Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G102900 Manihot esculenta HOM05D003020 ORTHO05D003226 1.3e-157 559.7 281 100.0
Manes.10G043600 Manihot esculenta HOM05D003020 ORTHO05D003226 2.2e-64 250.0 270 55.9
Potri.008G043300 Populus trichocarpa HOM05D003020 ORTHO05D003226 4.3e-44 182.6 246 47.2
Potri.010G218300 Populus trichocarpa HOM05D003020 ORTHO05D003226 1.2e-41 174.5 259 45.9
Sabra08G0029900 Salix brachista HOM05D003020 ORTHO05D003226 2.7e-38 163.3 263 43.0
Sabra10G0168900 Salix brachista HOM05D003020 ORTHO05D003226 2.7e-38 163.3 251 44.6
Sabra16G0321600 Salix brachista HOM05D003020 ORTHO05D003226 2.2e-32 143.7 221 44.8
Cpa.g.sc53.28 Carica papaya HOM05D003020 ORTHO05D003226 1.9e-31 140.6 244 38.1
Sabra16G0323200 Salix brachista HOM05D003020 ORTHO05D003226 3.2e-31 139.8 215 45.1
QL08p056680 Quercus lobata HOM05D003020 ORTHO05D003226 2.7e-30 136.7 295 36.9
CiPaw.07G071600 Carya illinoinensis HOM05D003020 ORTHO05D003226 5.1e-29 132.5 272 39.7
CiPaw.02G176000 Carya illinoinensis HOM05D003020 ORTHO05D003226 1.9e-28 130.6 267 37.1
Thecc.10G069300 Theobroma cacao HOM05D003020 ORTHO05D003226 1.2e-27 127.9 283 36.4
FAN10G0626 Fragaria x ananassa HOM05D003020 ORTHO05D003226 2.4e-26 123.6 266 36.8
Haze_16927 Corylus avellana HOM05D003020 ORTHO05D003226 4.0e-26 122.9 257 36.6
Prupe.2G217400 Prunus persica HOM05D003020 ORTHO05D003226 5.2e-26 122.5 266 38.0
FAN06G0496 Fragaria x ananassa HOM05D003020 ORTHO05D003226 6.9e-26 122.1 265 36.2
Manes.10G043500 Manihot esculenta HOM05D003020 ORTHO05D003226 1.5e-25 120.9 243 41.6
Cfa001601 Carpinus fangiana HOM05D003020 ORTHO05D003226 2.0e-25 120.6 261 36.8
FvH4_7g20070 Fragaria vesca HOM05D003020 ORTHO05D003226 2.6e-25 120.2 265 35.8
FAN03G1700 Fragaria x ananassa HOM05D003020 ORTHO05D003226 2.2e-24 117.1 267 35.6
Actinidia02961 Actinidia chinensis HOM05D003020 ORTHO05D003226 1.9e-23 114.0 251 35.9
TAR636G2901 Trochodendron aralioides HOM05D003020 ORTHO05D003226 5.4e-23 112.5 273 32.6
RcHm_v2.0_Chr1g0364021 Rosa chinensis HOM05D003020 ORTHO05D003226 9.3e-23 111.7 260 35.8
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.6e-22 110.9 271 35.4
Eucgr.J01114 Eucalyptus grandis HOM05D003020 ORTHO05D003226 2.7e-22 110.2 210 38.1
TAR383G0860 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.0e-21 108.2 256 34.4
Actinidia02960 Actinidia chinensis HOM05D003020 ORTHO05D003226 2.3e-21 107.1 238 35.3
Duzib106G1942 Durio zibethinus HOM05D003020 ORTHO05D003226 2.3e-21 107.1 267 34.8
Actinidia02963 Actinidia chinensis HOM05D003020 ORTHO05D003226 3.9e-21 106.3 208 39.4
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.1e-20 104.8 258 33.7
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.1e-20 104.8 268 34.0
FvH4_7g20060 Fragaria vesca HOM05D003020 ORTHO05D003226 1.5e-20 104.4 254 35.4
DCAR_019134 Daucus carota HOM05D003020 ORTHO05D003226 2.5e-20 103.6 247 33.6
FAN06G2932 Fragaria x ananassa HOM05D003020 ORTHO05D003226 3.3e-20 103.2 254 35.4
