Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 6.5e-90 334.0 158 100.0
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 9.2e-36 154.1 172 49.4
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 1.3e-34 150.2 158 51.3
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 2.3e-34 149.4 151 51.7
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 5.6e-33 144.8 150 52.7
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 9.5e-33 144.1 151 51.0
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 1.2e-32 143.7 192 46.9
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 1.6e-32 143.3 130 54.6
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 2.1e-32 142.9 189 46.6
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 2.8e-32 142.5 158 48.1
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 3.6e-32 142.1 133 55.6
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 6.1e-32 141.4 133 55.6
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 8.0e-32 141.0 171 46.2
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 2.3e-31 139.4 194 43.8
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 5.2e-31 138.3 152 50.7
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 8.9e-31 137.5 155 51.6
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 1.2e-30 137.1 165 46.1
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 1.5e-30 136.7 152 52.0
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 2.6e-30 136.0 151 48.3
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 4.4e-30 135.2 140 52.1
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 1.7e-29 133.3 149 49.0
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 2.9e-29 132.5 152 50.0
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 2.9e-29 132.5 152 50.0
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 2.9e-29 132.5 165 47.3
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 3.7e-29 132.1 149 45.6
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 8.3e-29 131.0 191 41.4
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 1.1e-28 130.6 147 46.3
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 1.8e-28 129.8 151 45.7
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 1.8e-28 129.8 144 47.2
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 5.4e-28 128.3 161 44.7
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 7.0e-28 127.9 186 40.9
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 9.2e-28 127.5 199 42.2
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.6e-27 126.7 152 48.0
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 1.6e-27 126.7 188 43.1
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.0e-27 126.3 152 48.7
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 2.7e-27 125.9 152 48.7
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 4.6e-27 125.2 187 41.7
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 5.9e-27 124.8 185 41.1
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 5.9e-27 124.8 131 48.1
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 7.8e-27 124.4 152 46.1
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 1.7e-26 123.2 147 44.2
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 2.3e-26 122.9 164 40.9
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 3.0e-26 122.5 151 45.0
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 5.0e-26 121.7 151 44.4
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 5.0e-26 121.7 182 40.1
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 1.1e-25 120.6 186 41.4
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 1.1e-25 120.6 186 41.4
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 1.1e-25 120.6 197 39.1
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 1.1e-25 120.6 157 43.9
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 3.3e-25 119.0 196 36.2
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 3.3e-25 119.0 144 45.1
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 5.6e-25 118.2 161 41.6
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 5.6e-25 118.2 181 38.1
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 7.3e-25 117.9 161 42.9
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 9.5e-25 117.5 187 38.0
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 9.5e-25 117.5 151 43.0
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.2e-24 117.1 187 38.5
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 1.6e-24 116.7 152 47.4
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 1.6e-24 116.7 149 44.3
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 2.8e-24 115.9 161 41.6
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 4.7e-24 115.2 154 42.2
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 6.2e-24 114.8 150 43.3
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 6.2e-24 114.8 195 36.9
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 1.0e-23 114.0 146 44.5
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 1.4e-23 113.6 80 73.8
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 1.8e-23 113.2 195 36.4
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 2.3e-23 112.8 190 37.9
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 2.3e-23 112.8 171 36.3
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 8.9e-23 110.9 98 57.1
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 2.0e-22 109.8 183 36.1
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 2.6e-22 109.4 141 41.8
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 4.4e-22 108.6 158 37.3
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 4.4e-22 108.6 147 40.1
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 5.8e-22 108.2 248 33.9
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 5.8e-22 108.2 171 38.6
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 7.5e-22 107.8 161 37.9
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 9.8e-22 107.5 163 36.2
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 9.8e-22 107.5 160 40.6
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 1.7e-21 106.7 159 39.6
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 2.2e-21 106.3 195 33.3
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 4.9e-21 105.1 153 37.9
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 4.9e-21 105.1 167 37.7
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 6.4e-21 104.8 193 35.8
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 1.4e-20 103.6 160 37.5
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 9.2e-20 100.9 160 36.9
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 1.2e-19 100.5 161 36.6
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 1.2e-19 100.5 161 36.6
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 2.7e-19 99.4 157 36.9
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 3.5e-19 99.0 196 34.2
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 4.6e-19 98.6 150 38.0
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 3.3e-17 92.4 160 34.4
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 7.3e-17 91.3 83 54.2
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 9.5e-17 90.9 187 31.6
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 2.1e-16 89.7 110 46.4
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 2.8e-16 89.4 119 47.1
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 5.8e-14 81.6 119 42.9
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 1.3e-13 80.5 247 27.5
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 3.7e-13 79.0 180 30.0
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 8.3e-13 77.8 149 33.6
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 2.4e-12 76.3 165 30.3
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 3.0e-10 69.3 142 30.3
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 3.9e-10 68.9 166 30.1
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 1.5e-09 67.0 81 51.9
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 1.9e-09 66.6 80 48.8
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 2.5e-09 66.2 81 49.4
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 3.3e-09 65.9 124 39.5
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 4.3e-09 65.5 116 38.8
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 4.3e-09 65.5 98 41.8
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 9.5e-09 64.3 97 44.3
Lsat_1_v5_gn_5_133280 Lactuca sativa HOM05D005717 ORTHO05D007221 2.1e-08 63.2 80 43.8
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 3.6e-08 62.4 80 45.0
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 1.4e-07 60.5 80 43.8
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 1.8e-07 60.1 93 40.9
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 3.1e-07 59.3 81 43.2
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 3.1e-07 59.3 80 42.5
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 5.2e-07 58.5 201 25.9


User provided reference genes

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