Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G133012 Manihot esculenta HOM05D007663 ORTHO05D009455 5.5e-74 282.0 301 100.0
Manes.11G152127 Manihot esculenta HOM05D007663 ORTHO05D009455 2.8e-65 253.1 196 92.3
Manes.11G152170 Manihot esculenta HOM05D007663 ORTHO05D009455 4.0e-64 249.2 196 95.9
Manes.11G152176 Manihot esculenta HOM05D007663 ORTHO05D009455 4.0e-64 249.2 196 95.9
Manes.11G152141 Manihot esculenta HOM05D007663 ORTHO05D009455 9.8e-63 244.6 196 89.8
Manes.07G134100 Manihot esculenta HOM05D007663 ORTHO05D009455 5.6e-58 228.8 301 71.4
Manes.07G064632 Manihot esculenta HOM05D007663 ORTHO05D009455 2.1e-57 226.9 301 85.0
Manes.11G152042 Manihot esculenta HOM05D007663 ORTHO05D009455 4.9e-54 215.7 287 61.7
Manes.11G152105 Manihot esculenta HOM05D007663 ORTHO05D009455 4.1e-45 186.0 93 97.8
Manes.11G152190 Manihot esculenta HOM05D007663 ORTHO05D009455 1.2e-44 184.5 93 96.8
Manes.11G152184 Manihot esculenta HOM05D007663 ORTHO05D009455 1.6e-44 184.1 93 96.8
Manes.05G009249 Manihot esculenta HOM05D007663 ORTHO05D009455 5.6e-42 175.6 94 93.6
Sabra10G0142400 Salix brachista HOM05D007663 ORTHO05D009455 6.8e-40 168.7 196 71.9
TWI73G0671 Tripterygium wilfordii HOM05D007663 ORTHO05D009455 1.9e-37 160.6 198 70.7
Duzib128G1882 Durio zibethinus HOM05D007663 ORTHO05D009455 4.6e-36 156.0 203 68.5
QL08p063638 Quercus lobata HOM05D007663 ORTHO05D009455 7.8e-36 155.2 198 61.1
Cpa.g.sc65.132 Carica papaya HOM05D007663 ORTHO05D009455 1.7e-35 154.1 201 65.7
Cfa001285 Carpinus fangiana HOM05D000718 ORTHO05D006723 3.3e-34 149.8 196 65.8
CiPaw.01G301100 Carya illinoinensis HOM05D007663 ORTHO05D009455 1.6e-33 147.5 195 70.8
Dinv21764 Davidia involucrata HOM05D007663 ORTHO05D009455 2.1e-33 147.1 199 63.8
TAR633G2105 Trochodendron aralioides HOM05D007663 ORTHO05D009455 8.1e-33 145.2 199 59.3
CANSAT56G3657 Cannabis sativa HOM05D007663 ORTHO05D009455 1.4e-32 144.4 198 63.6
Haze_17265 Corylus avellana HOM05D007663 ORTHO05D009455 1.4e-32 144.4 207 57.5
Nn2g10961 Nelumbo nucifera HOM05D007663 ORTHO05D009455 2.0e-31 140.6 201 56.7
COL.COLO4_25779 Corchorus olitorius HOM05D007663 ORTHO05D009455 1.3e-30 137.9 205 65.4
GSVIVG01032765001 Vitis vinifera HOM05D007663 ORTHO05D009455 4.9e-30 136.0 196 42.3
Gohir.D04G070200 Gossypium hirsutum HOM05D007663 ORTHO05D009455 8.4e-30 135.2 205 64.9
Gorai.012G078700 Gossypium raimondii HOM05D007663 ORTHO05D009455 8.4e-30 135.2 205 64.9
Cc02_g05740 Coffea canephora HOM05D007663 ORTHO05D009455 3.2e-29 133.3 199 51.3
Gohir.A05G331600 Gossypium hirsutum HOM05D007663 ORTHO05D009455 1.2e-28 131.3 205 63.9
Potri.010G185200 Populus trichocarpa HOM05D007663 ORTHO05D009455 1.2e-28 131.3 196 67.3
Migut.F00643 Erythranthe guttata HOM05D007663 ORTHO05D009455 1.0e-27 128.3 198 55.1
Ciclev10031427m.g Citrus clementina HOM05D007663 ORTHO05D009455 8.7e-27 125.2 210 60.5
vmacro17693 Vaccinium macrocarpon HOM05D007663 ORTHO05D009455 8.7e-27 125.2 201 55.2
CSS0001014 Camellia sinensis var. sinensis HOM05D007663 ORTHO05D009455 1.1e-26 124.8 201 55.2
CSS0017188 Camellia sinensis var. sinensis HOM05D007663 ORTHO05D009455 1.1e-26 124.8 201 55.2
Thecc.10G011700 Theobroma cacao HOM05D007663 ORTHO05D009455 7.3e-26 122.1 99 59.6
Nitab4.5_0000409g0130 Nicotiana tabacum HOM05D007663 ORTHO05D009455 1.6e-25 120.9 200 51.5
MBI15_g12399_MAGBIO Magnolia biondii HOM05D007663 ORTHO05D009455 2.1e-25 120.6 225 48.9