Atru.chr12.659 Acer truncatum HOM05D003020 ORTHO05D003226 4.3e-20 102.8 291 35.7
Atru.chr12.686 Acer truncatum HOM05D003020 ORTHO05D003226 4.3e-20 102.8 291 35.7
Gohir.A06G178400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 1.3e-19 101.3 254 33.1
TWI38G1817 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 1.6e-19 100.9 234 37.2
Gohir.D06G174600 Gossypium hirsutum HOM05D003020 ORTHO05D003226 4.8e-19 99.4 256 34.0
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 4.8e-19 99.4 256 32.4
Actinidia07721 Actinidia chinensis HOM05D003020 ORTHO05D003226 6.2e-19 99.0 255 33.7
Gorai.010G204300 Gossypium raimondii HOM05D003020 ORTHO05D003226 6.2e-19 99.0 257 33.5
Nn2g12774 Nelumbo nucifera HOM05D003020 ORTHO05D003226 6.2e-19 99.0 260 34.2
Hma1.2p1_0453F.1_g156030 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 1.1e-18 98.2 251 33.1
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.1e-18 98.2 264 34.5
CiPaw.01G275700 Carya illinoinensis HOM05D003020 ORTHO05D003226 1.4e-18 97.8 211 37.9
Dinv11798 Davidia involucrata HOM05D003020 ORTHO05D003226 1.4e-18 97.8 266 31.6
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.4e-18 97.8 268 35.4
FAN01G0050 Fragaria x ananassa HOM05D003020 ORTHO05D003226 2.4e-18 97.1 269 33.5
FAN01G2565 Fragaria x ananassa HOM05D003020 ORTHO05D003226 2.4e-18 97.1 269 33.5
Lj1C921T4 Lonicera japonica HOM05D003020 ORTHO05D003226 6.9e-18 95.5 215 34.9
Actinidia07720 Actinidia chinensis HOM05D000283 ORTHO05D003226 1.2e-17 94.7 198 36.4
Dinv31354 Davidia involucrata HOM05D003020 ORTHO05D003226 1.2e-17 94.7 241 32.4
MELO3C025508.2 Cucumis melo HOM05D003020 ORTHO05D003226 2.0e-17 94.0 259 33.6
SalBow4G1965 Salvia bowleyana HOM05D003020 ORTHO05D003226 2.0e-17 94.0 265 33.6
Rhsim09G0153600 Rhododendron simsii HOM05D003020 ORTHO05D003226 5.8e-17 92.4 205 36.1
Rhsim09G0153700 Rhododendron simsii HOM05D003020 ORTHO05D003226 5.8e-17 92.4 198 37.9
Rhsim09G0153800 Rhododendron simsii HOM05D003020 ORTHO05D003226 5.8e-17 92.4 194 35.6
Rhsim09G0153900 Rhododendron simsii HOM05D003020 ORTHO05D003226 9.9e-17 91.7 198 36.9
FAN10G4329 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.3e-16 91.3 227 35.2
Dinv31353 Davidia involucrata HOM05D003020 ORTHO05D003226 2.9e-16 90.1 282 31.6
ClCG09G020480 Citrullus lanatus HOM05D003020 ORTHO05D003226 1.1e-15 88.2 206 36.9
Sabra08G0029800 Salix brachista HOM05D031226 ORTHO05D037394 1.1e-15 88.2 263 33.5
CsaV3_5G025940 Cucumis sativus L. HOM05D003020 ORTHO05D003226 1.9e-15 87.4 218 34.4
Cfa013505 Carpinus fangiana HOM05D003020 ORTHO05D003226 7.1e-15 85.5 257 32.7
Glyma.10G213000 Glycine max HOM05D003020 ORTHO05D003226 2.1e-14 84.0 251 33.9
Duzib114G0319 Durio zibethinus HOM05D003020 ORTHO05D003226 3.5e-14 83.2 249 28.5
Haze_22098 Corylus avellana HOM05D003020 ORTHO05D003226 4.6e-14 82.8 257 31.5
COL.COLO4_23725 Corchorus olitorius HOM05D003020 ORTHO05D003226 7.9e-14 82.0 190 31.6
Cc02_g11380 Coffea canephora HOM05D003020 ORTHO05D003226 1.0e-13 81.6 286 28.7
