Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Manes.07G102502 Manihot esculenta HOM05D041989 ORTHO05D036634 3.5e-98 361.7 190 100.0
Manes.07G103400 Manihot esculenta HOM05D041989 ORTHO05D036634 2.0e-61 239.6 127 97.6
Dinv18544 Davidia involucrata HOM05D000538 ORTHO05D000614 5.9e-13 78.6 86 47.7
CSS0022087 Camellia sinensis var. sinensis HOM05D000538 ORTHO05D000614 6.5e-12 75.1 90 42.2
Cpa.g.sc8.251 Carica papaya HOM05D000538 ORTHO05D000614 6.5e-12 75.1 100 39.0
SalBow1G6852 Salvia bowleyana HOM05D000538 ORTHO05D000614 1.2e-10 70.9 88 40.9
Nn1g03728 Nelumbo nucifera HOM05D000538 ORTHO05D000614 1.6e-10 70.5 89 41.6
Dinv10905 Davidia involucrata HOM05D000538 ORTHO05D000614 3.6e-10 69.3 95 44.2
RcHm_v2.0_Chr2g0160351 Rosa chinensis HOM05D000538 ORTHO05D000614 4.7e-10 68.9 81 43.2
Actinidia24277 Actinidia chinensis HOM05D000538 ORTHO05D000614 1.0e-09 67.8 71 46.5
MSTRG.14159 Avicennia marina HOM05D000538 ORTHO05D000614 2.3e-09 66.6 82 42.7
Nn4g26474 Nelumbo nucifera HOM05D000538 ORTHO05D000614 6.7e-09 65.1 87 41.4
Lj8P121T27 Lonicera japonica HOM05D000538 ORTHO05D000614 2.0e-08 63.5 125 33.6
Rhsim06G0156300 Rhododendron simsii HOM05D000538 ORTHO05D000614 2.6e-08 63.2 77 41.6
Hma1.2p1_0613F.1_g189370 Hydrangea macrophylla HOM05D000538 ORTHO05D000614 4.4e-08 62.4 105 41.0
TAR629G2738 Trochodendron aralioides HOM05D000538 ORTHO05D000614 7.4e-08 61.6 122 36.1
Migut.H01208 Erythranthe guttata HOM05D000538 ORTHO05D000614 9.7e-08 61.2 94 37.2
MD09G1103400 Malus domestica HOM05D000538 ORTHO05D000614 2.8e-07 59.7 103 34.0
Rhsim11G0026100 Rhododendron simsii HOM05D000538 ORTHO05D000614 2.8e-07 59.7 89 40.4
Prupe.3G222100 Prunus persica HOM05D000538 ORTHO05D000614 4.8e-07 58.9 83 41.0
MELO3C018793.2 Cucumis melo HOM05D000538 ORTHO05D000614 6.3e-07 58.5 90 36.7
ClCG02G001630 Citrullus lanatus HOM05D000538 ORTHO05D000614 8.2e-07 58.2 103 32.0
FvH4_6g43700 Fragaria vesca HOM05D000538 ORTHO05D000614 8.2e-07 58.2 83 41.0
FAN14G0602 Fragaria x ananassa HOM05D000538 ORTHO05D000614 8.2e-07 58.2 83 41.0
Sed0007057 Sechium edule HOM05D000538 ORTHO05D000614 8.2e-07 58.2 100 37.0
Nitab4.5_0001134g0160 Nicotiana tabacum HOM05D000538 ORTHO05D000614 1.4e-06 57.4 77 42.9
Sed0002193 Sechium edule HOM05D000538 ORTHO05D000614 1.4e-06 57.4 126 31.7
TAR627G0243 Trochodendron aralioides HOM05D000538 ORTHO05D000614 1.4e-06 57.4 85 43.5
Dinv22316 Davidia involucrata HOM05D000359 ORTHO05D000251 2.4e-06 56.6 106 38.7
Rhsim12G0055700 Rhododendron simsii HOM05D041989 ORTHO05D036634 2.4e-06 56.6 88 39.8
Dinv20713 Davidia involucrata HOM05D000538 ORTHO05D000614 4.1e-06 55.8 82 42.7
Nitab4.5_0003429g0050 Nicotiana tabacum HOM05D000538 ORTHO05D000614 4.1e-06 55.8 78 42.3
Rhsim11G0026600 Rhododendron simsii HOM05D000538 ORTHO05D000614 4.1e-06 55.8 116 32.8
FAN02G3464 Fragaria x ananassa HOM05D000538 ORTHO05D000614 5.3e-06 55.5 83 39.8
Rhsim11G0032500 Rhododendron simsii HOM05D000538 ORTHO05D000614 7.0e-06 55.1 77 37.7
RhsimUnG0059200 Rhododendron simsii HOM05D000538 ORTHO05D000614 7.0e-06 55.1 77 37.7


User provided reference genes

Program Settings