Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G111600 Manihot esculenta HOM05D006938 ORTHO05D008600 7.8e-115 417.2 212 100.0
Manes.10G035800 Manihot esculenta HOM05D006938 ORTHO05D008600 1.0e-58 230.7 173 69.9
Potri.002G062100 Populus trichocarpa HOM05D006938 ORTHO05D008600 2.0e-54 216.5 194 63.9
Potri.005G199000 Populus trichocarpa HOM05D006938 ORTHO05D008600 5.0e-53 211.8 194 60.8
Thecc.03G060300 Theobroma cacao HOM05D006938 ORTHO05D008600 1.9e-52 209.9 216 57.9
Sabra02G0050200 Salix brachista HOM05D006938 ORTHO05D008600 7.2e-52 208.0 212 57.5
Duzib084G0622 Durio zibethinus HOM05D006938 ORTHO05D008600 1.4e-50 203.8 209 58.4
TAR629G2816 Trochodendron aralioides HOM05D006938 ORTHO05D008600 4.8e-48 195.3 208 56.7
arahy.Tifrunner.gnm1.ann1.ZPRB1V Arachis hypogaea HOM05D006938 ORTHO05D008600 1.5e-46 190.3 205 55.6
Ciclev10032755m.g Citrus clementina HOM05D006938 ORTHO05D008600 4.5e-46 188.7 210 51.9
Atru.chr11.1233 Acer truncatum HOM05D006938 ORTHO05D008600 2.9e-45 186.0 181 57.5
Atru.chr11.1321 Acer truncatum HOM05D006938 ORTHO05D008600 2.9e-45 186.0 181 57.5
Gohir.D11G002100 Gossypium hirsutum HOM05D006938 ORTHO05D008600 2.9e-45 186.0 208 56.2
Gorai.007G003100 Gossypium raimondii HOM05D006938 ORTHO05D008600 2.9e-45 186.0 191 58.1
QL03p043666 Quercus lobata HOM05D006938 ORTHO05D008600 3.8e-45 185.7 211 54.0
TWI53G1636 Tripterygium wilfordii HOM05D006938 ORTHO05D008600 2.5e-44 183.0 211 55.9
Glyma.20G172300 Glycine max HOM05D006938 ORTHO05D008600 3.2e-44 182.6 220 52.3
Gohir.A11G002500 Gossypium hirsutum HOM05D006938 ORTHO05D008600 1.2e-43 180.6 208 54.8
Glyma.10G219400 Glycine max HOM05D006938 ORTHO05D008600 2.7e-43 179.5 220 50.0
Eucgr.G00991 Eucalyptus grandis HOM05D006938 ORTHO05D008600 3.6e-43 179.1 196 54.1
Lalb_Chr03g0035761 Lupinus albus HOM05D006938 ORTHO05D008600 3.6e-43 179.1 207 51.7
Medtr1g097270 Medicago truncatula HOM05D006938 ORTHO05D008600 3.6e-43 179.1 215 50.7
Phvul.007G086000 Phaseolus vulgaris HOM05D006938 ORTHO05D008600 6.1e-43 178.3 220 49.5
Cpa.g.sc51.44 Carica papaya HOM05D006938 ORTHO05D008600 1.0e-42 177.6 176 58.0
CANSAT64G2234 Cannabis sativa HOM05D006938 ORTHO05D008600 2.3e-42 176.4 202 53.0
Lj6P721T41 Lonicera japonica HOM05D006938 ORTHO05D008600 3.0e-42 176.0 173 59.0
PGR142G2203 Punica granatum HOM05D006938 ORTHO05D008600 3.0e-42 176.0 209 53.1
CSS0018133 Camellia sinensis var. sinensis HOM05D006938 ORTHO05D008600 3.9e-42 175.6 173 56.6
Prupe.1G345500 Prunus persica HOM05D006938 ORTHO05D008600 5.1e-42 175.3 215 52.1
