Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G140000 Manihot esculenta HOM05D009064 ORTHO05D010640 2.7e-62 241.9 127 100.0
Sabra13G0079500 Salix brachista HOM05D009064 ORTHO05D010640 5.9e-17 91.3 127 50.4
Cfa001215 Carpinus fangiana HOM05D009064 ORTHO05D010640 1.0e-16 90.5 128 50.0
COL.COLO4_19449 Corchorus olitorius HOM05D009064 ORTHO05D010640 1.1e-15 87.0 127 47.2
TAR623G0979 Trochodendron aralioides HOM05D009064 ORTHO05D010640 1.2e-14 83.6 121 46.3
Ciclev10033100m.g Citrus clementina HOM05D009064 ORTHO05D010640 6.1e-14 81.3 134 47.8
Potri.013G083500 Populus trichocarpa HOM05D009064 ORTHO05D010640 1.8e-13 79.7 126 46.0
Haze_17348 Corylus avellana HOM05D009064 ORTHO05D010640 3.9e-13 78.6 124 47.6
Manes.10G000157 Manihot esculenta HOM05D051481 ORTHO05D010640 6.7e-13 77.8 104 48.1
Rhsim03G0151100 Rhododendron simsii HOM05D009064 ORTHO05D010640 6.7e-13 77.8 113 46.9
Glyma.06G144000 Glycine max HOM05D009064 ORTHO05D010640 8.8e-13 77.4 124 49.2
Hma1.2p1_2086F.1_g313715 Hydrangea macrophylla HOM05D009064 ORTHO05D010640 8.8e-13 77.4 128 47.7
CiPaw.01G305700 Carya illinoinensis HOM05D009064 ORTHO05D010640 4.3e-12 75.1 132 47.0
Duzib114G0015 Durio zibethinus HOM05D009064 ORTHO05D010640 1.7e-11 73.2 131 43.5
QL08p064693 Quercus lobata HOM05D026914 ORTHO05D010640 1.4e-10 70.1 120 45.0
Thecc.10G183500 Theobroma cacao HOM05D009064 ORTHO05D010640 2.4e-10 69.3 123 42.3
CSS0028995 Camellia sinensis var. sinensis HOM05D020056 ORTHO05D010640 3.4e-09 65.5 129 45.7
Dinv26058 Davidia involucrata HOM05D009064 ORTHO05D010640 4.5e-09 65.1 97 48.5
CSS0018674 Camellia sinensis var. sinensis HOM05D020056 ORTHO05D010640 1.0e-08 63.9 129 44.2
Gorai.009G292900 Gossypium raimondii HOM05D009064 ORTHO05D010640 1.7e-08 63.2 132 43.9
Prupe.2G262900 Prunus persica HOM05D025368 ORTHO05D010640 2.2e-08 62.8 122 37.7
Gohir.D05G279400 Gossypium hirsutum HOM05D009064 ORTHO05D010640 5.0e-08 61.6 132 43.9
Nn2g10339 Nelumbo nucifera HOM05D009064 ORTHO05D010640 6.5e-08 61.2 125 38.4
Gohir.D13G007500 Gossypium hirsutum HOM05D009064 ORTHO05D010640 1.4e-07 60.1 140 40.0
Gohir.A13G007400 Gossypium hirsutum HOM05D009064 ORTHO05D010640 1.9e-07 59.7 141 38.3
Manes.10G004500 Manihot esculenta HOM05D051481 ORTHO05D250811 1.9e-07 59.7 116 43.1
QL02p068966 Quercus lobata HOM05D026914 ORTHO05D010640 1.9e-07 59.7 127 39.4
Gorai.013G007900 Gossypium raimondii HOM05D009064 ORTHO05D010640 2.5e-07 59.3 140 40.0
Medtr3g094130 Medicago truncatula HOM05D009064 ORTHO05D010640 4.2e-07 58.5 113 41.6
Glyma.04G221450 Glycine max HOM05D009064 ORTHO05D010640 5.5e-07 58.2 95 38.9
Phvul.009G142200 Phaseolus vulgaris HOM05D009064 ORTHO05D010640 7.2e-07 57.8 130 40.0
QL08p064721 Quercus lobata HOM05D026914 ORTHO05D010640 7.2e-07 57.8 117 38.5
QL08p064688 Quercus lobata HOM05D005830 ORTHO05D007212 9.4e-07 57.4 110 40.0
Aqoxy4G02368 Aquilegia oxysepala HOM05D009064 ORTHO05D010640 1.2e-06 57.0 113 37.2
Gohir.A05G277832 Gossypium hirsutum HOM05D009064 ORTHO05D010640 4.7e-06 55.1 127 38.6
ClCG11G005720 Citrullus lanatus HOM05D025422 ORTHO05D025107 7.9e-06 54.3 127 35.4


User provided reference genes

Program Settings