Eucgr.J01120 Eucalyptus grandis HOM05D003020 ORTHO05D003226 1.0e-13 81.6 273 32.2
Oeu063752.1 Olea europaea HOM05D003020 ORTHO05D003226 1.0e-13 81.6 245 31.4
Ca_10586_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 1.3e-13 81.3 262 33.2
Lalb_Chr03g0036011 Lupinus albus HOM05D003020 ORTHO05D003226 1.3e-13 81.3 268 29.5
TPR.G16980 Trifolium pratense HOM05D003020 ORTHO05D003226 1.3e-13 81.3 266 33.5
VMungo0720G0200 Vigna mungo HOM05D003020 ORTHO05D003226 1.3e-13 81.3 252 33.7
Potri.010G218500 Populus trichocarpa HOM05D031226 ORTHO05D003226 3.0e-13 80.1 288 33.0
Sed0002867 Sechium edule HOM05D003020 ORTHO05D003226 3.9e-13 79.7 255 31.4
Aqoxy7G03070 Aquilegia oxysepala HOM05D003020 ORTHO05D003226 5.1e-13 79.3 271 34.7
Gorai.004G031500 Gossypium raimondii HOM05D003020 ORTHO05D003226 5.1e-13 79.3 245 29.0
MD16G1257900 Malus domestica HOM05D003020 ORTHO05D003226 5.1e-13 79.3 248 34.3
Peaxi162Scf00851g00012 Petunia axillaris HOM05D012114 ORTHO05D014153 6.7e-13 79.0 254 28.7
Phvul.007G092400 Phaseolus vulgaris HOM05D003020 ORTHO05D003226 8.7e-13 78.6 251 32.7
QL02p097728 Quercus lobata HOM05D003020 ORTHO05D003226 8.7e-13 78.6 279 31.2
Glyma.20G178000 Glycine max HOM05D003020 ORTHO05D003226 1.1e-12 78.2 258 33.3
Actinidia04141 Actinidia chinensis HOM05D003020 ORTHO05D003226 1.9e-12 77.4 254 28.3
ClCG06G013330 Citrullus lanatus HOM05D003020 ORTHO05D003226 1.9e-12 77.4 267 29.2
MELO3C017464.2 Cucumis melo HOM05D003020 ORTHO05D003226 1.9e-12 77.4 270 29.6
Migut.F01988 Erythranthe guttata HOM05D003020 ORTHO05D003226 1.9e-12 77.4 253 28.5
FAN17G2997 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.9e-12 77.4 271 31.4
FAN22G0428 Fragaria x ananassa HOM05D003020 ORTHO05D003226 3.3e-12 76.6 270 31.1
Oeu025224.1 Olea europaea HOM05D003020 ORTHO05D003226 3.3e-12 76.6 248 30.6
Thecc.09G173200 Theobroma cacao HOM05D003020 ORTHO05D003226 3.3e-12 76.6 261 33.0
Migut.F01762 Erythranthe guttata HOM05D003020 ORTHO05D003226 4.3e-12 76.3 212 33.0
Prupe.1G086100 Prunus persica HOM05D003020 ORTHO05D003226 5.6e-12 75.9 283 29.7
DCAR_015284 Daucus carota HOM05D003020 ORTHO05D003226 7.4e-12 75.5 251 29.1
Medtr1g095730 Medicago truncatula HOM05D003020 ORTHO05D003226 7.4e-12 75.5 254 32.7
TWI15G1220 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 7.4e-12 75.5 253 28.1
Lj1C921T2 Lonicera japonica HOM05D003020 ORTHO05D003226 9.6e-12 75.1 252 28.6
Lalb_Chr12g0199391 Lupinus albus HOM05D003020 ORTHO05D003226 9.6e-12 75.1 238 31.5
TPR.G1799 Trifolium pratense HOM05D003020 ORTHO05D003226 9.6e-12 75.1 263 33.1
FAN07G1960 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.3e-11 74.7 270 31.1
Rhsim09G0153500 Rhododendron simsii HOM05D003020 ORTHO05D003226 1.3e-11 74.7 199 32.2
Duzib170G0355 Durio zibethinus HOM05D003020 ORTHO05D003226 1.6e-11 74.3 255 29.0
Gohir.A08G023400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 1.6e-11 74.3 259 28.6
PSO170G3450 Papaver somniferum HOM05D003020 ORTHO05D003226 2.1e-11 73.9 292 28.1