Rhsim03G0146000 Rhododendron simsii HOM05D007663 ORTHO05D009455 4.8e-25 119.4 201 54.2
Lsat_1_v5_gn_2_124440 Lactuca sativa HOM05D007663 ORTHO05D009455 1.1e-24 118.2 200 50.5
SalBow3G1672 Salvia bowleyana HOM05D007663 ORTHO05D009455 1.8e-24 117.5 198 55.6
HanXRQChr14g0459391 Helianthus annuus HOM05D007663 ORTHO05D009455 2.4e-24 117.1 199 50.8
ECA238G2021 Erigeron canadensis HOM05D007663 ORTHO05D009455 3.1e-24 116.7 199 55.8
PGSC0003DMG400027722 Solanum tuberosum HOM05D007663 ORTHO05D009455 3.1e-24 116.7 200 52.5
Aqoxy2G00815 Aquilegia oxysepala HOM05D007663 ORTHO05D009455 5.3e-24 115.9 200 62.0
CAN.G156.14 Capsicum annuum HOM05D007663 ORTHO05D009455 3.4e-23 113.2 200 51.5
Solyc03g095860.3 Solanum lycopersicum HOM05D007663 ORTHO05D009455 7.6e-23 112.1 200 50.5
Sopen03g025840 Solanum pennellii HOM05D007663 ORTHO05D009455 6.4e-22 109.0 200 48.0
Nitab4.5_0001222g0010 Nicotiana tabacum HOM05D007663 ORTHO05D009455 5.4e-21 105.9 199 50.3
Atru.chr12.76 Acer truncatum HOM05D007663 ORTHO05D009455 1.8e-19 100.9 96 55.2
Manes.07G133005 Manihot esculenta HOM05D007663 ORTHO05D009455 5.1e-19 99.4 245 75.1
CANSAT35G1813 Cannabis sativa HOM05D007663 ORTHO05D009455 1.9e-18 97.4 135 71.9
Actinidia33912 Actinidia chinensis HOM05D007663 ORTHO05D009455 5.6e-18 95.9 95 54.7
vmacro06952 Vaccinium macrocarpon HOM05D007663 ORTHO05D009455 1.3e-17 94.7 96 54.2
Manes.07G064566 Manihot esculenta HOM05D000718 ORTHO05D009455 3.1e-16 90.1 44 100.0
MSTRG.27307 Avicennia marina HOM05D007663 ORTHO05D009455 1.5e-15 87.8 197 46.7
DCAR_010462 Daucus carota HOM05D007663 ORTHO05D009455 4.9e-14 82.8 164 51.2
MD01G1157100 Malus domestica HOM05D007663 ORTHO05D009455 8.4e-14 82.0 196 35.2
Prupe.2G254900 Prunus persica HOM05D007663 ORTHO05D009455 6.0e-12 75.9 198 31.8
Os01g0829100 Oryza sativa ssp. japonica HOM05D007663 ORTHO05D009455 2.3e-11 73.9 164 33.5
Peaxi162Scf00304g00013 Petunia axillaris HOM05D007663 ORTHO05D009455 3.9e-11 73.2 93 46.2
Zm00001eb368510 Zea mays HOM05D007663 ORTHO05D009455 1.1e-10 71.6 178 33.1
RcHm_v2.0_Chr1g0370871 Rosa chinensis HOM05D007663 ORTHO05D009455 1.4e-08 64.7 196 32.1
Lj8A63T91 Lonicera japonica HOM05D007663 ORTHO05D009455 3.1e-08 63.5 94 42.6
Atru.chr12.71 Acer truncatum HOM05D007663 ORTHO05D009455 1.2e-07 61.6 95 40.0
Ca_05987_v3 Cicer arietinum L. HOM05D007663 ORTHO05D009455 1.5e-07 61.2 47 57.4
TPR.G38411 Trifolium pratense HOM05D007663 ORTHO05D009455 2.0e-07 60.8 47 57.4
FvH4_2g24420 Fragaria vesca HOM05D007464 ORTHO05D009388 2.6e-07 60.5 162 57.4
FAN24G2954 Fragaria x ananassa HOM05D007464 ORTHO05D009388 2.6e-07 60.5 162 57.4
Oeu059718.1 Olea europaea HOM05D007663 ORTHO05D009455 2.6e-07 60.5 49 59.2
Medtr8g056020 Medicago truncatula HOM05D007663 ORTHO05D009455 5.8e-07 59.3 47 55.3
Lalb_Chr04g0250441 Lupinus albus HOM05D007663 ORTHO05D009455 1.3e-06 58.2 44 61.4
FAN15G0926 Fragaria x ananassa HOM05D007464 ORTHO05D009388 1.7e-06 57.8 162 55.6
FAN20G1108 Fragaria x ananassa HOM05D007464 ORTHO05D009388 2.9e-06 57.0 162 54.9
FAN27G3498 Fragaria x ananassa HOM05D007464 ORTHO05D009388 8.4e-06 55.5 162 54.9
HanXRQChr16g0523171 Helianthus annuus HOM05D007663 ORTHO05D009455 8.4e-06 55.5 92 40.2
PGR044G1292 Punica granatum HOM05D007663 ORTHO05D009455 8.4e-06 55.5 42 61.9


User provided reference genes

Program Settings