Hma1.2p1_0232F.1_g097690 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 8.8e-42 174.5 157 61.8
Aqoxy3G04277 Aquilegia oxysepala HOM05D006938 ORTHO05D008600 1.1e-41 174.1 192 54.7
ClCG09G005720 Citrullus lanatus HOM05D006938 ORTHO05D008600 1.1e-41 174.1 191 55.0
MELO3C015984.2 Cucumis melo HOM05D006938 ORTHO05D008600 1.5e-41 173.7 177 57.6
PGSC0003DMG400019837 Solanum tuberosum HOM05D006938 ORTHO05D008600 2.0e-41 173.3 178 56.7
Psat6g189200 Pisum sativum HOM05D006938 ORTHO05D008600 2.6e-41 172.9 211 51.2
RcHm_v2.0_Chr4g0446461 Rosa chinensis HOM05D006938 ORTHO05D008600 2.6e-41 172.9 207 53.1
HanXRQChr17g0540771 Helianthus annuus HOM05D006938 ORTHO05D008600 3.3e-41 172.6 207 54.6
Dinv17599 Davidia involucrata HOM05D006938 ORTHO05D008600 5.7e-41 171.8 197 52.8
Lj5g0002504 Lotus japonicus HOM05D006938 ORTHO05D008600 5.7e-41 171.8 215 49.3
MD13G1007500 Malus domestica HOM05D006938 ORTHO05D008600 5.7e-41 171.8 207 52.2
Nn4g24932 Nelumbo nucifera HOM05D006938 ORTHO05D008600 5.7e-41 171.8 203 50.7
TPR.G23154 Trifolium pratense HOM05D006938 ORTHO05D008600 7.4e-41 171.4 214 48.6
CiPaw.09G164200 Carya illinoinensis HOM05D006938 ORTHO05D008600 9.7e-41 171.0 142 65.5
CsaV3_7G029440 Cucumis sativus L. HOM05D006938 ORTHO05D008600 9.7e-41 171.0 177 57.6
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 1.3e-40 170.6 172 55.8
CAN.G157.8 Capsicum annuum HOM05D006938 ORTHO05D008600 1.7e-40 170.2 135 66.7
Cc07_g19080 Coffea canephora HOM05D006938 ORTHO05D008600 1.7e-40 170.2 177 55.4
ATR0618G369 Amborella trichopoda HOM05D006938 ORTHO05D008600 2.2e-40 169.9 115 79.1
vmacro22268 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.2e-40 169.9 122 71.3
vmacro22787 Vaccinium macrocarpon HOM05D006938 ORTHO05D008600 2.2e-40 169.9 122 71.3
MD16G1000600 Malus domestica HOM05D006938 ORTHO05D008600 2.8e-40 169.5 208 51.4
Nitab4.5_0002392g0050 Nicotiana tabacum HOM05D006938 ORTHO05D008600 2.8e-40 169.5 131 65.6
Oeu024662.1 Olea europaea HOM05D006938 ORTHO05D008600 2.8e-40 169.5 133 66.9
Ca_10639_v3 Cicer arietinum L. HOM05D006938 ORTHO05D008600 4.8e-40 168.7 223 47.1
Nitab4.5_0000139g0080 Nicotiana tabacum HOM05D006938 ORTHO05D008600 4.8e-40 168.7 131 64.9
Sopen02g005300 Solanum pennellii HOM05D006938 ORTHO05D008600 6.3e-40 168.3 174 57.5
Haze_11723 Corylus avellana HOM05D006938 ORTHO05D008600 8.2e-40 167.9 184 54.9
ECA246G5327 Erigeron canadensis HOM05D006938 ORTHO05D008600 8.2e-40 167.9 134 65.7
PSO478G3769 Papaver somniferum HOM05D006938 ORTHO05D008600 8.2e-40 167.9 202 50.5