CsaV3_1G031590 Cucumis sativus L. HOM05D003020 ORTHO05D003226 2.8e-11 73.6 275 28.4
Eucgr.J01115 Eucalyptus grandis HOM05D003020 ORTHO05D003226 2.8e-11 73.6 120 40.0
Medtr4g128160 Medicago truncatula HOM05D003020 ORTHO05D003226 2.8e-11 73.6 264 30.3
Oeu042166.1 Olea europaea HOM05D003020 ORTHO05D003226 2.8e-11 73.6 257 30.0
DCAR_017969 Daucus carota HOM05D003020 ORTHO05D003226 3.7e-11 73.2 258 29.8
Oeu004196.1 Olea europaea HOM05D003020 ORTHO05D003226 3.7e-11 73.2 256 32.0
FvH4_4g08220 Fragaria vesca HOM05D003020 ORTHO05D003226 4.8e-11 72.8 260 31.5
FAN12G0399 Fragaria x ananassa HOM05D003020 ORTHO05D003226 4.8e-11 72.8 260 31.5
Lsat_1_v5_gn_2_114020 Lactuca sativa HOM05D003020 ORTHO05D003226 4.8e-11 72.8 199 33.7
Lj1C921T3 Lonicera japonica HOM05D003020 ORTHO05D003226 4.8e-11 72.8 230 30.4
SalBow6G2220 Salvia bowleyana HOM05D003020 ORTHO05D003226 4.8e-11 72.8 248 29.4
Gohir.D08G033900 Gossypium hirsutum HOM05D003020 ORTHO05D003226 6.2e-11 72.4 242 28.5
RcHm_v2.0_Chr4g0402471 Rosa chinensis HOM05D003020 ORTHO05D003226 6.2e-11 72.4 246 32.5
Nitab4.5_0000534g0060 Nicotiana tabacum HOM05D003020 ORTHO05D003226 1.1e-10 71.6 270 30.0
MD13G1253900 Malus domestica HOM05D003020 ORTHO05D003226 1.4e-10 71.2 260 30.8
Dinv41250 Davidia involucrata HOM05D003020 ORTHO05D003226 2.4e-10 70.5 255 29.8
Gohir.A08G084400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 2.4e-10 70.5 260 30.0
Ciclev10033392m.g Citrus clementina HOM05D003020 ORTHO05D003226 5.3e-10 69.3 121 42.1
Hma1.2p1_1025F.1_g249270 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 5.3e-10 69.3 262 27.5
PGR044G1573 Punica granatum HOM05D003020 ORTHO05D003226 5.3e-10 69.3 252 31.7
Ca_21174_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 9.0e-10 68.6 262 33.2
Ca_21223_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 9.0e-10 68.6 262 33.2
CANSAT11G1249 Cannabis sativa HOM05D003020 ORTHO05D003226 1.2e-09 68.2 277 28.2
Nitab4.5_0000233g0300 Nicotiana tabacum HOM05D012114 ORTHO05D014153 1.2e-09 68.2 258 30.2
Cpa.g.sc95.49 Carica papaya HOM05D003020 ORTHO05D003226 1.5e-09 67.8 264 26.1
COL.COLO4_35897 Corchorus olitorius HOM05D003020 ORTHO05D003226 2.0e-09 67.4 249 30.5
PGR102G0964 Punica granatum HOM05D003020 ORTHO05D003226 2.0e-09 67.4 300 26.3
Glyma.17G063300 Glycine max HOM05D003020 ORTHO05D003226 3.4e-09 66.6 244 29.9
Lalb_Chr19g0129551 Lupinus albus HOM05D003020 ORTHO05D003226 3.4e-09 66.6 243 31.3
CiPaw.08G036400 Carya illinoinensis HOM05D003020 ORTHO05D003226 7.6e-09 65.5 247 27.5
Gohir.D08G094000 Gossypium hirsutum HOM05D003020 ORTHO05D003226 9.9e-09 65.1 267 27.7
PGR044G1634 Punica granatum HOM05D003020 ORTHO05D003226 9.9e-09 65.1 258 28.3
Duzib150G1089 Durio zibethinus HOM05D003020 ORTHO05D003226 1.3e-08 64.7 240 29.6
Sabra10G0169000 Salix brachista HOM05D031226 ORTHO05D037394 1.3e-08 64.7 259 29.3
Manes.14G153500 Manihot esculenta HOM05D003020 ORTHO05D003226 1.7e-08 64.3 250 28.4
Atru.chr7.633 Acer truncatum HOM05D003020 ORTHO05D003226 2.2e-08 63.9 248 28.6
