesca HOM05D001184 ORTHO05D008450 4.0e-24 115.5 100 57.0
FAN03G2754 Fragaria x ananassa HOM05D001184 ORTHO05D008450 4.0e-24 115.5 100 56.0
Prupe.2G264400 Prunus persica HOM05D001184 ORTHO05D008450 4.0e-24 115.5 100 55.0
AL4G38530 Arabidopsis lyrata HOM05D001184 ORTHO05D008450 5.2e-24 115.2 100 54.0
EL10Ac2g02652 Beta vulgaris HOM05D001184 ORTHO05D008450 6.9e-24 114.8 100 56.0
AUR62024937 Chenopodium quinoa HOM05D001184 ORTHO05D008450 1.2e-23 114.0 100 56.0
AUR62030607 Chenopodium quinoa HOM05D001184 ORTHO05D008450 1.2e-23 114.0 100 55.0
Phvul.009G043500 Phaseolus vulgaris HOM05D001184 ORTHO05D008450 1.2e-23 114.0 100 55.0
BcaC02g12728 Brassica carinata HOM05D001184 ORTHO05D008450 1.5e-23 113.6 101 52.5
Glyma.04G222900 Glycine max HOM05D001184 ORTHO05D008450 1.5e-23 113.6 100 55.0
MBI15_g01604_MAGBIO Magnolia biondii HOM05D001184 ORTHO05D008450 2.6e-23 112.8 100 53.0
Medtr3g093870 Medicago truncatula HOM05D001184 ORTHO05D008450 2.6e-23 112.8 100 54.0
A05p01840 Brassica napus HOM05D001184 ORTHO05D008450 3.4e-23 112.5 101 51.5
BraA05t19182Z Brassica rapa HOM05D001184 ORTHO05D008450 3.4e-23 112.5 101 51.5
CARHR135770 Cardamine hirsuta HOM05D001184 ORTHO05D008450 3.4e-23 112.5 100 53.0
AT2G40660 Arabidopsis thaliana HOM05D001184 ORTHO05D008450 4.4e-23 112.1 100 53.0
CiPaw.04G147400 Carya illinoinensis HOM05D001184 ORTHO05D008450 4.4e-23 112.1 100 55.0
Ca_16863_v3 Cicer arietinum L. HOM05D001184 ORTHO05D008450 4.4e-23 112.1 100 55.0
Lj1g0025527 Lotus japonicus HOM05D001184 ORTHO05D008450 9.9e-23 110.9 100 54.0
Lalb_Chr11g0067771 Lupinus albus HOM05D001184 ORTHO05D008450 1.7e-22 110.2 100 56.0
Lalb_Chr08g0239191 Lupinus albus HOM05D001184 ORTHO05D008450 2.2e-22 109.8 100 55.0
Solyc06g048610.3 Solanum lycopersicum HOM05D001184 ORTHO05D008450 3.8e-22 109.0 101 54.5
Nitab4.5_0006093g0010 Nicotiana tabacum HOM05D001184 ORTHO05D008450 4.9e-22 108.6 101 54.5
Sopen06g014800 Solanum pennellii HOM05D001184 ORTHO05D008450 4.9e-22 108.6 101 53.5
VMungo1309G2858 Vigna mungo HOM05D001184 ORTHO05D008450 4.9e-22 108.6 100 55.0
CSS0018804 Camellia sinensis var. sinensis HOM05D001184 ORTHO05D008450 6.4e-22 108.2 84 61.9
TPR.G23230 Trifolium pratense HOM05D001184 ORTHO05D008450 8.4e-22 107.8 100 53.0
arahy.Tifrunner.gnm1.ann1.1BRL89 Arachis hypogaea HOM05D001184 ORTHO05D008450 1.1e-21 107.5 100 53.0
Sc11g0005860 Simmondsia chinensis HOM05D001184 ORTHO05D008450 1.1e-21 107.5 98 54.1
Lj1A967T43 Lonicera japonica HOM05D001184 ORTHO05D008450 1.4e-21 107.1 80 60.0
DCAR_020150 Daucus carota HOM05D001184 ORTHO05D008450 1.9e-21 106.7 100 53.0
THA.LOC104803210 Tarenaya hassleriana HOM05D001184 ORTHO05D008450 1.9e-21 106.7 99 51.5
Aa31LG3G1460 Aethionema arabicum HOM05D001184 ORTHO05D008450 2.4e-21 106.3 100 55.0
Actinidia13646 Actinidia chinensis HOM05D001184 ORTHO05D008450 4.2e-21 105.5 100 56.0
Psat5g068320 Pisum sativum HOM05D001184 ORTHO05D008450 4.2e-21 105.5 100 53.0
Ah.12g064390 Amaranthus hybridus HOM05D001184 ORTHO05D008450 5.4e-21 105.1 109 48.6