SGA_v2.0_scaffold25G10864 Striga asiatica HOM05D006938 ORTHO05D008600 8.2e-40 167.9 108 79.6
SGA_v2.0_scaffold467G52037 Striga asiatica HOM05D006938 ORTHO05D008600 8.2e-40 167.9 168 58.3
Sed0026401 Sechium edule HOM05D006938 ORTHO05D008600 1.1e-39 167.5 183 55.2
Rhsim06G0126000 Rhododendron simsii HOM05D006938 ORTHO05D008600 1.8e-39 166.8 116 74.1
FvH4_4g36740 Fragaria vesca HOM05D006938 ORTHO05D008600 2.4e-39 166.4 136 65.4
FAN17G2681 Fragaria x ananassa HOM05D006938 ORTHO05D008600 2.4e-39 166.4 136 65.4
FAN12G4276 Fragaria x ananassa HOM05D006938 ORTHO05D008600 3.1e-39 166.0 207 52.7
Solyc02g021000.3 Solanum lycopersicum HOM05D006938 ORTHO05D008600 3.1e-39 166.0 174 57.5
Peaxi162Scf00363g00087 Petunia axillaris HOM05D006938 ORTHO05D008600 7.0e-39 164.9 219 47.5
Actinidia11174 Actinidia chinensis HOM05D006938 ORTHO05D008600 9.1e-39 164.5 118 70.3
AT5G36120 Arabidopsis thaliana HOM05D006938 ORTHO05D008600 1.6e-38 163.7 118 69.5
Sp7g06080 Schrenkiella parvula HOM05D006938 ORTHO05D008600 1.6e-38 163.7 109 75.2
BcaC08g44319 Brassica carinata HOM05D006938 ORTHO05D008600 2.6e-38 162.9 137 61.3
C06p17420 Brassica napus HOM05D006938 ORTHO05D008600 2.6e-38 162.9 137 61.3
BolC6t36937H Brassica oleracea HOM05D006938 ORTHO05D008600 2.6e-38 162.9 137 61.3
Thhalv10005006m.g Eutrema salsugineum HOM05D006938 ORTHO05D008600 2.6e-38 162.9 117 70.1
A05p16420 Brassica napus HOM05D006938 ORTHO05D008600 3.5e-38 162.5 114 71.9
MBI06_g36504_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 3.5e-38 162.5 158 55.7
THA.LOC104805738 Tarenaya hassleriana HOM05D006938 ORTHO05D008600 3.5e-38 162.5 206 49.5
AL7G45100 Arabidopsis lyrata HOM05D006938 ORTHO05D008600 4.5e-38 162.2 118 69.5
BcaB02g08043 Brassica carinata HOM05D006938 ORTHO05D008600 5.9e-38 161.8 114 71.9
GSVIVG01010180001 Vitis vinifera HOM05D006938 ORTHO05D008600 5.9e-38 161.8 105 77.1
Cfa008713 Carpinus fangiana HOM05D006938 ORTHO05D008600 7.7e-38 161.4 169 57.4
Oeu022179.1 Olea europaea HOM05D006938 ORTHO05D008600 7.7e-38 161.4 100 82.0
PSO017G4971 Papaver somniferum HOM05D006938 ORTHO05D008600 7.7e-38 161.4 187 51.9
Lsat_1_v5_gn_3_33800 Lactuca sativa HOM05D006938 ORTHO05D008600 1.3e-37 160.6 107 76.6
Hund24283 Selenicereus undatus HOM05D006938 ORTHO05D008600 3.8e-37 159.1 113 71.7
BraA05t20549Z Brassica rapa HOM05D006938 ORTHO05D008600 8.5e-37 157.9 118 68.6
Migut.I00065 Erythranthe guttata HOM05D006938 ORTHO05D008600 8.5e-37 157.9 104 74.0