Eucgr.C00156 Eucalyptus grandis HOM05D003020 ORTHO05D003226 2.9e-08 63.5 263 29.7
Nitab4.5_0000233g0290 Nicotiana tabacum HOM05D012114 ORTHO05D014153 2.9e-08 63.5 256 30.5
Glyma.20G083700 Glycine max HOM05D003020 ORTHO05D003226 3.8e-08 63.2 239 29.7
Manes.14G153300 Manihot esculenta HOM05D003020 ORTHO05D003226 3.8e-08 63.2 266 28.2
Psat0s2889g0080 Pisum sativum HOM05D003020 ORTHO05D003226 8.4e-08 62.0 264 31.4
VMungo1215G0012 Vigna mungo HOM05D003020 ORTHO05D003226 8.4e-08 62.0 252 29.0
Actinidia26625 Actinidia chinensis HOM05D003020 ORTHO05D003226 1.1e-07 61.6 90 43.3
CiPaw.05G049400 Carya illinoinensis HOM05D003020 ORTHO05D003226 1.4e-07 61.2 259 30.1
Lj4g0004544 Lotus japonicus HOM05D003020 ORTHO05D003226 1.4e-07 61.2 273 27.8
Lj1P920T18 Lonicera japonica HOM05D003020 ORTHO05D003226 1.9e-07 60.8 199 27.1
Sed0018084 Sechium edule HOM05D003020 ORTHO05D003226 1.9e-07 60.8 258 27.5
CiPaw.07G192300 Carya illinoinensis HOM05D003020 ORTHO05D003226 2.4e-07 60.5 285 28.1
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 2.4e-07 60.5 251 26.3
Migut.J01478 Erythranthe guttata HOM05D003020 ORTHO05D003226 2.4e-07 60.5 271 27.3
Lsat_1_v5_gn_2_113960 Lactuca sativa HOM05D030802 ORTHO05D003226 2.4e-07 60.5 243 28.8
Phvul.003G146000 Phaseolus vulgaris HOM05D003020 ORTHO05D003226 2.4e-07 60.5 269 30.1
Thecc.10G069600 Theobroma cacao HOM05D010162 ORTHO05D010383 2.4e-07 60.5 243 28.4
arahy.Tifrunner.gnm1.ann1.4MY83E Arachis hypogaea HOM05D003020 ORTHO05D003226 3.2e-07 60.1 263 30.0
Duzib168G2116 Durio zibethinus HOM05D003020 ORTHO05D003226 4.2e-07 59.7 258 28.3
Lsat_1_v5_gn_8_19121 Lactuca sativa HOM05D003020 ORTHO05D003226 4.2e-07 59.7 248 28.2
THA.LOC104803497 Tarenaya hassleriana HOM05D003020 ORTHO05D003226 4.2e-07 59.7 248 29.8
MBI14_g17368_MAGBIO Magnolia biondii HOM05D000283 ORTHO05D000358 5.5e-07 59.3 259 27.4
Lj5g0002057 Lotus japonicus HOM05D003020 ORTHO05D003226 9.3e-07 58.5 256 28.5
Nitab4.5_0000534g0070 Nicotiana tabacum HOM05D012114 ORTHO05D014153 9.3e-07 58.5 253 30.0
DCAR_014702 Daucus carota HOM05D003020 ORTHO05D003226 1.2e-06 58.2 268 25.7
Migut.K00242 Erythranthe guttata HOM05D003020 ORTHO05D003226 1.2e-06 58.2 281 27.4
Rhsim01G0004800 Rhododendron simsii HOM05D003020 ORTHO05D003226 1.6e-06 57.8 264 29.5
Dinv11799 Davidia involucrata HOM05D003020 ORTHO05D003226 2.1e-06 57.4 91 35.2
ECA233G4042 Erigeron canadensis HOM05D003020 ORTHO05D003226 2.7e-06 57.0 219 26.9
HanXRQChr08g0219501 Helianthus annuus HOM05D003020 ORTHO05D003226 2.7e-06 57.0 254 26.8
Nitab4.5_0000534g0080 Nicotiana tabacum HOM05D012114 ORTHO05D014153 2.7e-06 57.0 258 29.5
Lj9P685T21 Lonicera japonica HOM05D003020 ORTHO05D003226 3.5e-06 56.6 216 30.6
TWI63G1498 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 4.6e-06 56.2 261 26.4
CiPaw.01G275300 Carya illinoinensis HOM05D010935 ORTHO05D010383 6.0e-06 55.8 261 28.7


User provided reference genes

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