Cpa.g.sc19.53 Carica papaya HOM05D001184 ORTHO05D008450 5.4e-21 105.1 99 55.6
CDE12G0518 Ceratophyllum demersum HOM05D001184 ORTHO05D008450 9.3e-21 104.4 100 48.0
Oeu054416.1 Olea europaea HOM05D001184 ORTHO05D008450 9.3e-21 104.4 100 55.0
Rhsim03G0152900 Rhododendron simsii HOM05D001184 ORTHO05D008450 1.2e-20 104.0 80 62.5
MSTRG.168 Avicennia marina HOM05D001184 ORTHO05D008450 2.1e-20 103.2 100 54.0
PGR044G0579 Punica granatum HOM05D001184 ORTHO05D008450 2.1e-20 103.2 83 57.8
RcHm_v2.0_Chr1g0372341 Rosa chinensis HOM05D001184 ORTHO05D008450 6.0e-20 101.7 82 56.1
CAN.G17.14 Capsicum annuum HOM05D001184 ORTHO05D008450 7.8e-20 101.3 92 52.2
Nitab4.5_0000094g0120 Nicotiana tabacum HOM05D001184 ORTHO05D008450 7.8e-20 101.3 101 48.5
HanXRQChr14g0460711 Helianthus annuus HOM05D001184 ORTHO05D008450 1.3e-19 100.5 100 49.0
Lsat_1_v5_gn_2_126320 Lactuca sativa HOM05D001184 ORTHO05D008450 1.3e-19 100.5 84 52.4
Cc02_g05330 Coffea canephora HOM05D001184 ORTHO05D008450 1.7e-19 100.1 100 46.0
vmacro06895 Vaccinium macrocarpon HOM05D001184 ORTHO05D008450 3.0e-19 99.4 100 52.0
Aqoxy2G00714 Aquilegia oxysepala HOM05D001184 ORTHO05D008450 5.1e-19 98.6 98 48.0
Migut.F00609 Erythranthe guttata HOM05D001184 ORTHO05D008450 4.3e-18 95.5 99 49.5
ECA238G2482 Erigeron canadensis HOM05D001184 ORTHO05D008450 6.2e-17 91.7 100 43.0
SHI28911 Sapria himalayana HOM05D001184 ORTHO05D008450 1.1e-16 90.9 79 59.5
SEGI_14061 Sequoiadendron giganteum HOM05D001184 ORTHO05D008450 1.8e-16 90.1 102 43.1
ATR1127G003 Amborella trichopoda HOM05D001184 ORTHO05D008450 3.1e-16 89.4 100 44.0
PSO339G5039 Papaver somniferum HOM05D001184 ORTHO05D008450 4.0e-16 89.0 100 46.0
Os01g0821800 Oryza sativa ssp. japonica HOM05D001184 ORTHO05D008450 6.9e-16 88.2 100 46.0
PSO384G4419 Papaver somniferum HOM05D001184 ORTHO05D008450 9.0e-16 87.8 94 44.7
MELO3C020154.2 Cucumis melo HOM05D001184 ORTHO05D008450 3.4e-15 85.9 73 57.5
SGA_v2.0_scaffold44G16623 Striga asiatica HOM05D001184 ORTHO05D008450 4.5e-15 85.5 80 48.8
HPP92_015593 Vanilla planifolia HOM05D001184 ORTHO05D008450 1.3e-14 84.0 92 43.5
SalBow3G0802 Salvia bowleyana HOM05D001184 ORTHO05D008450 2.2e-14 83.2 109 43.1
unitig_578.g16605 Utricularia gibba HOM05D001184 ORTHO05D008450 4.6e-12 75.5 92 42.4
FAN06G0458 Fragaria x ananassa HOM05D001184 ORTHO05D008450 6.7e-11 71.6 100 45.0
Zm00001eb368820 Zea mays HOM05D001184 ORTHO05D008450 1.9e-10 70.1 78 46.2
AagrBONN_evm.TU.Sc2ySwM_344.629 Anthoceros agrestis HOM05D001184 ORTHO05D008450 5.3e-08 62.0 81 38.3
Haze_17360 Corylus avellana HOM05D001184 ORTHO05D008450 2.6e-07 59.7 54 57.4
Psat1g168480 Pisum sativum HOM05D001184 ORTHO05D008450 5.8e-07 58.5 58 48.3
SMO171G0122 Selaginella moellendorffii HOM05D001184 ORTHO05D008450 5.8e-07 58.5 78 35.9
SMO353G0071 Selaginella moellendorffii HOM05D001184 ORTHO05D008450 9.9e-07 57.8 78 35.9


User provided reference genes

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