RcHm_v2.0_Chr3g0449681 Rosa chinensis HOM05D006938 ORTHO05D008600 8.5e-37 157.9 105 75.2
Ah.01g012920 Amaranthus hybridus HOM05D006938 ORTHO05D008600 1.1e-36 157.5 115 68.7
Hma1.2p1_0499F.1_g166850 Hydrangea macrophylla HOM05D006938 ORTHO05D008600 1.1e-36 157.5 115 70.4
AUR62017669 Chenopodium quinoa HOM05D006938 ORTHO05D008600 1.5e-36 157.1 186 47.8
AUR62015206 Chenopodium quinoa HOM05D006938 ORTHO05D008600 2.5e-36 156.4 188 47.9
Carub.0007s3179 Capsella rubella HOM05D006938 ORTHO05D008600 3.2e-36 156.0 129 61.2
HPP92_002538 Vanilla planifolia HOM05D006938 ORTHO05D008600 4.2e-36 155.6 107 72.0
Sc20g0002200 Simmondsia chinensis HOM05D006938 ORTHO05D008600 5.5e-36 155.2 132 62.1
HPP92_002496 Vanilla planifolia HOM05D006938 ORTHO05D008600 1.6e-35 153.7 107 71.0
Aa31LG9G17890 Aethionema arabicum HOM05D006938 ORTHO05D008600 3.6e-35 152.5 137 59.9
Os01g0966200 Oryza sativa ssp. japonica HOM05D006938 ORTHO05D008600 2.6e-33 146.4 101 71.3
Sc10g0007070 Simmondsia chinensis HOM05D006938 ORTHO05D008600 3.3e-33 146.0 117 65.8
Zm00001eb362370 Zea mays HOM05D006938 ORTHO05D008600 1.3e-32 144.1 101 69.3
AagrBONN_evm.TU.Sc2ySwM_344.2773 Anthoceros agrestis HOM05D006938 ORTHO05D008600 2.7e-30 136.3 112 63.4
Pp3c10_19880 Physcomitrium patens HOM05D006938 ORTHO05D008600 3.5e-30 136.0 114 63.2
Mapoly0101s0070 Marchantia polymorpha HOM05D006938 ORTHO05D008600 5.9e-30 135.2 101 65.3
SEGI_34816 Sequoiadendron giganteum HOM05D006938 ORTHO05D008600 1.7e-29 133.7 106 63.2
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 2.9e-29 132.9 85 77.6
MCO16G496 Micromonas commoda HOM05D006938 ORTHO05D008600 3.7e-24 115.9 119 52.1
unitig_21.g20451 Utricularia gibba HOM05D006938 ORTHO05D008600 6.3e-24 115.2 70 77.1
MBI06_g34033_MAGBIO Magnolia biondii HOM05D006938 ORTHO05D008600 2.4e-23 113.2 77 72.7
Peaxi162Scf00818g00021 Petunia axillaris HOM05D006938 ORTHO05D008600 6.1e-19 98.6 135 43.0
Cre01.g052400 Chlamydomonas reinhardtii HOM05D006938 ORTHO05D008600 2.4e-15 86.7 94 47.9
CDE06G1837 Ceratophyllum demersum HOM05D006938 ORTHO05D008600 4.5e-14 82.4 55 72.7
CsaV3_4G025230 Cucumis sativus L. HOM05D006938 ORTHO05D008600 1.0e-13 81.3 63 68.3
EL10Ac9g22924 Beta vulgaris HOM05D006938 ORTHO05D008600 2.3e-13 80.1 42 83.3
PRCOL_00002779 Prasinoderma coloniale HOM05D006938 ORTHO05D008600 3.3e-12 76.3 74 51.4
Sc10g0007050 Simmondsia chinensis HOM05D006938 ORTHO05D008600 1.8e-10 70.5 61 55.7
Migut.I00066 Erythranthe guttata HOM05D006938 ORTHO05D008600 2.4e-07 60.1 44 61.4


User provided reference genes

Program Settings